New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 20374518 (0.570)15 (0.490) 6/238 NT 46.5% coding (9251/26049 nt) PP_0168 putative surface adhesion protein
?NC_002947 = 207772 NA (NA)coding (13278/26049 nt) PP_0168 putative surface adhesion protein

CGTGGCCAAGTTGACCGCCACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/203596‑203745
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgccATTAGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAATGCACTGTGGTTGTTGATCGGCAGGCCGTCTTTGTTGGTCAGGGTGATGGTGTAAGTGATCTCGCCACCTTCGGTGACCGAAGGGGTCGCGGTCAGC  <  NC_002947/207772‑207625
                                                                                                                                                                                                                                                                                                          
CGTGGCCAAGTTGACCGCCACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCC                                                                                                                                                      <  1:508198/150‑1
              CCGCCACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGTTGGCCGGCACGG                                                                                                                                        <  1:706604/150‑1
                GCCACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCAAGTCCCCGAACAAAGATGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGTTGGCCGGCACGGTG                                                                                                                                      <  1:692356/150‑1
                  gACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACGCTGACCAACAAAGACGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGTTGGCCGGCACGGTGAT                                                                                                                                    <  1:695566/149‑1
                                  GAAGGCGGCGAGATCACCTACACCATCACCCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAGACCGTCATCACCGTGCCGTTGGCCGGCACGGTGATGACGGTCTTGCC                                                                                                                        >  1:182555/1‑146
                                  GAAGGCGGCGAGATCACCTACACCATCACCCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAGACCGTCATCACCGTGCCGTTGGCCGGCACGGTGATGACGGTCTTGCC                                                                                                                        <  2:182555/146‑1
                                                         CATCACCCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGTGACGGCAAAACCGTCATCACGGTGCCGTTGGCCGGCACGGTGATGACGG                                                                                                                               <  1:118977/116‑1
                                                         CATCACCCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGTGACGGCAAAACCGTCATCACGGTGCCGTTGGCCGGCACGGTGATGACGG                                                                                                                               >  2:118977/1‑116
                                                                     CAACAAAGACGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACGGTGCCGTTGGCCGGCACGGTGA                                                                                                                                     <  1:287849/98‑1
                                                                     CAACAAAGACGGTCTGCCAATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACGGTGCCGTTGGCCGGCACGGTGA                                                                                                                                     >  2:287849/1‑98
                                                                      AACAAAGATGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACCCTGAGCGACGGCAAAACCGTCATCACCGTGCCATTAGCCGGCACGGTGA                                                                                                                                     <  2:748831/97‑1
                                                                      AACAAAGATGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACCCTGAGCGACGGCAAAACCGTCATCACCGTGCCATTAGCCGGCACGGTGA                                                                                                                                     >  1:748831/1‑97
                                                                                       GATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCATTAGCCGGCACGGTGA                                                                                                                                     <  1:300233/80‑1
                                                                                       GATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCATTAGCCGGCACGGTGA                                                                                                                                     >  2:300233/1‑80
                                                                                           AACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCATTAGCCGGCACGGTGATGA                                                                                                                                  <  1:724790/79‑1
                                                                                           AACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCATTAGCCGGCACGGTGATGA                                                                                                                                  >  2:724790/1‑79
                                                                                                                                                  TGCCATTAGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAATGCACTGTGGTTGTTGATCGGCAGGCCGTCTTTGTTGGTCAGGGTGATGGTGTAAGTGATCTCGCCACCTTCGGTGACCGAAGGGGTCGCGGTCA    <  1:514607/150‑1
                                                                                                                                                  TGCCATTAGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAATGCACTGTGGTTGTTGATCGGCAGGCCGTCTTTGTTGGTCAGGGTGATGGTGTAAGTGATCTCGCCACCTTCGGTGACCGAAGGGGTCGCGGTCA    >  2:665695/1‑150
                                                                                                                                                   GCCATTAGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAATGCACTGTGGTTGTTGATCGGCAGGCCGTCTTTGT                                                                >  2:287250/1‑89
                                                                                                                                                   GCCATTAGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAATGCACTGTGGTTGTTGATCGGCAGGCCGTCTTTGT                                                                <  1:287250/89‑1
                                                                                                                                                    CCATTAGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAATGCACTGGGGTTGTTGATCGGCAGGCCGTCTTTGTTGGTCAGGGTGATGGTGTAAGTGATCTCGCCACCTTCGGTGACCGAAGGGGTCGCGGTCAGC  >  1:74338/1‑150
                                                                                                                                                                                                                                                                                                          
CGTGGCCAAGTTGACCGCCACCCCGTCGGTCACCGAAGGCGGCGAGATCACTTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/203596‑203745
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgccATTAGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAATGCACTGTGGTTGTTGATCGGCAGGCCGTCTTTGTTGGTCAGGGTGATGGTGTAAGTGATCTCGCCACCTTCGGTGACCGAAGGGGTCGCGGTCAGC  <  NC_002947/207772‑207625

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.