New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1021643 | 34 (1.070) | 5 (0.170) | 5/234 | NT | 14.1% | coding (347/1011 nt) | dppB | dipeptide ABC transporter permease |
? | NC_002947 | = 1021694 | 29 (0.970) | coding (296/1011 nt) | dppB | dipeptide ABC transporter permease |
GGAAACCGGGGTCCAGCCCAGGCTCACGGAGAAGAACATGATCAGGATCAGGCCCCACCAGAAAATCGGCATCGAGTAGCCGGCCAGTGATATGCCCATGACCCCGTGGTCGAACAGCGAACCGCGCTTGAGTGCGGCGATTACACCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1021492‑1021643 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggccaCCCTGGAACTGGCCTTCGCCGCCCTGCTGTTCGCCGGCGTCGTCGGCCTGCTGGCCGGTGTAATCGCCGCACTCAAGCGCGGTTCGCTGTTCGACCACGGGGTCATGGGCATATCACTGGCCGGCTACTCGATGCCGATTTTCTGG < NC_002947/1021694‑1021549 GGAAACCGGGGTACAGCCCAGGCTCACGGAGAAGAACATGATCAGGATCAGGCCCCACCAGAAAATCGGCATCGAGTAGCCGGCCAGTGATATGCCCATGACCCCGTGGTCGAACAGCGAACCGCGCTTGAGTGCGGCGATTACACCGGC < 1:631159/150‑1 GAACATGATCAGGATCAGGCCCCACCAGAAAATCGGCATCGAGTAGCCGGCCAGTGATATGCCCATGACCCCGTGGTCGAACAGCGAACCGCGCTTGAGTGCGGCGATTACACCGGCCACCCTGGAACTGGCCTTCGCCGCCCTGCTGTT > 2:287685/1‑150 GGCCCCACCAGAAAATCGGCATCGAGTAGCCGGCCAGTGATATGCCCATGACCCCGTGGTCGAACAGCGAACCGCGCTTGAGTGCGGCGATTACACCGGCCA‑‑‑‑‑G‑‑CAGGCCTTCGCCGCCCTGCTGTTCGCCGGCGTCGTCG > 1:766677/1‑140 GGCCCCACCAGAAAATCGGCATCGAGTAGCCGGCCAGTGATATGCCCATGACCCCGTGGTCGAACAGCGAACCGCGCTTGAGTGCGGCGATTACACCGGCCA‑‑‑‑‑G‑‑CAGGCCTTCGCCGCCCTGCTGTTCGCCGGCGTCGTCG < 2:766677/140‑1 AGAAAATCGGCATCGAGTAGCCGGCCAGTGATATGCCCATGACCCCGTGGTCGAACAGCGAACCGCGCTTGAGTGCGGCGATTACACCGGCCACCCTGGAACTGGCCTTCGCCGCCCTGCTGTTCGCCGGCGTCGTCGGCCTGCTGGCCG < 2:595187/150‑1 AAAATCGGCATCGAGTAGCCGGCCAGTGATATGCCCATGACCCCGTGGTCGAACAGCGAACCGCGCTTGAGTGCGGCGATTACACCGGCCACCCTGGAACTGGCCTTCGCCGCCCTGCTGTTCGCCGGCGTCGTCGGCCTGCTGGCCGGT < 1:287685/150‑1 GCCACCCTGGAACTGGCCTTCGCCGCCCTGCTGTTCGCCGGCGTCGTCGGCCTGCTGGCCGGTGTAATCGCCGCACTCAAGCGCGGTTCGCTGTTCGACCACGGGGTCATGGGCATATCACTGGCCGGCTACTCGATGCCGATTTTCTGG > 2:252403/1‑150 GGAAACCGGGGTCCAGCCCAGGCTCACGGAGAAGAACATGATCAGGATCAGGCCCCACCAGAAAATCGGCATCGAGTAGCCGGCCAGTGATATGCCCATGACCCCGTGGTCGAACAGCGAACCGCGCTTGAGTGCGGCGATTACACCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1021492‑1021643 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggccaCCCTGGAACTGGCCTTCGCCGCCCTGCTGTTCGCCGGCGTCGTCGGCCTGCTGGCCGGTGTAATCGCCGCACTCAAGCGCGGTTCGCTGTTCGACCACGGGGTCATGGGCATATCACTGGCCGGCTACTCGATGCCGATTTTCTGG < NC_002947/1021694‑1021549 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |