New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5978514 =	65 (1.240)	3 (0.060)	3/238	NT	4.7%	coding (659/993 nt)	PP_5241	LuxR family transcriptional regulator
	?	NC_002947	5978543 =	58 (1.140)					coding (630/993 nt)	PP_5241	LuxR family transcriptional regulator
Rejected: Frequency below/above cutoff threshold.

TACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTCCAGGCCACTTGTGCCAGGCAAGTGCATGTCCAGCAGCAGGCAGGCACAGGGGGTTTCCAGGCGGGCCTC  >  NC_002947/5978394‑5978689                                                                                                                                                      |                                                                                                                                                   tACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAGATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTc                                                                                                                                                    <  2:968142/150‑1 (MQ=255)  aCTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAAATGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCa                                                                                                                                                   >  2:754877/1‑150 (MQ=255)    ttttCCTCGACCTGCCGCGCCTTCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATc                                                                                                                                                 >  1:706903/1‑150 (MQ=255)    ttttCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATc                                                                                                                                                 >  1:745167/1‑150 (MQ=255)    ttttCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATc                                                                                                                                                 >  2:1036447/1‑150 (MQ=255)        tgctggacatgcacttgcctggcacaagtggcctggaggtacaggatgcgctgtgccggctggcgctgccctggccgatcgtgttcatgactggtttcggcaccatcccgatgACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGa                                                                                                                                             >  1:1099964‑M1/114‑150 (MQ=255)         cTCGACCTGCCGCGCCTTCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGAt                                                                                                                                            <  2:706903/150‑1 (MQ=255)         cTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGAt                                                                                                                                            >  2:1381906/1‑150 (MQ=255)          tCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATg                                                                                                                                           >  2:470570/1‑150 (MQ=255)           cGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATgg                                                                                                                                          >  2:955718/1‑150 (MQ=255)              ccTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGc                                                                                                                                       >  2:758414/1‑150 (MQ=255)              ccTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGc                                                                                                                                       <  2:745167/150‑1 (MQ=255)                  ccGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGGAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGaa                                                                                                                                   >  1:1101486/1‑150 (MQ=255)                        cTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGt                                                                                                                             >  2:509807/1‑150 (MQ=255)                           cAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCTCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCAt                                                                                                                          <  1:563374/150‑1 (MQ=255)                           cAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCAt                                                                                                                          >  2:809027/1‑150 (MQ=255)                              ccACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGaa                                                                                                                       <  2:89345/150‑1 (MQ=255)                                     tgGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATc                                                                                                                <  1:509807/150‑1 (MQ=255)                                           tCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGTTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAg                                                                                                          <  1:683318/150‑1 (MQ=255)                                              gCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATCCCACCGCCCCGGCGCGCATGGCCTGGATCGTCATCGGGATGGTGCCGAAACCAGTCATGAACCCGATCGGCCAGGGc                                                                                                       <  1:1039151/150‑1 (MQ=255)                                               ccACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCa                                                                                                      >  2:488778/1‑150 (MQ=255)                                               ccACGGCCCGGGCGCGCACCGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGGGCCGAAACCAGTCATGAACACGATCGGCCAGGGCa                                                                                                      <  2:1100538/150‑1 (MQ=255)                                                            gcgcACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGc                                                                                              >  2:1266482/1‑145 (MQ=255)                                                            gcgcACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGc                                                                                              <  1:1266482/145‑1 (MQ=255)                                                                aCTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAgc                                                                                     <  2:880788/150‑1 (MQ=255)                                                                     cTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACTCGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATc                                                                                <  1:1151253/150‑1 (MQ=255)                                                                     cTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATc                                                                                <  2:9003/150‑1 (MQ=255)                                                                     cTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATc                                                                                <  1:581584/150‑1 (MQ=255)                                                                      tGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATcc                                                                               >  2:1207453/1‑150 (MQ=255)                                                                      tGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATc                                                                                <  2:233851/149‑1 (MQ=255)                                                                      tGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATc                                                                                >  1:233851/1‑149 (MQ=255)                                                                          aCAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTa                                                                           >  2:720568/1‑150 (MQ=255)                                                                          aCAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTa                                                                           <  1:1036447/150‑1 (MQ=255)                                                                              ggTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTc                                                                       >  1:757093/1‑150 (MQ=255)                                                                              ggTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTc                                                                       >  1:1207341/1‑150 (MQ=255)                                                                              ggTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTc                                                                       >  2:179590/1‑150 (MQ=255)                                                                                tCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTCCa                                                                     >  1:637220/1‑150 (MQ=255)                                                                                 cAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTCCAg                                                                    <  1:1333411/150‑1 (MQ=255)                                                                                      aCTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTcc                                                                      >  1:333169/1‑143 (MQ=255)                                                                                      aCTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTcc                                                                      <  2:333169/143‑1 (MQ=255)                                                                                        tGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTCCAGGCCACtt                                                             <  1:809027/150‑1 (MQ=255)                                                                                              tCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTCCAGGCCACTTGTGCCa                                                       <  2:637220/150‑1 (MQ=255)                                                                                               cATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCAGCAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGACCATCCTTTACCTCCAGACCACTTGTGCCAg                                                      >  1:41862/1‑150 (MQ=255)                                                                                                aTCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTCCAGGCCACTTGTGCCAgg                                                     >  1:69666/1‑150 (MQ=255)                                                                                                 tCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTCCAGGCCACTTGTGCCAGGc                                                    >  2:135937/1‑150 (MQ=255)                                                                                                   gAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTCCAGGCCACTTGTGCCAGGCaa                                                  >  1:478191/1‑150 (MQ=255)                                                                                                    aaCGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATCGACTGCAAGACGCTCGGCATGGTGCCGAAACCAGTTATGAACACAATCGGCCAATTCGGCTGGGGCCGGCACAGCGCATCCTGTACCTCCAGGCCACTTGTGCCAGGCAAg                                                 >  1:1097030/1‑150 (MQ=255)                                                                                                     aCGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTCCAGGCCACTTGTGCCAGGCAAGt                                                <  1:754877/150‑1 (MQ=255)                                                                                                       ggCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTCCAGGCCACTTGTGCCAGGCAAGTGc                                              <  1:745822/150‑1 (MQ=255)                                                                                                        gCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTCCAGGCCACTTGTGCCAGGCAAGTGCa                                             >  2:68125/1‑150 (MQ=255)                                                                                                         cTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTCCAGGCCACTTGTGCCAGGCAAGTGCAt                                            <  1:488778/150‑1 (MQ=255)                                                                                                         cTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGACCTGGGCGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTCCAGGCCACTTGTGCCAGGCAAGTGCAt                                            >  1:114368/1‑150 (MQ=255)                                                                                                          ttGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTCCAGGCCACTTGTGCCAGGCAAGTGCATg                                           <  1:548079/150‑1 (MQ=255)                                                                                                              tCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTCCAGGCCACTTGTGCCAGGCAAGTGCATGTCca                                       >  2:91027/1‑150 (MQ=255)                                                                                                                aGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTCCAGGCCACTTGTGCCAGGCAAGTGCATGTCcagc                                     >  2:1144928/1‑150 (MQ=255)                                                                                                                 tcccgatgaccgtccaggccatgcgcgccggggcggtCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTCCAGGCCACTTGTGCCAGGCAAGTGCATGTCcagca                                    >  1:1099964‑M2/38‑150 (MQ=255)                                                                                                                     ttCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTCCAGGCCACTTGTGCCAGGCAAGTGCATGTCcagcagcag                                <  1:135937/150‑1 (MQ=255)                                                                                                                        cACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTCCAGGCCACTTGTGCCAGGCAAGTGCATGTCCAGCAgcaggca                             <  1:68125/150‑1 (MQ=255)                                                                                                                         ACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTCCAGGCCACTTGTGCCAGGCAAGTGCATGTCCAGCAgcaggcag                            <  2:1270246‑M1/150‑1 (MQ=255)                                                                                                                         ACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTCCAGGCCACTTGTGCCAGGCAAGTGCATGTCCAGCAgcaggcag                            <  2:1424923‑M1/150‑1 (MQ=255)                                                                                                                           cgtccaggccatgcgcgccggggcggtCATCGGGATGGTGCCGAAACCAGTCATGaa                                                                                                                       >  2:64686‑M2/28‑57 (MQ=255)                                                                                                                           cgtccaggccatgcgcgccggggcggtCATCGGGATGGTGCCGAAACCAGTCATGaa                                                                                                                       <  1:64686‑M2/30‑1 (MQ=255)                                                                                                                               ccGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTCCAGGCCACTTGTGCCAGGCAAGTGCATGTCCAGCAGCAGGCAGGCACAg                      <  1:179590/150‑1 (MQ=255)                                                                                                                               ccGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTCCAGGCCACTTGTGCCAGGCAAGTGCATGTCCAGCAGCAGGCAGGCACAg                      <  2:1133591/150‑1 (MQ=255)                                                                                                                                 ggCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTCCAGGCCACTTGTGCCAGGCAAGTGCATGTCCAGCAGCAGGCAGGCACAggg                    <  1:720568/150‑1 (MQ=255)                                                                                                                                       cATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTCCAGGCCACTTGTGCCAGGCAAGTGCATGTCCAGCAGCAGGCAGGCACAGGGGGTTTc              <  1:1381906/150‑1 (MQ=255)                                                                                                                                        aTGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTCCAGGCCACtt                                                             >  2:544544/1‑102 (MQ=255)                                                                                                                                        aTGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTCCAGGCCACtt                                                             <  1:544544/102‑1 (MQ=255)                                                                                                                                        aTGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTCCAGGCCACTTGTGCCAGGCAAGTGCATGTCCACCAGCAGGCAGGCACAGGGGGTTTcc             >  2:1278674/1‑150 (MQ=255)                                                                                                                                              tGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTCCAGGCCACTTGTGCCAGGCAAGTGCATGTCCAGCAGCAGGCAGGCACAGGGGGTTTCCAGGCgg       <  1:91027/150‑1 (MQ=255)                                                                                                                                                gACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTCCAGGCCACTTGTGCCAGGCAAGTGCATGTCcagcagca                                 <  2:16067/122‑1 (MQ=255)                                                                                                                                                gACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTCCAGGCCACTTGTGCCAGGCAAGTGCATGTCcagcagca                                 >  1:16067/1‑122 (MQ=255)                                                                                                                                                  cggtCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTCCAGGCCACTTGTGCCAGGCAAGTGCATGTCCAGCAGCAGGCAGGCACAGGGGGTTTCCAGGCGGGCCt   <  2:478191‑M2/146‑1 (MQ=255)                                                                                                                                                   ggtCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTCCAGGCCACTTGTGCCAGGCAAGTGCATGTCCAGCAGCAGGCAGGCACAGGGGGTTTCCAGGCGGGCCTc  <  1:758414‑M2/147‑1 (MQ=255)                                                                                                                                                      cATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTCCAGGCCACTTGTGCCAGGCAAGTGCATGTCcag                                      >  1:676112/1‑111 (MQ=255)                                                                                                                                                      cATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTCCAGGCCACTTGTGCCAGGCAAGTGCATGTCcag                                      <  2:676112/111‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                   TACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGCCCGGGCGCGCACTGTCTGCAACAGGGTCAGCAACTGGTCTTCATCGAACGGCTTGGTCAGAAATTCCACCGCCCCGGCGCGCATGGCCTGGACGGTCATCGGGATGGTGCCGAAACCAGTCATGAACACGATCGGCCAGGGCAGCGCCAGCCGGCACAGCGCATCCTGTACCTCCAGGCCACTTGTGCCAGGCAAGTGCATGTCCAGCAGCAGGCAGGCACAGGGGGTTTCCAGGCGGGCCTC  >  NC_002947/5978394‑5978689

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.