New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 102164334 (1.070)5 (0.170) 5/234 NT 14.1% coding (347/1011 nt) dppB dipeptide ABC transporter permease
?NC_002947 = 1021694 29 (0.970)coding (296/1011 nt) dppB dipeptide ABC transporter permease

CCAGGCTCACGGAGAAGAACATGATCAGGATCAGGCCCCACCAGAAAATCGGCATCGAGTAGCCGGCCAGTGATATGCCCATGACCCCGTGGTCGAACAGCGAACCGCGCTTGAGTGCGGCGATTACACCGGCCAGCAGGCCGACGACGCCGGCGAACAGCAGGGCGGCGAAGGCCAGTTCCAGGGTGGCCGGGAACAGGGTGAGGAACTCGCGCCACACGCTTTCGCGGGTGCGCAGCGATTCGCCAAGGTCACCCTGGGCAAGTTTGCCGACGTAGTCC  >  NC_002947/1021509‑1021789
                                                                                                                                      |                                                                                                                                                  
ccAGGCTCACGGAGAAGAACATGATCAGGATCAGGCCCCACCAGAAAATCGGCATCGAGTAGCCGGCCAGTGATATGCCCATGCCCCCGTGGTCGAACAGCGAACCGCGCTTGAGTGCGGTGCTTACACCGGCCAGCAGGCCGACGACGc                                                                                                                                     <  1:451653/150‑1 (MQ=255)
ccAGGCTCACGGAGAAGAACATGATCAGGATCAGGCCCCACCAGAAAATCGGCATCGAGTAGCCGGCCAGTGATATGCCCATGACCCCGTGGTCGAACAGCGAACCGCGCTTGAGTGCGGCGATTACACCGGCCAGCAGGCCGACGACGc                                                                                                                                     <  1:90081/150‑1 (MQ=255)
    gCTCACGGAGAAGAACATGATCAGGATCAGGCCCCACCAGAAAATCGGCATCGAGTAGCCGGCCAGTGATATGCCCATGACCCCGTGGTCGAACAGCGAACCGCGGTTGAGTGCGGCGATTACACCGGCCAGCAGGCCGACGACGCCGGc                                                                                                                                 >  1:281624/1‑150 (MQ=255)
        aCGGAGAAGAACATGATCAGGATCAGGCCCCACCAGAAAATCGGCATCGAGTAGCCGGCCAGTGATATGCCCATGACCCCGTGGTCGAACAGCGAACCGCGCTTGAGTGCGGCGATTACACCGGCCAGCAGGCCGACGACGCCGGCGAAc                                                                                                                             >  2:727199/1‑150 (MQ=255)
              aagaaCATGATCAGGATCAGGCCCCACCAGAAAATCGGCATCGAGTAGCCGGCCAGTGATATGCCCATGACCCCGTGGTCGAACAGCGAACCGCGCTTGAGTGCGGCGATTACACCGGCCAGCAGGCCGACGACGCCGGCGAACAGCAgg                                                                                                                       <  2:835774/150‑1 (MQ=255)
                gaaCATGATCAGGATCAGGCCCCACCAGAAAATCGGCATCGAGTAGCCGGCCAGTGATATGCCCATGACCCCGTGGTCGAACAGCGAACCGCGCTTGAGTGCGGCGATTACACCGGCCAccctggaactggccttcgccgccctgctgtt                                                                                                                     >  2:287685‑M1/1‑119 (MQ=255)
                gaaCATGATCAGGATCAGGCCCCACCAGAAAATCGGCATCGAGTAGCCGGCCAGTGATATGCCCATGACCCCGTGGTCGAACAGCGAACCGCGCTTGAGTGCGGCGATTACACCGGCCAGCAGGCCGACGACGCCGGCGAACAGCAGggc                                                                                                                     >  1:532205/1‑150 (MQ=255)
                              tcaggCCCCACCAGAAAATCGGCATCGAGTAGCCGGCCAGTGATATGCCCATGACCCCGTGGTCGAACAGCGAACCGCGCTTGAGTGCGGCGATTACACCGGCCAGCAGGCCGACGACGCCGGCGAACAGCAGGGCGGCGAAGGCCAGtt                                                                                                       >  1:224731/1‑150 (MQ=255)
                                 ggCCCCACCAGAAAATCGGCATCGAGTAGCCGGCCAGTGATATGCCCATGACCCCGTGGTCGAACAGCGAACCGCGCTTGAGTGCGGCGATTACACCGGCCAgcaggccttcgccgccctgctgttcgccggcgtcgtcg                                                                                                              <  2:766677‑M1/140‑39 (MQ=255)
                                 ggCCCCACCAGAAAATCGGCATCGAGTAGCCGGCCAGTGATATGCCCATGACCCCGTGGTCGAACAGCGAACCGCGCTTGAGTGCGGCGATTACACCGGCCAgcaggccttcgccgccctgctgttcgccggcgtcgtcg                                                                                                              >  1:766677‑M1/1‑102 (MQ=255)
