New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 433231 = | 31 (0.980) | 3 (0.100) | 3/238 | NT | 7.9% | coding (1972/2178 nt) | glcB | malate synthase G |
? | NC_002947 | 433287 = | 40 (1.320) | coding (1916/2178 nt) | glcB | malate synthase G |
CAGCTGCTGGCCAACTGGCTGCGCCACGGCGTGGTCAGCCAGGAACAGGTGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/433285‑433231 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggGCAGAAATGCGCAGGGTGGCACGGTCTTCCATCAGGCCGACGTTGTTGATGTCCGGCACCTTCGAGCAACCCACGCCCTGGTCGATCCAGCGCAC > NC_002947/433287‑433381 CAGCTGCTGGCCAACTGGCTGCGCCACGGCGTGGTCAGCCAGGAACAGGTGCTGGGCAGAAATGCGCAGGGTGGCACGGTCTTCCATCAGGCCGACGTTGTTGATGTCCGGCACCTTCGAGCAACCCACGCCCTGGTCGATCCAGCGCAC > 1:188571/1‑150 TGGCCAACTGGCTGCGCCACGGCGTGGTCAGCCAGGAACAGGTGCTGGGCAGAAATGCGCAGGGTGGCACGGTCTTCCATCAGGCCGACGTTGTTGATGTCCGGCACCTTCGAGCAACCCACGCCCTGGTCGATC > 1:572005/1‑135 TGGCCAACTGGCTGCGCCACGGCGTGGTCAGCCAGGAACAGGTGCTGGGCAGAAATGCGCAGGGTGGCACGGTCTTCCATCAGGCCGACGTTGTTGATGTCCGGCACCTTCGAGCAACCCACGCCCTGGTCGATC < 2:572005/135‑1 CAGCTGCTGGCCAACTGGCTGCGCCACGGCGTGGTCAGCCAGGAACAGGTGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/433285‑433231 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggGCAGAAATGCGCAGGGTGGCACGGTCTTCCATCAGGCCGACGTTGTTGATGTCCGGCACCTTCGAGCAACCCACGCCCTGGTCGATCCAGCGCAC > NC_002947/433287‑433381 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |