BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_002947	3,866,735	Δ8 bp	coding (180‑187/1020 nt)	PP_3415 ←	LacI family transcriptional regulator

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	3866735	3866742	8	436 [0]	[0] 435	PP_3415	LacI family transcriptional regulator

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3866734	0 (0.000)	434 (1.200)	159/290	0.1	100%	coding (188/1020 nt)	PP_3415	LacI family transcriptional regulator
*	?	NC_002947	3866743 =	0 (0.000)	434 (1.200)	159/290	0.1	100%	coding (179/1020 nt)	PP_3415	LacI family transcriptional regulator

Only 100 of 435 total aligned reads displayed.

GTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGGTGTCGATGAACAGTTGGTTGGACAACGACGGGATCAACACCACCACCGACTGGCTGCGTGCCGAGGCCAGCGCCCGGGCGGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGGCGCGCGAAGCGGTAATCGGGGAAACCCCGGAAAGCCTGGCAACTTCGGCCAGGGTGGGA  >  NC_002947/3866595‑3866889

gcaaggtcgtaatgatagttgccgatcagcacctctagcccacgagggcgcatgacctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGc                                                                                                                                                   >  1:4012013‑M2/149‑150 (MQ=255)

 caaggtcgtaatgatagttgccgatcagcacctctagcccacgagggcgcatgacctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGcc                                                                                                                                                  <  2:2279890‑M2/3‑1 (MQ=255)

 caaggtcgtaatgatagttgccgatcagcacctctagcccacgagggcgcatgacctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGcc                                                                                                                                                  <  2:6802987‑M2/3‑1 (MQ=255)

   aggtcgtaatgatagttgccgatcagcacctctagcccacgagggcgcatgacctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCgg                                                                                                                                                <  1:3462918‑M2/5‑1 (MQ=255)

    ggtcgtaatgatagttgccgatcagcacctctagcccacgagggcgcatgacctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCggg                                                                                                                                               <  1:3640722‑M2/6‑1 (MQ=255)

      tcgtaatgatagttgccgatcagcacctctagcccacgagggcgcatgacctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGtt                                                                                                                                             >  2:3179082‑M2/143‑150 (MQ=255)

        gtaatgatagttgccgatcagcacctctagcccacgagggcgcatgacctcgtgaatggcctcccgggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTgg                                                                                                                                           <  1:6979959‑M2/10‑1 (MQ=255)

        gtaatgatagttgccgatcagcacctctagcccacgagggcgcatgacctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTgg                                                                                                                                           >  2:5889564‑M2/141‑150 (MQ=255)

         taatgatagttgccgatcagcacctctagcccacgagggcgcatgacctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGc                                                                                                                                          <  1:2558376‑M2/11‑1 (MQ=255)

           atgatagttgccgatcagcacctctagcccacgagggcgcatgacctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCca                                                                                                                                        >  2:4796697‑M2/138‑150 (MQ=255)

            tgatagttgccgatcagcacctctagcccacgagggcgcatgacctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCcac                                                                                                                                       >  1:3290850‑M2/137‑150 (MQ=255)

             gatagttgccgatcagcacctctagcccacgagggcgcatgacctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCcaca                                                                                                                                      >  1:884139‑M2/136‑150 (MQ=255)

                  ttgccgatcagcacctctagcccacgagggcgcatgacctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGcc                                                                                                                                 >  2:3520022‑M2/131‑150 (MQ=255)

                   tgccgatcaacacctctagcccacgagggcgcatgacctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCa                                                                                                                                <  1:2649616‑M2/21‑1 (MQ=255)

                    gccgatcagcacctctagcccacgagggcgcatgacctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCaa                                                                                                                               <  2:2523452‑M2/22‑1 (MQ=255)

                    gccgatcagcacctctagcccacgagggcgcatgacctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCaa                                                                                                                               <  1:975396‑M2/22‑1 (MQ=255)

                      cgatcagcacctctagcccacgagggcgcatgacctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAgg                                                                                                                             >  1:279549‑M2/127‑150 (MQ=255)

                      cgatcagcacctctagcccacgagggcgcatgacctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAgg                                                                                                                             >  1:477269‑M2/127‑150 (MQ=255)

                           agcacctctagcccacgagggcgcatgacctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTcgc                                                                                                                        <  2:7008832‑M2/29‑1 (MQ=255)

                           agcacctctagcccacgagggcgcatgacctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTcgc                                                                                                                        <  2:6261473‑M2/29‑1 (MQ=255)

                            gcacctctagcccacgagggcgcatgacctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTcgcc                                                                                                                       >  1:2352584‑M2/121‑150 (MQ=255)

                                    agcccacgagggcgcatgacctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTgcggc                                                                                                               <  2:4450852‑M2/38‑1 (MQ=255)

                                      cccacgagggcgcatgacctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGa                                                                                                             >  2:4079080‑M2/111‑150 (MQ=255)

                                       ccacgagggcgcatgacctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGAt                                                                                                            <  2:2791505‑M2/41‑1 (MQ=255)

                                       ccacgagggcgcatgacctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGAt                                                                                                            >  2:1430134‑M2/110‑150 (MQ=255)

                                       ccacgagggcgcatgacctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGAt                                                                                                            <  2:7925868‑M2/41‑1 (MQ=255)

                                       ccacgagggcgcatgacctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGAt                                                                                                            <  2:7634965‑M2/41‑1 (MQ=255)

                                        cacgagggcgcatgacctcgtgaatggcctccagggtgtcgatgaccagttggttggacaacgacgggatcaacaccacccccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATg                                                                                                           >  1:6393035‑M2/109‑150 (MQ=255)

                                        cacgagggcgcatgacctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATg                                                                                                           >  2:7736204‑M2/109‑150 (MQ=255)

                                        cacgagggcgcatgacctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATg                                                                                                           >  1:7360463‑M2/109‑150 (MQ=255)

                                        cacgagggcgcatgacctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATg                                                                                                           >  1:1398176‑M2/109‑150 (MQ=255)

                                        cacgagggcgcatgacctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATg                                                                                                           >  1:6034456‑M2/109‑150 (MQ=255)

                                         acgagggcgcatgacctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGa                                                                                                          >  2:3684901‑M2/108‑150 (MQ=255)

                                          cgagggcgcatgacctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGAc                                                                                                         <  1:7752144‑M2/44‑1 (MQ=255)

                                          cgagggcgcatgacctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGAc                                                                                                         <  2:3362871‑M2/44‑1 (MQ=255)

                                           gagggcgcatgacctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGAcc                                                                                                        <  2:6434811‑M2/45‑1 (MQ=255)

                                                  catgacctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTcca                                                                                                 <  2:1781646‑M2/52‑1 (MQ=255)

                                                    tgacctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTccacc                                                                                               >  2:4626683‑M2/97‑150 (MQ=255)

                                                     gacctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTccacca                                                                                              <  1:177578‑M2/55‑1 (MQ=255)

                                                        ctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGt                                                                                           <  1:287682‑M2/58‑1 (MQ=255)

                                                        ctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGt                                                                                           >  2:6887671‑M2/93‑150 (MQ=255)

                                                        ctcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGt                                                                                           >  1:1854765‑M2/93‑150 (MQ=255)

                                                         tcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTc                                                                                          >  2:2376035‑M2/92‑150 (MQ=255)

                                                         tcgtgaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTc                                                                                          >  1:523606‑M2/92‑150 (MQ=255)

                                                           gtgaatggcctccagggtgtcgatgaacagttggttggacagcgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAg                                                                                        >  2:116446‑M2/90‑150 (MQ=255)

                                                             gaatggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGgc                                                                                      >  2:569320‑M2/88‑150 (MQ=255)

                                                                tggcctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCa                                                                                   >  1:4091108‑M2/85‑150 (MQ=255)

                                                                   cctccagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACg                                                                                >  1:1118794‑M2/82‑150 (MQ=255)

                                                                    ctccggggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACgg                                                                               >  1:7104605‑M2/81‑150 (MQ=255)

                                                                       cagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGc                                                                            <  2:6693463‑M2/73‑1 (MQ=255)

                                                                       cagggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGc                                                                            >  1:6749481‑M2/78‑150 (MQ=255)

                                                                        agggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCt                                                                           <  2:7870126‑M2/74‑1 (MQ=255)

                                                                          ggtgtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGa                                                                         >  2:3968906‑M2/75‑150 (MQ=255)

                                                                             gtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGAccc                                                                      <  2:4975114‑M2/79‑1 (MQ=255)

                                                                             gtcgatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGAccc                                                                      <  2:2958054‑M2/79‑1 (MQ=255)

                                                                                gatgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCAc                                                                   >  1:4489856‑M2/69‑150 (MQ=255)

                                                                                  tgaacagttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGc                                                                 >  1:308009‑M2/67‑150 (MQ=255)

                                                                                       agttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCa                                                                                         <  2:7339535‑M2/60‑1 (MQ=255)

                                                                                       agttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGgc                                                            <  1:426763‑M2/89‑1 (MQ=255)

                                                                                       agttggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGgc                                                            <  2:5562193‑M2/89‑1 (MQ=255)

                                                                                           ggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggcctgcgTCCGGGTTGGCCACATTGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGAAAAGGTGCTGACCCCACGCAAGgcgcgc                                                        <  1:596786‑M2/93‑1 (MQ=255)

                                                                                           ggttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGgcgcgc                                                        >  1:782549‑M2/58‑150 (MQ=255)

                                                                                             ttggacaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGGCGCGCGa                                                      >  2:656303‑M2/56‑150 (MQ=255)

                                                                                                 acaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGGCGCGCGAAGCg                                                  >  1:5071571‑M2/52‑150 (MQ=255)

                                                                                                 acaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGGCGCGCGAAGCg                                                  >  1:6622013‑M2/52‑150 (MQ=255)

                                                                                                 acaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGGCGCGCGAAGCg                                                  <  1:1034424‑M2/99‑1 (MQ=255)

                                                                                                 acaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGGCGCGCGAAGCg                                                  <  1:2153336‑M2/99‑1 (MQ=255)

                                                                                                 acaacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGGCGCGCGAAGCg                                                  <  1:3371790‑M2/99‑1 (MQ=255)

                                                                                                  caacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGGCGCGCGAAGCgg                                                 <  1:628815‑M2/100‑1 (MQ=255)

                                                                                                  caacgacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGGCGCGCGAAGCgg                                                 <  2:52407‑M2/100‑1 (MQ=255)

                                                                                                      gacgggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGGCGCGCGAAGCGGTAAt                                             >  1:1596685‑M2/47‑150 (MQ=255)

                                                                                                          ggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGGCGCGCGAAGCGGTAATCggg                                         >  1:1982962‑M2/43‑150 (MQ=255)

                                                                                                          ggatcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGGCGCGCGAAGCGGTAATCggg                                         <  2:1881099‑M2/108‑1 (MQ=255)

                                                                                                            atcaacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGGCGCGCGAAGCGGTAATCGGGGa                                       <  1:605686‑M2/110‑1 (MQ=255)

                                                                                                               aacaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGGCGCGCGAAGCGGTAATCGGGGAAAc                                    >  2:1056588‑M2/38‑150 (MQ=255)

                                                                                                                acaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGGCGCGCGAAGCGGTAATCGGGGAAAcc                                   >  2:6154447‑M2/37‑150 (MQ=255)

                                                                                                                acaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGGCGCGCGAAGCGGTAATCGGGGAAAcc                                   >  1:7298375‑M2/37‑150 (MQ=255)

                                                                                                                acaccaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGGCGCGCGAAGCGGTAATCGGGGAAAcc                                   >  2:4846560‑M2/37‑150 (MQ=255)

                                                                                                                  accaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGGCGCGCGAAGCGGTAATCGGGGAAAcccc                                 >  1:2999291‑M2/35‑150 (MQ=255)

                                                                                                                  accaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGGCGCGCGAAGCGGTAATCGGGGAAAcccc                                 >  2:4192824‑M2/35‑150 (MQ=255)

                                                                                                                  accaccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGGCGCGCGAAGCGGTAATCGGGGAAAcccc                                 <  1:5889306‑M2/116‑1 (MQ=255)

                                                                                                                    caccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGGCGCGCGAAGCGGTAATCGGGGAAACCCCgg                               >  1:5438018‑M2/33‑150 (MQ=255)

                                                                                                                    caccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTAGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGGCGCGCGAAGCGGTAATCGGGGAAACCCCgg                               >  2:608084‑M2/33‑150 (MQ=255)

                                                                                                                     accaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGGCGCGCGAAGCGGTAATCGGGGAAACCCCGGa                              >  1:3693301‑M2/32‑150 (MQ=255)

                                                                                                                      ccaccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGGCGCGCGAAGCGGTAATCGGGGAAACCCCGGaa                             <  2:2051336‑M2/120‑1 (MQ=255)

                                                                                                                        gccgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGGCGCGCGAAGCGGTAATCGGGGAAACCCCGGAAAg                           >  2:1506647‑M2/29‑150 (MQ=255)

                                                                                                                        accgactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGGCGCGCGAAGCGGTAATCGGGGAAACCCCGGAAAg                           >  2:545219‑M2/29‑150 (MQ=255)

                                                                                                                           gactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGGCGCGCGAAGCGGTCATCGGGGAAACCCCGGAAAGCCt                        >  2:7259447‑M2/26‑150 (MQ=255)

                                                                                                                           gactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGGCGCGCGAAGCGGTAATCGGGGAAACCCCGGAAAGCCt                        <  2:7968191‑M2/125‑1 (MQ=255)

                                                                                                                           gactggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGGCGCGCGAAGCGGTAATCGGGGAAACCCCGGAAAGCCt                        <  1:5646063‑M2/125‑1 (MQ=255)

                                                                                                                            actggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGGCGCGCGAAGCGGTAATCGGGGAAACCCCGGAAAGCCTg                       <  2:5988722‑M2/126‑1 (MQ=255)

                                                                                                                            actggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGGCGCGCGAAGCGGTAATCGGGGAAACCCCGGAAAGCCTg                       <  1:3887359‑M2/126‑1 (MQ=255)

                                                                                                                            actggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGGCGCGCGAAGCGGTAATCGGGGAAACCCCGGAAAGCCTg                       <  1:4417215‑M2/126‑1 (MQ=255)

                                                                                                                            actggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGGCGCGCGAAGCGGTAATCGGGGAAACCCCGGAAAGCCTg                       <  1:7530981‑M2/126‑1 (MQ=255)

                                                                                                                              tggctgcgtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGGCGCGCGAAGCGGTAATCGGGGAAACCCCGGAAAGCCTGGc                     >  2:4266246‑M2/23‑150 (MQ=255)

                                                                                                                                     gtgccgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGGCGCGCGAAGCGGTAATCGGGGAAACCCCGGAAAGCCTGGCAACTTCg              <  2:2818251‑M2/135‑1 (MQ=255)

                                                                                                                                         cgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGGCGCGCGAAGCGGTAATCGGGGAAACCCCGGAACGCCTGGCAACTTCGgccc          >  1:5320136‑M2/12‑149 (MQ=255)

                                                                                                                                         cgaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGGCGCGCGAAGCGGTAATCGGGGAAACCCCGGAAAGCCTGGCAACTTCGGCCa          >  2:3767995‑M2/12‑150 (MQ=255)

                                                                                                                                          gaggccagcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGGCGCGCGACGCGGTAATCGGGGAAACCCCGGAAAGCCTGGCACCTTCGGCCAg         >  1:5722144‑M2/11‑150 (MQ=255)

                                                                                                                                                agcgGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCAGACCCCACGCAAGGCGCGCGAAGCGGTAATCGGGGAAACCCCGGAAAGCCTGGCAACTTCGGCCAGGGTggg   >  1:4607688‑M2/5‑150 (MQ=255)

GTAATGATAGTTGCCGATCAGCACCTCTAGCCCACGAGGGCGCATGACCTCGTGAATGGCCTCCAGGGTGTCGATGAACAGTTGGTTGGACAACGACGGGATCAACACCACCACCGACTGGCTGCGTGCCGAGGCCAGCGCCCGGGCGGCCGGGTTGGCCACATAGCCAAGGTTCGCCGCTGCGGCGATGACCTTTTCCACCAGGTCAGGCGCAACGGTGCTGACCCCACGCAAGGCGCGCGAAGCGGTAATCGGGGAAACCCCGGAAAGCCTGGCAACTTCGGCCAGGGTGGGA  >  NC_002947/3866595‑3866889

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`