New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 601389130 (0.540)22 (0.500) 17/202 2.0 43.3% intergenic (+40/+70) xpt/PP_5266 xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
?NC_002947 = 6013919 34 (0.770)intergenic (+68/+42) xpt/PP_5266 xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein

GCGGGCCTGGGTATCGTGATCGAGAAGTCGTTCCAGGGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6013720‑6013891
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcacgcccgctcccacaggtACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACCCGGGCCAGCGATTCAACGCGGTAACCCTGGCTGTC  <  NC_002947/6013919‑6013774
                                                                                                                                                                                                                                                                                                                                
GCGGGCCTGGGTATCGTGATCGAGAAGTCGTTCCAGGGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGC                                                                                                                                                                            <  1:109405/150‑1
GCGGGCCTGGGTATCGTGATCGAGAAGTCGTTCCAGGGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGC                                                                                                                                                                            >  2:109405/1‑150
 CGGGCCTGGGTATCGTGATCGAGAAGTCGTTCCAGGGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCG                                                                                                                                                                           <  2:600321/150‑1
 CGGGCCTGGGTATCGTGATCGAGAAGTCGTTCCAGGGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCG                                                                                                                                                                           >  1:39748/1‑150
  GGGCCTGGGTATCGTTATCGAGAAGTCGTTCCAGGGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGG                                                                                                                                                                          <  2:1022468/150‑1
  GGGCCTGGGTATCGTGATCGAGAAGTCGTTCCAGGGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGG                                                                                                                                                                          <  2:218127/150‑1
        GGGTATCGTGATCGAGAAGTCGTTCCAGGGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGC                                                                                                                                                                    <  2:605901/150‑1
            ATCGTGATCGAGAAGTCGTTCCAGGGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGG                                                                                                                                                                          >  2:1324479/1‑140
            ATCGTGATCGAGAAGTCGTTCCAGGGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGG                                                                                                                                                                          <  1:1324479/140‑1
               GTGATCGAGAAGTCGTTCCAGGGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCC                                                                                                                                                             <  2:319114/150‑1
                 GATCGAGAAGTCGTTCCAGGGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCA                                                                                                                                                           <  1:194052/150‑1
                             gcTCCAGGGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCAC                                                                                                                                               >  2:886527/3‑150
                                   GGGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCCCAGGTACGGCACAGCGTT                                                                                                                                        >  2:229347/1‑150
                                           GTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGCGTTCGAGACCT                                                                                                                               <  2:640879/150‑1
                                                    TGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCAC                                                                                                                      <  1:1236971/150‑1
                                                        CAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGT                                                                                                                  <  1:886527/150‑1
                                                        CAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGT                                                                                                                  <  1:367553/150‑1
                                                                     CGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGT                                                                                                                                                      >  1:339614/1‑103
                                                                     CGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGT                                                                                                                                                      <  2:339614/103‑1
                                                                                 CTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCA                                                                                                                                                           >  2:900310/1‑86
                                                                                 CTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCA                                                                                                                                                           <  1:900310/86‑1
                                                                                        GGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAG                                                                                                                                                        >  1:1473049/1‑82
                                                                                        GGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAG                                                                                                                                                        <  2:1473049/82‑1
                                                                                         GGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCT                                                                                                                    <  2:1059937/115‑1
                                                                                         GGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCT                                                                                                                    >  1:1059937/1‑115
                                                                                                                   TCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGG                                                                                                                >  2:929111/1‑93
                                                                                                                   TCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGG                                                                                                                <  1:929111/93‑1
                                                                                                                        TTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGT                                                                                                                  >  1:1192821/1‑86
                                                                                                                        TTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGT                                                                                                                  <  2:1192821/86‑1
                                                                                                                        TTCATCGAATAAACGCGACACCTGCTTCGCGAGCACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGT                                                                                                                  >  1:251131/1‑86
                                                                                                                        TTCATCGAATAAACGCGACACCTGCTTCGCGAGCACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGT                                                                                                                  <  2:251131/86‑1
