Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
MC JC	NC_002947	1,385,534	Δ69 bp	100%	coding (861‑929/1266 nt)	oprD ←	basic amino acid specific porin OprD

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	1385534	1385602	69	76 [0]	[0] 76	oprD	basic amino acid specific porin OprD

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1385533	0 (0.000)	69 (1.390)	53/232	NT	100%	coding (930/1266 nt)	oprD	basic amino acid specific porin OprD
	?	NC_002947	1385603 =	0 (0.000)					coding (860/1266 nt)	oprD	basic amino acid specific porin OprD

TTCAGGTCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTGGTGTCATAGATGTTGAAGTCGAACACCAGGCCTTGATTGTCG  >  NC_002947/1385459‑1385749                                                                                                                                                 |                                                                                                                                                   acgttggcgtcggaaccgcgtacataacgggtcatgaaggtcaggcctggaatgccgtattcggcgaagttcaggtcgtagcgagcctgccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAg                                                                                                                                               <  1:1103326‑M2/6‑1 (MQ=255)   gttggcgtcggaaccgcgtacataacgggtcatgaaggtcaggcctggaatgccgtattcggcgaagttcaggtcgtagcgagcctgccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGgt                                                                                                                                             >  1:307711‑M2/143‑150 (MQ=255)       gcgtcggaaccgcgtacataacgggtcatgaaggtcaggcctggaatgccgtattcggcgaagttcaggtcgtagcgagcctgccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGa                                                                                                                                         >  2:1325578‑M2/139‑150 (MQ=255)         gtcggaaccgcgtacataacgggtcatgaaggtcaggcctggaatgccgtattcggcgaagttcaggtcgtagcgagcctgccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAgc                                                                                                                                       >  2:68361‑M2/137‑150 (MQ=255)             gaaccgcgtacataacgggtcatgaaggtcaggcctggaatgccgtattcggcgaagttcaggtcgtagcgagcctgccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCg                                                                                                                                   >  1:273391‑M2/133‑150 (MQ=255)                ccgcgtacataacgggtcatgaaggtcaggcctggaatgccgtattcggcgaagttcaggtcgtagcgagcctgccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGAtg                                                                                                                                >  1:1346137‑M2/130‑150 (MQ=255)                 cgcgtacataacgggtcatgaaggtcaggcctggaatgccgtattcggcgaagttcaggtcgtagcgagcctgccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGaa                                                                                                                                                <  2:800529‑M2/5‑1 (MQ=255)                 cgcgtacataacgggtcatgaaggtcaggcctggaatgccgtattcggcgaagttcaggtcgtagcgagcctgccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGaa                                                                                                                                                >  1:800529‑M2/129‑133 (MQ=255)                  gcgtacataccgggtcatgaaggtcaggcctggaatgccgtattcggcgaagttcaggtcgtagcgagcctgccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGAtgtt                                                                                                                              <  1:935971‑M2/23‑1 (MQ=255)                  gcgtacataacgggtcatgaaggtcaggcctggaatgccgtattcggcgaagttcaggtcgtagcgagcctgccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGAtgtt                                                                                                                              <  2:924230‑M2/23‑1 (MQ=255)                  gcgtacataacgggtcatgaaggtcaggcctggaatgccgtattcggcgaagttcaggtcgtagcgagcctgccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGAtgtt                                                                                                                              >  2:1236342‑M2/128‑150 (MQ=255)                      acataacgggtcatgaaggtcaggcctggaatgccgtattcggcgaagttcaggtcgtagcgagcctgccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAg                                                                                                                          >  1:1002665‑M2/124‑150 (MQ=255)                      acataacgggtcatgaaggtcaggcctggaatgccgtattcggcgaagttcaggtcgtagcgagcctgccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAg                                                                                                                          >  2:941084‑M2/124‑150 (MQ=255)                       cataacgggtcatgaaggtcaggcctggaatgccgtattcggcgaagttcaggtcgtagcgagcctgccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAgg                                                                                                                         <  2:1144254‑M2/28‑1 (MQ=255)                       cataacgggtcatgaaggtcaggcctggaatgccgtattcggcgaagttcaggtcgtagcgagcctgccaggatttctcgtcgtcggcgttgaagtcggtgcgggccatggagttggccaggGGGAAGGTGTGAGCGCCGATGTTGTAgg                                                                                                                         >  1:1288332‑M2/123‑150 (MQ=255)                        ataacgggtcatgaaggtcaggcctggaatgccgtattcggcgaagttcaggtcgtagcgagcctgccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGgc                                                                                                                        >  2:521189‑M2/122‑150 (MQ=255)                          aacgggtcatgaaggtcaggcctggaatgccgtattcggcgaagttcaggtcgtagcgagcctgccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGgcgc                                                                                                                      >  1:242912‑M2/120‑150 (MQ=255)                                tcatgaaggtcaggcctggaatgccgtattcggcgaagttcaggtcgtagcgagcctgccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACa                                                                                                                <  1:521189‑M2/37‑1 (MQ=255)                                  atgaaggtcaggcctggaatgccgtattcggcgaagttcaggtcgtagcgagcctgccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAgg                                                                                                              >  1:592564‑M2/112‑150 (MQ=255)                                  atgaaggtcaggcctggaatgccgtattcggcgaagttcaggtcgtagcgagcctgccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAgg                                                                                                              >  2:267563‑M2/112‑150 (MQ=255)                                   tgaaggtcaggcctggaattccgtattcggcgaagttcaggtcgtagcgagcctgccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGc                                                                                                             <  1:83599‑M2/40‑1 (MQ=255)                                   tgaaggtcaggcctggaatgccgtattcggcgaagttcaggtcgtagcgagcctgccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGc                                                                                                             <  2:1205157‑M2/40‑1 (MQ=255)                                        gtcaggcctggaatgccgtattcggcgaagttcaggtcgtagcgagcctgccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCtgatc                                                                                                        <  1:765268‑M2/45‑3 (MQ=255)                                        gtcaggcctggaatgccgtattcggcgaagttcaggtcgtagcgagcctgccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAAc                                                                                                        <  1:71080‑M2/45‑1 (MQ=255)                                           aggcctggaatgccgtattcggcgaagttaaggtcgtagcgagcctgccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAAcgcg                                                                                                     >  1:1335615‑M2/103‑150 (MQ=255)                                             gcctggaatgccgtattcggcgaagttcaggtcgtagcgagcctgccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAAcgcgcg                                                                                                   <  2:85211‑M2/50‑1 (MQ=255)                                             gcctggaatgccgtattcggcgaagttcaggtcgtagcgagcctgccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAAcgcgcg                                                                                                   <  1:1325578‑M2/50‑1 (MQ=255)                                              cctggaatgccgtattcggcgaagttcaggtcgtagcgagcctgccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCgg                                                                                                  <  2:1351892‑M2/51‑1 (MQ=255)                                               ctggaatgccgtattcggcgaagttcaggtcgtagcgagcctgccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGAtg                                                                                                                                <  1:605791‑M2/21‑1 (MQ=255)                                               ctggaatgccgtattcggcgaagttcaggtcgtagcgagcctgccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGAtg                                                                                                                                >  2:605791‑M2/99‑119 (MQ=255)                                               ctggaatgccgtattcggcgaagttcaggtcgtagcgagcctgccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGt                                                                                                 >  2:511983‑M2/99‑150 (MQ=255)                                                   aatgccgtattcggcgaagttcaggtcgtagcgagcctgccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTc                                                                                             <  2:251656‑M2/56‑1 (MQ=255)                                                        cgtattcggcgaagttcaggtcgtagcgagcctgccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCt                                                                                        >  1:1049932‑M2/90‑150 (MQ=255)                                                                gcgaagttcaggtcgtagcgagcctgccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCa                                                                                >  1:882347‑M2/82‑150 (MQ=255)                                                                      ttcaggtcgtagcgagcctgccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAg                                                                          <  2:242912‑M2/75‑1 (MQ=255)                                                                            tcgtagcgagcctgccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGACCGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCgg                                                                    <  1:474122‑M2/81‑1 (MQ=255)                                                                               tagcgagcctgccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTAc                                                                 >  1:1012734‑M2/67‑150 (MQ=255)                                                                                     gcctgccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCa                                                           <  1:68361‑M2/90‑1 (MQ=255)                                                                                         gcgaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGc                                                       >  1:1423046‑M2/57‑150 (MQ=255)                                                                                         gccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGc                                                       <  2:1012734‑M2/94‑1 (MQ=255)                                                                                          ccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCaga                                                         >  2:976488‑M2/56‑147 (MQ=255)                                                                                          ccaggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCaga                                                         <  1:976488‑M2/92‑1 (MQ=255)                                                                                           caggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCt                                                     >  2:568622‑M2/55‑150 (MQ=255)                                                                                            aggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCtt                                                    <  2:1078734‑M2/97‑1 (MQ=255)                                                                                            aggatttctcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCtt                                                    >  1:894959‑M2/54‑150 (MQ=255)                                                                                              gattcatcgccttaggcgttgaagacggagcgtgccacggagtttgctaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCg                                                  <  2:307711‑M2/99‑1 (MQ=255)                                                                                                  tcgcctcttcggcgttgatttcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGctct                                              >  2:1307490‑M2/48‑150 (MQ=255)                                                                                                    tcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTg                                            <  1:511983‑M2/105‑1 (MQ=255)                                                                                                    tcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTg                                            <  2:882347‑M2/105‑1 (MQ=255)                                                                                                    tcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTg                                            <  2:1049932‑M2/105‑1 (MQ=255)                                                                                                    tcgtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTg                                            <  2:273391‑M2/105‑1 (MQ=255)                                                                                                      gtcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTGgt                                          <  1:941084‑M2/107‑1 (MQ=255)                                                                                                       tcttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTGgtg                                         >  1:892591‑M2/43‑150 (MQ=255)                                                                                                         ttcggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTGGTGTc                                       >  2:759008‑M2/41‑150 (MQ=255)                                                                                                            ggcgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTGCTCGGCAGAGCCTTCGCTCTTGGTGTCATa                                    <  2:1335615‑M2/113‑1 (MQ=255)                                                                                                              cgttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTGGTGTCATAGa                                  <  2:1002665‑M2/115‑1 (MQ=255)                                                                                                                ttgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTGGTGTCATAGATg                                >  1:983409‑M2/34‑150 (MQ=255)                                                                                                                 tgaagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTGGTGTCATAGATGt                               <  2:983409‑M2/118‑1 (MQ=255)                                                                                                                   aagtcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTGGTGTCATAGATGTTg                             <  2:892591‑M2/120‑1 (MQ=255)                                                                                                                      tcggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTGGTGTCATAGATGTTGAAg                          <  1:568622‑M2/123‑1 (MQ=255)                                                                                                                        ggagcgggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTGGTGTCATAGATGTTGAAGTc                        >  2:185256‑M2/26‑150 (MQ=255)                                                                                                                             gggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTGGTGTCATAGATGTTGAAGTCGAaca                   >  1:1063505‑M2/21‑150 (MQ=255)                                                                                                                              ggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCgg                                                             >  1:796478‑M2/20‑107 (MQ=255)                                                                                                                              ggccacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCgg                                                             <  2:796478‑M2/88‑1 (MQ=255)                                                                                                                                 cacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTGGTGTCATAGATGTTGAAGTCGAACACCAg               >  1:954209‑M2/17‑150 (MQ=255)                                                                                                                                 cacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTGGTGTCATAGATGTTGAAGTCGAACACCAg               >  1:633465‑M2/17‑150 (MQ=255)                                                                                                                                 cacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTGGTGTCATAGATGTTGAAGTCGAACACCAg               >  1:382350‑M2/17‑150 (MQ=255)                                                                                                                                 cacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTGGTGTCATAGATGTTGAAGTCGAACACCAg               >  2:885043‑M2/17‑150 (MQ=255)                                                                                                                                 cacggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTGGTGTCATAGATGTTGAAGTCGAACACCAg               >  1:1312738‑M2/17‑150 (MQ=255)                                                                                                                                  acggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTGGTGTCATAGATGTTGAAGTCGAACACCAgg              >  1:641880‑M2/16‑150 (MQ=255)                                                                                                                                    ggagttggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAGCGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTGGTGTCATAGATGTTGAAGTCGAACACCAGGcc            >  1:1417394‑M2/14‑150 (MQ=255)                                                                                                                                          ggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTGGTGTCATAGATGTTGAAGTCGAACACCAGGCCTTGAtt      >  2:706569‑M2/8‑150 (MQ=255)                                                                                                                                          ggccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTGGTGTCATAGATGTTGAAGTCGAACACCAGGCCTTGAtt      <  2:848950‑M2/143‑1 (MQ=255)                                                                                                                                           gccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTGGTGTCATAGATGTTGAAGTCGAACACCAGGCCTTGATTg     >  2:1193186‑M2/7‑150 (MQ=255)                                                                                                                                            ccaggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTGGTGTCATAGATGTTGAAGTCGAACACCAGGCCTTGATTGt    <  1:267563‑M2/145‑1 (MQ=255)                                                                                                                                              aggGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTGGTGTCATAGATGTTGAAGTCGAACACCAGGCCTTGATTGTCg  <  2:1346137‑M2/147‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                   TTCAGGTCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTGGTGTCATAGATGTTGAAGTCGAACACCAGGCCTTGATTGTCG  >  NC_002947/1385459‑1385749

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