                                 ggCCCCACCAGAAAATCGGCATCGAGTAGCCGGCCAGTGATATGCCCATGACCCCGTGGTCGAACAGCGAACCGCGCTTGAGTGCGGCGATTACACCGGCCAGCAGGCCGACGACGCCGGCGAACAGCAGGGCGGCGAAGGCCAGTTCCa                                                                                                    <  1:659369/150‑1 (MQ=255)
                                   ccccACCAGAAAATCGGCATCGAGTAGCCGGCCAGTGATATGCCCATGACCCCGTGGTCGAACAGCGAACCGCGCTTGAGTGCGGCGATTACACCGGCCAGCAGGCCGACGACGCCGGCGAACAGCAGGGCGGCGAAGGCCAGTTCCAgg                                                                                                  <  1:727199/150‑1 (MQ=255)
                                    cccACCAGAAAATCGGCATCGAGTAGCCGGCCAGTGATATGCCCATGACCCCGTGGTCGAACAGCGAACCGCGCTTGAGTGCGGCGATTACACCGGCCAGCAGGCCGACGACGCCGGCGAACAGCAGGGCGGCGAAGGCCAGTTCCAggg                                                                                                 >  2:73435/1‑150 (MQ=255)
                                    cccACCAGAAAATCGGCATCGAGTAGCCGGACAGTGATATGCCCATGACCCCGTGGTCGAACAGCGAACCGCGCTTGAGTGCGGCGATTACACCGGCCAGCAGGCCGACGACGCCGGCGAACAGCAGGGCGGCGCAGGCCAGTTCCAggg                                                                                                 >  2:311500/1‑150 (MQ=255)
                                        ccaGAAAATCGGCATCGAGTAGCCGGCCAGTGATATGCCCATGACCCCGTGGTCGAACAGCGAACCGCGCTTGAGTGCGGCGATTACACCGGCCAGCAGGCCGACGACGCCGGCGAACAGCAGGGCGGCGAAGGCCAGTTCCAGGGtggc                                                                                             >  2:252403‑M2/1‑146 (MQ=255)
                                          aGAAAATCGGCATCGAGTAGCCGGCCAGTGATATGCCCATGACCCCGTGGTCGAACAGCGAACCGCGCTTGAGTGCGGCGATTACACCGGCCAccctggaactggccttcgccgccctgctgttcgccggcgtcgtcggcctgctggccg                                                                                           <  2:595187‑M1/150‑58 (MQ=255)
                                            aaaaTCGGCATCGAGTAGCCGGCCAGTGATATGCCCATGACCCCGTGGTCGAACAGCGAACCGCGCTTGAGTGCGGCGATTACACCGGCCAccctggaactggccttcgccgccctgctgttcgccggcgtcgtcggcctgctggccggt                                                                                         <  1:287685‑M1/150‑60 (MQ=255)
                                                tCGGCATCGAGTAGCCGGCCAGTGATATGCCCATGACCCCGTGGTCGAACAGCGAACCGCGCTTGAGTGCGGCGATTACACCGGCCAGCAGGCCGACGACGc                                                                                                                                     <  2:506505/102‑1 (MQ=255)
                                                tCGGCATCGAGTAGCCGGCCAGTGATATGCCCATGACCCCGTGGTCGAACAGCGAACCGCGCTTGAGTGCGGCGATTACACCGGCCAGCAGGCCGACGACGc                                                                                                                                     >  1:506505/1‑102 (MQ=255)
                                                  ggCATCGAGTAGCCGGCCAGTGATATGCCCATGACCCCGTGGTCGAACAGCGAACCGCGCTTGAGTGCGGCGATTACACCGGCCAGCAGGCCGACGACGCCGGCGAACAGCAGGGCGGCGAAGGCCAGTTCCAGGGTGGCCGGGAACAgg                                                                                   <  2:224731/150‑1 (MQ=255)
                                                      gcGAGTAGCCGGCCAGTGATATGCCCATGACCCCGTGGTCGAACAGCGAACCGCGCTTGAGTGCGGCGATTACACCGGCCAGCAGGCCGACGACGCCGGCGAACAGCAGGGCGGCGAAGGCCAGTTCCAGGGTGGCCGGGAACAGGGTGa                                                                               <  2:103397/149‑1 (MQ=255)
                                                       cGAGTAGCCGGCCAGTGATATGCCCATGACCCCGTGGTCGAACAGCGAACCGCGCTTGAGTGCGGCGATTACACCGGCCAGCAGGCCGACGACGCCGGCGAACAGCAGGGCGGCGAAGGCCAGTTCCAGGGTGGCCGGGAACAGGGTGAg                                                                              <  2:532205/150‑1 (MQ=255)
                                                         aGTAGCCGGCCAGTGATATGCCCATGACCCCGTGGTCGAACAGCGAACCGCGCTTGAGTGCGGCGATTACACCGGCCAGCAGGCCGACGACGCCGGCGAACAGCAGGGCGGCGAAGGCCAGTTCCAGGGTGGCCGGGAACAGGGTGAGGa                                                                            >  2:163279/1‑150 (MQ=255)
                                                               cGGCCAGTGATATGCCCATGACCCCGTGGTCGAACAGCGAACCGCGCTTGAGTGCGGCGATTACACCGGCCAGCAGGCCGACGACGCCGGCGAACAGCAGGGCGGCGAAGGCCAGTTCCAGGGTGGCCGGGAACAGGGTGAGGAACTcgc                                                                      <  1:3356/150‑1 (MQ=255)
                                                                    aGTGATATGCCCATGACCCCGTGGTCGAACAGCGAACCGCGCTTGAGTGCGGCGATTACACCGGCCAGCAGGCCGACGACGCCGGCGAACAGCAGGGCGGCGAAGGCCAGTTCCAGGGTGGCCGGGAACAGGGTGAGGAACTCGCGCcac                                                                 >  1:741539/1‑150 (MQ=255)
                                                                        atatGCCCATGACCCCGTGGTCGAACAGCGAACCGCGCTTGAGTGCGCCGATTACACCGGCCAGCAGGCCGACGACGCCGGCGAACAGCAGGGCGGCGAAGGCCAGTTCCAGGGTGCCCGGGAACAGGGTGAGGAACTCGCGCCACACGc                                                             >  2:190280/1‑150 (MQ=255)
                                                                        atagGCCCATGACCCCGTGGTCGAACAGTGAACCGCGCGTGAGGGCGGCGATTACACCGGCCAGCAGGCCGACGACGCGGGCGAACAGCAGGGCGGCAAAGGCCAGTTCCAGGGTGGCCGGGAACATTGTGAGTAACTCGCGCCACACGc                                                             <  2:71745/150‑1 (MQ=255)
                                                                              ccATGACCCCGTGGTCGAACAGCGAACCGCGCTTGAGTGCGGCGATTACACCGGCCAGCAGGCCGACGACGCCGGCGAACAGCAGGGCGGCGAAGGCCAGTTCCAGGGTGGCCGGGAACAGGGTGAGGAACTCGCGCCACACGCTTTcgc                                                       >  2:501228/1‑150 (MQ=255)
                                                                                aTGACCCCGTGGTCGAACAGCGAACCGCGCTTGAGTGCGGCGATTACACCGGCCAGCAGGCCGACGACGCCGGCGAACAGCAGGGCGGCGAAGGc                                                                                                            >  2:217427/1‑95 (MQ=255)
                                                                                aTGACCCCGTGGTCGAACAGCGAACCGCGCTTGAGTGCGGCGATTACACCGGCCAGCAGGCCGACGACGCCGGCGAACAGCAGGGCGGCGAAGGc                                                                                                            <  1:217427/95‑1 (MQ=255)
                                                                                   aCCCCGTGGTCGAACAGCGAACCGCGCTTGAGTGCGGCGATTACACCGGCCAGCAGGCCGACGACGCCGGCGAACAGCAGGGCGGCGAAGGCCAGTTCCAGGGTGGCCGGGAACAGGGTGAGGAACTCGCGCCACACGCTTTCGCGGGTg                                                  >  2:104790/1‑150 (MQ=255)
                                                                                              gAACAGCGAACCGCGCTTGAGTGCGGCGATTACACCGGCCAGCAGGCCGACGACGCCGGCGAACAGCAGGGCGGCGAAGGCCAGTTCCAGGGTGGCCGGGAACAGGGTGAGGAACTCGCGCCACACGCTTTCGCGGGTGCGCAGCGATTc                                       >  1:115565/1‑150 (MQ=255)
                                                                                              gAACAGCGAACCGCGCTTGAGTGCGGCGATTACACCGGCCAGCAGGCCGACGACGCCGGCGAACAGCAGGGCGGCGAAGGCCAGTTCCAGGGTGGCCGGGAACAGGGTGAGGAACTCGCGCCACACGCTTTCGCGGGTGCGCAGCGATTc                                       >  2:711160/1‑150 (MQ=255)
                                                                                                   gCGAACCGCGCTTGAGTGCGGCGATTACACCGGCCAGCAGGCCGACGACGCCGGCGAACAGCAGGGCGGCGAAGGCCAGTTCCAGGGTGGCCGGGAACAGGGTGAGGAACTCGCGCCACACGCTTTCGCGGGTGCCAAGCTATTCGCCaa                                  >  2:450024/1‑150 (MQ=255)
                                                                                                         cgcgCTTGAGTGCGGCGATTACACCGGCCAGCAGGCCGACGACGCCGGCGAACAGCAGGGCGGCGAAGGCCAGTTCCAGGGTGGCCGGGAACAGGGTGAGGAACTCGCGCCACACGCTTTCGCGGGTGCGCAGCGATTCGCCAAGGTCAc                            <  1:163279/150‑1 (MQ=255)
                                                                                                                   tGCGGCGATTACACCGGCCAGCAGGCCGACGACGCCGGCGAACAGCAGGGCGGCGAAGGCCAGTTCCAGGGTGGCCGGGAACAGGGTGAGGAACTCGCGCCACACGCTTTCGCGGGTGCGCAGCGATTCGCCAAGGTCACCCTGGGCAAg                  >  1:670706/1‑150 (MQ=255)
                                                                                                                           ttACACCGGCCAGCAGGCCGACGACGCCGGCGAACAGCAGGGCGGCGAAGGCCAGTTCCAGGGTGGCCGGGAACAGGGTGAGGAACTCGCGCCACACGCTTTCGCGGGTGCGCAGCGATTCGCCAAGGTCACCCTGGGCAAGTTTGCCGa          >  1:666827/1‑150 (MQ=255)
                                                                                                                             acacCGGCCAGCAGGCCGACGACGCCGGCGAACAGCAGGGCGGCGAAGGCCAGTTCCAGGGTGGCCGGGAACa                                                                                     >  2:631233/1‑73 (MQ=255)
                                                                                                                             acacCGGCCAGCAGGCCGACGACGCCGGCGAACAGCAGGGCGGCGAAGGCCAGTTCCAGGGTGGCCGGGAACa                                                                                     <  1:631233/73‑1 (MQ=255)
                                                                                                                               acCGGCCAGCAGGCCGACGACGCCGGCGAACAGCAGGGCGGCGAAGGCCAGTTCCAGGGtggccggtgtaatcgccgcactcaagcgcggttcgctgttcgaccacggggtcatgggcatatcactggccggctactcgatgccgatttt      <  1:287685‑M2/150‑92 (MQ=255)
                                                                                                                               acCGGCCAGCAGGCCGACGACGCCGGCGAACAGCAGGGCGGCGAAGGCCAGTTCCAGGGTGGCCGGGAACAGGGTGAGGAACTCGCGCCACACGCTTTCGCGGGTGCGCAGCGATTCGCCAAGGTCACCCTGGGCAAGTTTGCCGACGTa      >  1:172132/1‑150 (MQ=255)
                                                                                                                                 cGGCCAGCAGGCCGACGACGCCGGCGAACAGCAGGGCGGCGAAGGCCAGTTCCAGGGtggccggtgtaatcgccgcactcaagcgcggttcgctgttcgaccacggggtcatgggcatatcactggccggctactcgatgccgattttct    <  2:595187‑M2/150‑94 (MQ=255)
                                                                                                                                   gCCAccctggaactggccttcgccgccctgctgttcgccggcgtcgtcggcctgctggccggtgtaatcgccgcactcaagcgcggttcgctgttcgaccacggggtcatgggcatatcactggccggctactcgatgccgattttctgg  >  2:252403‑M1/1‑4 (MQ=255)
                                                                                                                                     cagcagGCCGACGACGCCGGCGAACAGCAGGGCGGCGAAGGCCAGTTCCAGGGTGGCCGGGAACAGGGTGAGGAACTCGCGCCACACGCTTTCGCGGGTGCGCAGCGa                                          >  2:447769/1‑108 (MQ=255)
                                                                                                                                     cagcagGCCGACGACGCCGGCGAACAGCAGGGCGGCGAAGGCCAGTTCCAGGGTGGCCGGGAACAGGGTGAGGAACTCGCGCCACACGCTTTCGCGGGTGCGCAGCGa                                          <  1:447769/108‑1 (MQ=255)
                                                                                                                                      |                                                                                                                                                  
CCAGGCTCACGGAGAAGAACATGATCAGGATCAGGCCCCACCAGAAAATCGGCATCGAGTAGCCGGCCAGTGATATGCCCATGACCCCGTGGTCGAACAGCGAACCGCGCTTGAGTGCGGCGATTACACCGGCCAGCAGGCCGACGACGCCGGCGAACAGCAGGGCGGCGAAGGCCAGTTCCAGGGTGGCCGGGAACAGGGTGAGGAACTCGCGCCACACGCTTTCGCGGGTGCGCAGCGATTCGCCAAGGTCACCCTGGGCAAGTTTGCCGACGTAGTCC  >  NC_002947/1021509‑1021789

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.