                                                                                                                            TCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTG                                                                                                                 >  1:268811/1‑83
                                                                                                                            TCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTG                                                                                                                 <  2:268811/83‑1
                                                                                                                              GAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCGGCACAGCGTTCGAGACCTGTGC                                                                                                                           >  1:809769/1‑71
                                                                                                                              GAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCGGCACAGCGTTCGAGACCTGTGC                                                                                                                           <  2:809769/71‑1
                                                                                                                              GAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGA                                                                                                              <  1:173142/84‑1
                                                                                                                              GAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGA                                                                                                              >  2:173142/1‑84
                                                                                                                                         ACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGC                                                                                                                        <  1:1430690/63‑1
                                                                                                                                         ACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGC                                                                                                                        >  2:1430690/1‑63
                                                                                                                                                         CACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACCCGGGCCAGCGATTCAACGCG                 <  1:343020/150‑1
                                                                                                                                                         CACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACCCGGGCCAGCGATTCAACGCG                 >  2:516677/1‑150
                                                                                                                                                          ACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGG                                                                                                                >  2:744791/1‑54
                                                                                                                                                          ACGCCCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGG                                                                                                                <  1:744791/54‑1
                                                                                                                                                            GCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACCCGGGCCAGCGATTCAACGCGGTA              >  1:229347/1‑150
                                                                                                                                                              CCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACCCGGGCCAGCGATTCAACGCGGTAAC            >  1:674673/1‑150
                                                                                                                                                              CCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACCCGGGCCAGCGA                          >  1:1152389/1‑136
                                                                                                                                                              CCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACCCGGGCCAGCGA                          <  2:1152389/136‑1
                                                                                                                                                              CCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGA                                                               >  2:303414/1‑99
                                                                                                                                                              CCGCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGA                                                               <  1:303414/99‑1
                                                                                                                                                                GCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACCCGGGC                                <  1:79626/128‑1
                                                                                                                                                                GCTCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACCCGGGC                                >  2:79626/1‑128
                                                                                                                                                                  TCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACCCGGGCCAGCGATTCAACGCGGTAACCCTG        >  1:673159/1‑150
                                                                                                                                                                    CCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACCCGGGCCAGCGATTCAACGCGGTAACCCTGGC      >  2:39748/1‑150
                                                                                                                                                                    CCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACCCGGGCCAGCGATTCAACGCGGTAACCCTGGC      >  2:1229588/1‑150
                                                                                                                                                                    CCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACAC                                                         >  2:321187/1‑99
                                                                                                                                                                    CCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACAC                                                         <  1:321187/99‑1
                                                                                                                                                                    CCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTC                                                                                    <  2:737925/72‑1
                                                                                                                                                                    CCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTC                                                                                    >  1:737925/1‑72
                                                                                                                                                                      ACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACCCGGGCCAGCGATTCAA                     >  2:1425697/1‑133
                                                                                                                                                                      ACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACCCGGGCCAGCGATTCAA                     <  1:1425697/133‑1
                                                                                                                                                                        AGGTACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCATCGTGGTCACCCTGGCCAGCGATTCAACGCGGTAACCCTGGCTGTC  <  1:993487/150‑1
                                                                                                                                                                                                                                                                                                                                
GCGGGCCTGGGTATCGTGATCGAGAAGTCGTTCCAGGGCGGCCGTGCCGAACTGGACAGCCAGGGTTACCGCGTTGAATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6013720‑6013891
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcacgcccgctcccacaggtACGGCACAGCGTTCGAGACCTGTGCTGCACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGGTGTCGCGTTTATTCGATGAAGCTGACCACACCACCTTCCAGCGACTTCACCCGGGCCAGCGATTCAACGCGGTAACCCTGGCTGTC  <  NC_002947/6013919‑6013774

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.