New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 433231 = | 31 (0.980) | 3 (0.100) | 3/238 | NT | 7.9% | coding (1972/2178 nt) | glcB | malate synthase G |
? | NC_002947 | 433287 = | 40 (1.320) | coding (1916/2178 nt) | glcB | malate synthase G |
ATAACCGTTCGGTTGCTTGCCACCTTCCACTACCAGTTCCACAGCCGCCTGGAACGCCACGTTGTCGTCGAAGTTGGGCGCCATCGGGCGGTACAGGGGGTCGCCAGCGTTCTGCTGATCGACCACCACGGCCATGCGCTTGAGGCTTTCCAGCACCTGTTCCTGGCTGACCACGCCGTGGCGCAGCCAGTTGGCCAGCAGCTGGGCAGAAATGCGCAGGGTGGCACGGTCTTCCATCAGGCCGACGTTGTTGATGTCCGGCACCTTCGAGCAACCCACGCCCTGGTCGATCC > NC_002947/433082‑433374 | ataACCGTTCGGTTGCTTGCCACCTTCCACTACCAGTTCCACAGCCGCCTGGAACGCCACGTTGTCGTCGAAGTTGGGCGCCATCGGGCGGTACAGGGGGTCGCCAGCGTTCTGCTGATCGACCACCACGGCCATGCGCTTGAGGCTTTc > 1:735136/1‑150 (MQ=255) aaCCGTTCGGTTGCTTGCCACCTTCCACTACCAGTTCCACAGCCGCCTGGAACGCCACGTTGTCGTCGAAGTTGGGCGCCATCGGGCGGTACAGGGGGTCGCCAGCGTTCTGCTGATCGACCACCACGGCCATGCGCTTGAGGCTTTCCa < 2:66695/150‑1 (MQ=255) ttgcCACCTTCCACTACCAGTTCCACAGCCGCCTGGAACGCCACGTTGTCGCCGAAGTTGGGCGCCATCGGGCGGTACAGGGGGTCGCCAGCGTTCTGCTGATCGACCACCACGGCCATGCGCTTGAGGCTTTCCAGCACCTGTTCCTgg > 2:670321/1‑150 (MQ=255) ccACCTTCCACTACCAGTTCCACAGCCGCCTGGAACGCCACGTTGTCGTCGAAGTTGGGCGCCATCGGGCGGTACAGGGGGTCGCCAGCGTTCTGCTGATCGACCACCACGGCCATGCGCTTGAGGCTTTCCAGCACCTGTTCCTGGCTg < 1:705116/150‑1 (MQ=255) aCCTTCCACTACCAGTTCCACAGCCGCCTGGAACGCCACGTTGTCGTCGAAGTTGGGCGCCATCGGGCGGTACAGGGGGTCGCCAGCGTTCTGCTGATCGACCACCACGGCCATGCGCTTGAGGCTTTCCAGCACCTGTTCCTGGCTGAc > 2:58331/1‑150 (MQ=255) cTACCAGTTCCACAGCCGCCTGGAACGCCACGTTGTCGTCGAAGTTGGGCGCCATCGGGCGGTACAGGGGGTCGCCAGCGTTCTGCTGATCGACCACCACGGCCATGCGCTTGAGGCTTTCCAGCACCTGTTCCTGGCTGACCACGCCGt < 1:67344/150‑1 (MQ=255) ccAGTTCCACAGCCGCCTGGAACGCCACGTTGTCGTCGAAGTTGGGCGCCATCGGGCGGTACAGGGGGTCGCCAGCGTTCTGCTGATCGACCACCACGGCCATGCGCTTGAGGCTTTCCAGCACCTGTTCCTGGCTGACCACGCCGTGgc > 2:414250/1‑150 (MQ=255) gTTCCACAGCCGCCTGGAACGCCACGTTGTAGTCGAAGTTGGGCGCCATCGGGCGGTACAGGGGGTCGCCAGCGTTCTGCTGATCGACCACCACGGCCATGCGCTTGAGGCTTTCCAGCACCTGTTCCTGGCTGACCACGCCGTGGCGCa > 1:835316/1‑150 (MQ=255) aCGCCACGTTGTCGTCGAAGTTGGGCGCCATCGGGCGGTACAGGGGGTCGCCAGCGTTCTGCTGATCGACCACCACGGCCATGCGCTTGAGGCTTTCCAGCACCTGTTCCTGGCTGACCACGCCGTGGCGCAGCCAGTTGGCCAGCAGCt < 1:682186/150‑1 (MQ=255) gtgcgctggatcgaccagggcgtgggttgctcgaaggtgccggacatcaacaacgtcggcctgatggaagaccgtgccaccctgcgcatttctgcCCAGCACCTGTTCCTGGCTGACCACGCCGTGGCGCAGCCAGTTGGCCAGCAGCTg > 1:188571‑M1/96‑150 (MQ=255) gCCACGTTGTCGTCGAAGTTGGGCGCCATCGGGCGGTACAGGGGGTCGCCAGCGTTCTGCTGATCGACCACCACGGCCATGCGCTTGAGGCTTTCCAGCACCTGTTCCTGGCTGACCACGCCGTGGCGCAGCCAGTTGGCCAGCAGCTgg < 2:71206/150‑1 (MQ=255) gatcgaccagggcgtgggttgctcgaaggtgccggacatcaacaacgtcggcctgatggaagaccgtgccaccctgcgcatttctgcCCAGCACCTGTTCCTGGCTGACCACGCCGTGGCGCAGCCAGTTGGCca > 1:572005‑M1/88‑135 (MQ=255) gatcgaccagggcgtgggttgctcgaaggtgccggacatcaacaacgtcggcctgatggaagaccgtgccaccctgcgcatttctgcCCAGCACCTGTTCCTGGCTGACCACGCCGTGGCGCAGCCAGTTGGCca < 2:572005‑M1/48‑1 (MQ=255) gtcgAAGTTGGGCGCCATCGGGCGGTACAGGGGGTCGCCAGCGTTCTGCTGATCGACCACCACGGCCATGCGCTTGAGGCTTTCCAGCACCTGTTCCTGGCTGACCACGCCGTGGCGCAGCCAGTTGGCCAGCAGCTGGGCAGAAATgcg < 2:735136/150‑1 (MQ=255) gggCGCCATCGGGCGGTACAGGGGGTCGCCAGCGTTCTGCTGATCGACCACCACGGCCATGCGCTTGAGGCTTTCCAGCACCTGTTCCTGGCTGACCACGCCGTGGCGCAGCCAGTTGGCCAGCAGCTGGGCAGAAATGCGCAGGGTGGc < 1:414250/150‑1 (MQ=255) ggCGCCATCGGGCGGTACAGGGGGTCGCCAGCGTTCTGCTGATCGACCACCACGGCCATGCGCTTGAGGCTTTCCAGCACCTGTTCCTGGCTGACCACGCCGTGGCGCAGCCAGTTGGCCAGCAGCTGGGCAGAAATGCGCAGGGTGGCa < 1:58331/150‑1 (MQ=255) ggCACCATCGGGCGGTACAGGGGGTCGCCAGCGTTCTGCTGATCGACCACCACGGCCATGCGCTTGAGGCTTTCCAGCACCTGTTCCTGGCTGACCACGCCGTGGCGCAGCCAGTTGGCCAGCAGCTGGGCAGAAGTGCGCAGGGTGGCa > 2:493790/1‑150 (MQ=255) gcgcCATCGGGCGGTACAGGGGGTCGCCAGCGTTCTGCTGATCGACCACCACGGCCATGCGCTTGAGGCTTTCCAGCACCTGTTCCTGGCTGACCACGCCGTg < 1:253352/103‑1 (MQ=255) gcgcCATCGGGCGGTACAGGGGGTCGCCAGCGTTCTGCTGATCGACCACCACGGCCATGCGCTTGAGGCTTTCCAGCACCTGTTCCTGGCTGACCACGCCGTg > 2:253352/1‑103 (MQ=255) cATCGGGCGGTACAGGGGGTCGCCAGCGTTCTGCTGATCGACCACCACGGCCATGCGCTTGAGGCTTTCCAGCACCTGTTCCTGGCTGACCACGCCGTGGCGCAGCCAGTTGGCCAGCAGCTGGGCAGAAATGCGCAGGGTGGCACGGTc > 2:731634/1‑150 (MQ=255) aTCGGGCGGTACAGGGGGTCGCCAGCGTTCTGCTGATCGACCACCACGGCCATGCGCTTGAGGCTTTCCAGCACCTGTTCCTGGCTGACCACGCCGTGGCGCAGCCAGTTGGCCAGCAGCTGGGCAGAAATGCGCAGGGTGGCACGGTCt > 1:792344/1‑150 (MQ=255) gggCGGTACAGGGGGTCGCCAGCGTTCTGCTGTTCGACCACCACGGCCATGCGCTTGAGGCTTTCCAGCACCTGTTCCTGGCTGACCACGCCGTGGCGCAGCCAGTTGGCCAGCAGCTGGGCAGAAATGCGCAGGGTGGCACGGTCTTcc < 2:747604/150‑1 (MQ=255) tACAGGGGGTCGCCAGCGTTCTGCTGATCGACCACCACGGCCATGCGCTTGAGGCTTTCCAGCACCTGTTCCTGGCTGACCACGCCGTGGCGCAGCCAGTTGGCCAGCAGCTGGGCAGAAATGCGCAGGGTGGCACGGTCTTCCacgcag < 1:670321/150‑6 (MQ=255) tCGCCAGCGTTCTGCTGATCGACCACCACGGCCATGCGCTTGAGGCTTTCCAGCACCTGTTCCTGGCTGACCACGCCGTGGCGCAGCCAGTTGGCCAGCAGCTGGGCAGAAATGCGCAGGGTGGCACGGTCTTCCATCAGGCCGACgttg < 1:572905/150‑1 (MQ=255) gCCAGCGTTCTGCTGATCGACCACCACGGCCATGCGCTTGAGGCTTTCCAGCACCTGTTCCTGGCTGACCACGCCGTGGCGCAGCCAGTTGGCCAGCAGCTGGGCAGAAATGCGCAGGGTGGCACGGTCTTCCATCAGGCCGACgttgtt < 2:835316/150‑1 (MQ=255) cAGCGTTCTGCTGATCGACCACCACGGCCATGCGCTTGAGGCTTTCCAGCACCTGTTCCTGGCTGACCACGCCGTGGCGCAGCCAGTTGGCCAGCAGCTGGGCAGAAATGCGCAGGGTGGCACGGTCTTCCATCAGGCCGACgttgt < 2:433657/147‑1 (MQ=255) cAGCGTTCTGCTGATCGACCACCACGGCCATGCGCTTGAGGCTTTCCAGCACCTGTTCCTGGCTGACCACGCCGTGGCGCAGCCAGTTGGCCAGCAGCTGGGCAGAAATGCGCAGGGTGGCACGGTCTTCCATCAGGCCGACgttgt > 1:433657/1‑147 (MQ=255) aGCGTTCTGCTGATCGACCACCACGGCCATGCGCTTGAGGCTTTCCAGCACCTGTTCCTGGCTGACCACGCCGTGGCGCAGCCAGTTGGCCAGCAGCTGGGCAGAAATGCGCAGGGTGGCACGGTCTTCCATc < 2:339574/133‑1 (MQ=255) aGCGTTCTGCTGATCGACCACCACGGCCATGCGCTTGAGGCTTTCCAGCACCTGTTCCTGGCTGACCACGCCGTGGCGCAGCCAGTTGGCCAGCAGCTGGGCAGAAATGCGCAGGGTGGCACGGTCTTCCATc > 1:339574/1‑133 (MQ=255) aGCGTTCTGCTGATCGACCACCACGGCCATGCGCTTGAGGCTTTCCAGCACCTGTTCCTGGCTGACCACGCCGTGGCGCAGCCAGTTGGCCAGCAGCTGGGCAGAAATGCGCAGGGTGGCACGGTCTTCCATCAGGCCGACGTTGTTGAt > 2:628812/1‑150 (MQ=255) accacGGCCATGCGCTTGAGGCTTTCCAGCACCTGTTCCTGGCTGACCACGCCGTGGCGCAGCCAGTTGGCCAGCAGCTGGGCAGAAATGCGCAGGGTGGCACGGTCTTCCATCAGGCCGACGTTGTTGATGTCCGGCACCTTCGAGCaa < 2:792344/150‑1 (MQ=255) gcTTGAGGCTTTCCAGCACCTGTTCCTGGCTGACCACGCCGTGGCGCAGCCAGTTGGCCAGCAGCTGGGCAGAAATGCGCAGGGTGGCACGGTCTTCCATCAGGCCGACGTTGTTGATGTCCGGCACCTTCGAGCAACCCACGCCCTGGt > 2:252440/1‑150 (MQ=255) tGAGGCTTTCCAGCACCTGTTCCTGGCTGACCACGCCGTGGCGCAGCCAGTTGGCCAGCAGCTGGGCAGAAATGCGCAGGGTGGCACGGTCTTCCATCAGGCCGACGTTGTTGATGTCCGGCACCTTCGAGCAACCCACGCCCTGGTCGa < 1:252440/150‑1 (MQ=255) gAGGCTTTCCAGCACCTGTTCCTGGCTGACCACGCCGTGGCGCAGCCAGTTGGCCAGCAGCTGGGCAGAAATGCGCAGGGTGGCACGGTCTTCCATCAGGCCGACGTTGTTGATGTCCGGCACCTTCGAGCAACCCACGCCCTGGTc > 2:306284/1‑147 (MQ=255) gAGGCTTTCCAGCACCTGTTCCTGGCTGACCACGCCGTGGCGCAGCCAGTTGGCCAGCAGCTGGGCAGAAATGCGCAGGGTGGCACGGTCTTCCATCAGGCCGACGTTGTTGATGTCCGGCACCTTCGAGCAACCCACGCCCTGGTc < 1:306284/147‑1 (MQ=255) ggCTTTCCAGCACCTGTTCCTGGCTGACCACGCCGTGGCGCAGCCAGTTGGCCAGCAGCTGGGCAGAAATGCGCAGGGTGGCACGGTCTTCCATCAGGCCGACGTTGTTGATGTCCGGCACCTTCGAGCAACCCACGCCCTGGTCGATcc > 1:721103/1‑150 (MQ=255) | ATAACCGTTCGGTTGCTTGCCACCTTCCACTACCAGTTCCACAGCCGCCTGGAACGCCACGTTGTCGTCGAAGTTGGGCGCCATCGGGCGGTACAGGGGGTCGCCAGCGTTCTGCTGATCGACCACCACGGCCATGCGCTTGAGGCTTTCCAGCACCTGTTCCTGGCTGACCACGCCGTGGCGCAGCCAGTTGGCCAGCAGCTGGGCAGAAATGCGCAGGGTGGCACGGTCTTCCATCAGGCCGACGTTGTTGATGTCCGGCACCTTCGAGCAACCCACGCCCTGGTCGATCC > NC_002947/433082‑433374 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |