New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4014293 =	41 (0.780)	3 (0.060)	3/236	NT	6.7%	intergenic (‑134/‑35)	PP_3541/PP_3542	MgtC family transporter/hypothetical protein
	?	NC_002947	4014323 =	44 (0.870)					intergenic (‑164/‑5)	PP_3541/PP_3542	MgtC family transporter/hypothetical protein

CTTGAGCTTTATGAATCCGCCTGCCACGTCAGAGGCCTGCCCTATGCAAGGTTGACCGTCACACGTACTGCAAAGTGCCGCTCAGCTTGCTGATGCAGCAACTGGCCCCTGACCGTGGTCCACCCTG‑‑TAATCACCCCGGGAGGACCCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTGCGCATCGAGGGCGAAGGCCCAGACATCGAGATCATCACCGACGAGCAGTTGCGCATGTCGGTGGCCGTACTGGCCGGCCAACGCGTGC  >  NC_002947/4014177‑4014472                                                                                                                                                     |                                                                                                                                                      cTTGAGCTTTATGAATCCGCCTGCCACGTCAGAGGCCTGCCCTATGCAAGGTTGACCGTCACACGTACTGCAAAGTGCCGCTCAGCTTGCTGATGCAGCAACTGGCCCCTGACCGTGGTCGGGCGTG‑‑TAATCACCCCGGGAGGACCccac                                                                                                                                                    <  1:398060/150‑1 (MQ=255)           aTGAATCCGCCTGCCACGTCAGAGGCCTGCCCTATGCAAGGTTGACCGTCACACGTACTGCAAAGTGCCGCTCAGCTTGCTGATGCAGCAACTGGCCCCTGACCGTGGTCCACCCTG‑‑TAATCACCCCGGGAGGACCCCACCATGCCCAtt                                                                                                                                          <  2:1169516/150‑1 (MQ=255)            tGAATCCGCCTGCCACGTCAGAGGCCTGCCCTATGCAAGGTTGACCGTCACACGTACTGCAAAGTGCCGCTCAGCTTGCTGATGCAGCAACTGGCCCCTGACCGTGGTCCACCCTG‑‑TAATCACCCCGGGAGGACCCCACCATGCCCATTg                                                                                                                                         >  1:1137081/1‑150 (MQ=255)              aaTCCGCCTGCCACGTCAGAGGCCTGCCCTATGCAAGGTTGACCGTCACACGTACTGCAAAGTGCCGCTCAGCTTGCTGATGCAGCAACTGGCCCCTGACCGTGGTCCACCCTG‑‑TAATCACCCCGGGAGGACCCCACCATGCCCATTGaa                                                                                                                                       >  1:1139455/1‑150 (MQ=255)               tgaaagcTGCCACGTCAGAGGCCTGCCCTATGCAAGGTTGACCGTCACACGTACTGCAAAGTGCCGCTCAGCTTGCTGATGCAGCAACTGGCCCCTGACCGTGGTCCACCCTG‑‑TAATCACCCCGGGAGGACCCCACCATGCCCATTGAAg                                                                                                                                      >  2:741572/7‑150 (MQ=255)                tcggtgatgatctcgatgtctgggccttcgccctcgatgcgcaggtcttcgccgatcagcgtgcagcggcgggtggtttcgtcgacttcaatgggcatggtggggtccaccctgtaatcaccccgggaggaccCCACCATGCCCATTGaa                                                                                                                                       <  1:1222756‑M2/17‑1 (MQ=255)                   gCCTGCCACGTCAGAGGCCTGCCCTATGCAAGGTTGACCGTCACACGTACTGCAAAGTGCCGCTCAGCTTGCTGATGCAGCAACTGGTCCCTGACCGTGGTCCACCCTG‑‑TAATCACCCCGGGAGGACCCCACCATGCCCATTGAAGTcga                                                                                                                                  <  2:338860/150‑1 (MQ=255)                   gCCTGCCACGTCAGAGGCCTGCCCTATGCAAGGTTGACCGTCACACGTACTGCAAAGTGCCGCTCAGCTTGCTGATGCAGCAACTGGCCCCTGACCGTGGTCCACCCTG‑‑TAATCACCCCGGGAGGACCCCACCATGCCCATTGAAGTcga                                                                                                                                  <  2:1137081/150‑1 (MQ=255)                       gCCACGTCAGAGGCCTGCCCTATGCAAGGTTGACCGTCACACGTACTGCAAAGTGCCGCTCAGCTTGCTGATGCAGCAACTGGCCCCTGACCGTGGTCCACCCTG‑‑TAATCACCCCGGGAGGACCCCACCATGCCCATTGAAGTCGACGaa                                                                                                                              >  1:906993/1‑150 (MQ=255)                           cgatgtctgggccttcgccctcgatgcgcaggtcttcgccgatcagcgtgcagcggcgggtggtttcgtcgacttcaatgggcatggtggGGTCCACCCTG‑‑TAATCACCCCGGGAGGACCcca                                                                                                                                                     <  1:1054140‑M1/33‑1 (MQ=255)                           cgatgtctgggccttcgccctcgatgcgcaggtcttcgccgatcagcgtgcagcggcgggtggtttcgtcgacttcaatgggcatggtggGGTCCACCCTG‑‑TAATCACCCCGGGAGGACCcca                                                                                                                                                     >  2:1054140‑M1/91‑123 (MQ=255)                             tCAGAGGCCTGCCCTATGCAAGGTTGACCGTCACACGTACTGCAAAGTGCCGCTCAGCTTGCTGATGCAGCAACTGGCCCCTGACCGTGGTCCACCCTG‑‑TAATCACCCCGGGAGGACCCCACCATGCCCATTGAAGTCGACGAAaccacc                                                                                                                        >  2:399176/1‑150 (MQ=255)                                   gCCTGCCCTATGCAAGGTTGACCGTCACACGTACTGCAAAGTGCCGCTCAGCTTGCTGATGCAGCAACTGGCCCCTGACCGTGGTCCACCCTG‑‑TAATCACCCCGGGAGGACCCCACCATGCCCATTGAAGTCGACGAAACCACCcgccgc                                                                                                                  >  2:34694/1‑150 (MQ=255)                                        cccTATGCAAGGTTGACCGTCACACGTACTGCAAAGTGCCGCTCAGCTTGCTGATGCAGCAACTGGCCCCTGACCGTGGTCCACCCTG‑‑TAATCACCCCGGGAGGAccc                                                                                                                                                       <  1:59394/108‑1 (MQ=255)                                        cccTATGCAAGGTTGACCGTCACACGTACTGCAAAGTGCCGCTCAGCTTGCTGATGCAGCAACTGGCCCCTGACCGTGGTCCACCCTG‑‑TAATCACCCCGGGAGGAccc                                                                                                                                                       >  2:59394/1‑108 (MQ=255)                                                  ggTTGACCGTCACACGTACTGCAAAGTGCCGCTCAGCTTGCTGATGCAGCAACTGGCCCCTGACCGTGCTCTACCCTG‑‑TAATCACCCCGGGAGGACCCCACCATGCCCAATGATCTCGACGAAACCACCCGCCGCTGCACGCTGAGCGGc                                                                                                   <  1:473451/150‑1 (MQ=255)                                                   gTTGACCGTCACACGTACTGCAAAGTGCCGCTCAGCTTGCTGATGCAGCAACTGGCCCCTGACCGTGGTCCACCCTG‑‑TAATCACCCCGGGAGGACCCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCg                                                                                                  >  2:1212580/1‑150 (MQ=255)                                                     tGACCGTCACACGTACTGCAAAGTGCCGCTCAGCTTGCTGATGCAGCAACTGGCCCCTGACCGTGGTCCACCCTG‑‑TAATCACCCCGGGAGGACCCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCgca                                                                                                <  1:1395149/150‑3 (MQ=255)                                                               acGTACTGCAAAGTGCCGCTCAGCTTGCTGATGCAGCAACTGGCCCCTGACCGTGGTCCACCCTG‑‑TAATCACCCCGGGAGGACCCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTGCGCa                                                                                      >  1:150536/1‑150 (MQ=255)                                                                 gTACTGCAAAGTGCCGCTCAGCTTGCTGATGCAGCAACTGGCCCCTGACCGTGGTCCACCCTG‑‑TAATCACCCCGGGAGGACCCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTGCGCATc                                                                                    >  2:798970/1‑150 (MQ=255)                                                                   aCTGCAAAGTGCCGCTCAGCTTGCTGATGCAGCAACTGGCCCCTGACCGTGGTCCACCCTG‑‑TAATCACCCCGGGAGGACCCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTGCGCATCGa                                                                                  <  2:906993/150‑1 (MQ=255)                                                                      gCAAAGTGCCGCTCAGCTTGCTGATGCAGCAACTGGCCCCTGACCGTGGTCCACCCTG‑‑TAATCACCCCGGGAGGACCCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTAATCGGCGAAGACCTGCGCATCGAggg                                                                               <  1:399176/150‑1 (MQ=255)                                                                           gTGCCTCTCAGCTCGCTGATGCACCAACTGGCCCCTGACCGTGGTCCACCCTG‑‑TAATCACCCCGGGAGGACCCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTCCACGCTGATCGGCGAAGACCTGCGCATCGAGGGCGAAg                                                                          <  2:444821/150‑1 (MQ=255)                                                                              ccGCTCAGCTTGCTGATGCAGCAACTGGCCCCTGACCGTGGTCCACCCTG‑‑TAATCACCCCGGGAGGACCCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGAc                                                                                             >  1:214193/1‑128 (MQ=255)                                                                              ccGCTCAGCTTGCTGATGCAGCAACTGGCCCCTGACCGTGGTCCACCCTG‑‑TAATCACCCCGGGAGGACCCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGAc                                                                                             <  2:214193/128‑1 (MQ=255)                                                                              ccGCTCAGCTTGCTGATGCAGCAACTGGCCCCTGACCGTGGTCCACCCTG‑‑TAATCACCCCGGGAGGACCCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTGCGCATCGAGGGCGAAGGcc                                                                       <  2:208986/150‑1 (MQ=255)                                                                                gCTCAGCTTGCTGATGCAGCAACTGGCCCCTGACCGTGGTCCACCCTG‑‑TAATCACCCCGGGAGGACCCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTgc                                                                                         >  2:579253/1‑130 (MQ=255)                                                                                gCTCAGCTTGCTGATGCAGCAACTGGCCCCTGACCGTGGTCCACCCTG‑‑TAATCACCCCGGGAGGACCCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTgc                                                                                         <  1:579253/130‑1 (MQ=255)                                                                                 cTCAGCTTGCTGATGCAGCAACTGGCCCCTGACCGTGGTCCACCCTG‑‑TAATCACCCCGGGAGGACCCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTGCGCATCGAGGGCGAAGCCCCAg                                                                    >  2:1011731/1‑150 (MQ=255)                                                                                    aGCTTGCTGATGCAGCAACTGGCCCCTGACCGTGGTCCACCCTG‑‑TAATCACCCCGGGAGGACCCCACCATGCCCATTGAAGTc                                                                                                                                    >  1:648826/1‑83 (MQ=255)                                                                                    aGCTTGCTGATGCAGCAACTGGCCCCTGACCGTGGTCCACCCTG‑‑TAATCACCCCGGGAGGACCCCACCATGCCCATTGAAGTc                                                                                                                                    <  2:648826/83‑1 (MQ=255)                                                                                                  gcaACTGGCCCCTGACCGTGGTCCACCCTG‑‑TAATCACCCCGGGAGGACCCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTGCGCATCGAGGGCGAAGGCCCAGACATCGAGATCATCAcc                                                   <  1:368374/150‑1 (MQ=255)                                                                                                    ttcaatgggcatggtggGGTCCTCCCGGGGTGATTACA‑‑GGGTGGACCCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTGCGCATCGAGGGCGAAGGCCCAGACATCGAGATCATCACcga                                                 <  1:1222756‑M1/133‑1 (MQ=255)                                                                                                       tGGCCCCTGACCGTGGTCCACCCTG‑‑TAATCACCCCGGGAGGACCCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTGCGCATCGAGGGCGAAGGCCCAGACATCGAGATCATCACcgacga                                              >  2:554725/1‑150 (MQ=255)                                                                                                        ggCCCCTGACCGTGGTCCACCCTG‑‑TAATCACCCCGGGAGGACCCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTGCGCATCGAGGGCGAAGGCCCAGACATCGAGATCATCACCGACGAg                                             <  1:34694/150‑1 (MQ=255)                                                                                                           cccTGACCGTCGTCCACCCTG‑‑TAATCACCCCGGGACGACCCCACCATGCCCATTGAAGCCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGTCCTGCGCATCGAGGGCGAAGGCCCAGACATCGAGATCATCACCGACGAGCAg                                          <  1:589794/150‑1 (MQ=255)                                                                                                               gACCGTGGTCCACCCTG‑‑TAATCACCCCGGGAGGACCCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTGCGCATCGAGGGCGAAGGCCCAGACATCGAGATCATCACCGACGAGCAGTTgc                                      <  2:150536/150‑1 (MQ=255)                                                                                                                    tggggtcctcccggggtgattacagggtggaccCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTGCGCATCGAGGGCGAAGGCCCAGACATCg                                                              <  1:1054140‑M2/90‑1 (MQ=255)                                                                                                                    tggggtcctcccggggtgattacagggtggaccCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTGCGCATCGAGGGCGAAGGCCCAGACATCg                                                              >  2:1054140‑M2/34‑123 (MQ=255)                                                                                                                    tGGTCCACCCTG‑‑TAATCACCCCGGGAGGACCCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTGCGCATCGAGGGCGAAGGCCCAGACATCGAGATCATCACCGACGAGCAGTTGCGCATg                                 >  2:340256/1‑150 (MQ=255)                                                                                                                         CACCCTG‑‑TAATCACCCCGGGAGGACCCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTGCGCATCGAGGGCGAAGGCCCAGACATCGAGATCATCACCGACGAGCAGTTGCGCATGTCGGt                            <  2:342600‑M1/150‑1 (MQ=255)                                                                                                                          aCCCTG‑‑TAATCACCCCGGGAGGACCCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTGCGCATCGAGGGCGAAGGCCCAGACATCGAGATCATCACCGACGAGCAGTTGCGCATGTCGGTg                           >  2:1112094/1‑150 (MQ=255)                                                                                                                             cTG‑‑TAATCACCCCGGGAGGACCCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTGCGCATCGAGGGCGAAGGCCCAGACATCGAGATCATCACCGACGAGCAGTTGCGCATGTCGGTGGcc                        <  1:340256/150‑1 (MQ=255)                                                                                                                                   aaTCACCCCGGGAGGACCCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTGCGCATCGAGGGCGAAGGCCCAGACATCGAGATCATCACCGACGAGCAGTTGCGCATGTCGGTGGCCGTAc                    <  1:1112094/150‑1 (MQ=255)                                                                                                                                    aTCACCCCGGGAGGACCCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTGCGCATCGAGGGCGAAGGCCCa                                                                     >  2:942122/1‑100 (MQ=255)                                                                                                                                    aTCACCCCGGGAGGACCCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTGCGCATCGAGGGCGAAGGCCCa                                                                     <  1:942122/100‑1 (MQ=255)                                                                                                                                       aCCCCGGGAGGACCCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTGCGCATCGAGGGCGAAGGCCCAGACATCGAGATCATCACCGACGAGCAGTTGCGCATGTCGGTGGCCGTACTggc                >  2:557931/1‑150 (MQ=255)                                                                                                                                        ccccGGGAGGACCCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTGCGCATCGAGGGCGAAGGCCCAGACATCGAGATCATCACCGACGAGCAGTTGCGCATGTCGGTGGCCGTACTggcc               >  1:496175/1‑150 (MQ=255)                                                                                                                                         cccGGGAGGACCCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTGCGCATCGAGGGCGAAGGCCCAGACATCGAGATCATCACCGACGAGCAGTTgc                                      >  2:1173314/1‑126 (MQ=255)                                                                                                                                         cccGGGAGGACCCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTGCGCATCGAGGGCGAAGGCCCAGACATCGAGATCATCACCGACGAGCAGTTgc                                      <  1:1173314/126‑1 (MQ=255)                                                                                                                                         cccGGGAGGACCCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTGCGCATCGAGGGCGAAGGCCCAGACATCGAGATCATCACCGACGAGCAGTTGCGCATGTCGGTGGCCg                       >  2:202403/1‑141 (MQ=255)                                                                                                                                         cccGGGAGGACCCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTGCGCATCGAGGGCGAAGGCCCAGACATCGAGATCATCACCGACGAGCAGTTGCGCATGTCGGTGGCCg                       <  1:202403/141‑1 (MQ=255)                                                                                                                                         cccGGGAGGACCCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTGCGCATCGAGGGCGAAGGCCCAGACATCGAGATCATCACCGACGAGCAGTTGCGCATGTCGGTGGCCGTACTggccg              >  2:1240246/1‑150 (MQ=255)                                                                                                                                         cccGGGAGGACCCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTGCGCATCGAGGGCGAAGGCCCAGACATCGAGATCATCACCGACGAGCAGTTGCGCATGTCGGTGGCCGTACTggccg              >  2:681181/1‑150 (MQ=255)                                                                                                                                                 gaccCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTGCGCATCGAGGGCGAAGGCCCAGACATCGAGATCATCACCGACGAGCAGTTGCGCATGTCGGTGGCCGTACTGGCCGGCCAAcgc      >  1:3428‑M2/5‑150 (MQ=255)                                                                                                                                                   ccCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTGCGCATCGAGGGCGAAGGCCCAGACATCGAGCTCATCACCGACGAGCAGTTGCGCATGTCGGTGGCCGTACTggccg              <  1:1039725‑M2/138‑1 (MQ=255)                                                                                                                                                   ccCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTGCGCATCGAGGGCGAAGGCCCAGACATCGAGATCATCACCGACGAGCAGTTGCGCATGTCGGTGGCCGTACTggccg              >  2:1039725‑M2/3‑140 (MQ=255)                                                                                                                                                   ccCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTGCGCATCGAGGGCGAAGGCCCAGACATCGAGATCATCACCGACGAGCAGTTGCGCATGTCGGTGGCCGTACTGGCCGGCCAACGCGt    >  2:879630‑M2/3‑150 (MQ=255)                                                                                                                                                    cCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTGCGCATCGAGGGCGAAGGCCCAGACATCGAGATCATCACCGACGAGCAGTTGCGCATGTCGGTGGCCGTACTg                  <  1:697222‑M2/134‑1 (MQ=255)                                                                                                                                                    cCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTGCGCATCGAGGGCGAAGGCCCAGACATCGAGATCATCACCGACGAGCAGTTGCGCATGTCGGTGGCCGTACTg                  >  2:697222‑M2/2‑135 (MQ=255)                                                                                                                                                    cCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTGCGCATCGAGGGCGAAGGCCCAGACATCGAGATCATCACCGACGAGCAGTTGCGCATGTCGGTGGCCGTACTGGCCGGCCAACGCGTg   >  1:40417‑M2/2‑150 (MQ=255)                                                                                                                                                     ccaccaTGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTGTGCATCGAGGGCGAAGGCCCAGACATCGAGATCATCACCGACGAGCAGTTGCGCATGTCGGTGGCCGTACTGGCCGGCCAACGCGTGc  <  2:3428/150‑1 (MQ=255)                                                                                                                                                     ccaccaTGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTGCGCATCGAGGGCGAAGGCCCAGACATCGAGATCATCACCGACGAGCAGTTGCGCATGTCGGTGGCCGTACTGGCCGGCCAACGCGTGc  <  2:1139455/150‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                      CTTGAGCTTTATGAATCCGCCTGCCACGTCAGAGGCCTGCCCTATGCAAGGTTGACCGTCACACGTACTGCAAAGTGCCGCTCAGCTTGCTGATGCAGCAACTGGCCCCTGACCGTGGTCCACCCTG‑‑TAATCACCCCGGGAGGACCCCACCATGCCCATTGAAGTCGACGAAACCACCCGCCGCTGCACGCTGATCGGCGAAGACCTGCGCATCGAGGGCGAAGGCCCAGACATCGAGATCATCACCGACGAGCAGTTGCGCATGTCGGTGGCCGTACTGGCCGGCCAACGCGTGC  >  NC_002947/4014177‑4014472

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.