New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1447792 =47 (1.480)4 (0.130) 4/238 NT 9.2% coding (1883/2178 nt) PP_1264 fusaric acid resistance protein
?NC_002947 1447836 = 34 (1.120)coding (1927/2178 nt) PP_1264 fusaric acid resistance protein

GCCACGGCTGCGACTCGGCATAGGCCGGGTGCACCGGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1447833‑1447792
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGACCACGCCATCGCCCGCGTGCAGGCCACCGACGAGCCATTCGCCCGGCACTTCGAC  >  NC_002947/1447836‑1447979
                                                                                                                                                                                          
GCCACGGCTGCGACTCGGCATAGGCCGGGTGCACCGGGGCGCGGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGACCACGCCATCGCCCGCGTGC                                     >  1:526794/1‑150
 CCACGGCTGCGACTCGGCATAGGCCGGGTGCACCGGGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGGCAGCAACCACGAGCGCGCACTGGTGGCCGTGGACCACGCCATCGCCCGCGTGC                                     >  1:688438/1‑150
  CACGGCTGCGACTCGGCATAGGCCGGGTGCACCGGGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTG                                                           <  1:53782/127‑1
  CACGGCTGCGACTCGGCATAGGCCGGGTGCACCGGGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTG                                                           >  2:53782/1‑127
                           gttctACCGGGGTGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGA                                                         <  1:100198/99‑1
                           gttctACCGGGGTGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGA                                                         >  2:100198/6‑104
                                   gttGCGCCAGGCAATCCGTGACATGGGAAGTCAACGGACCGCGCTATTTCTACATCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGACCACGCCATCGCCCGCGTGCAGGCCACCGACGAGCCATTCGCCCGGCACTTCGA   <  2:649659/147‑1
                                    GGGCGCCAGGCAATCCGTGTCATGGGCCGCGCGATCCGCCGGCGGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGACCACGCCATCGCCCGCCTGCAGGCCACCGACGAGCCATTCGCCCGGCACTTCGAC  <  2:708195/150‑1
                                                                                                                                                                                          
GCCACGGCTGCGACTCGGCATAGGCCGGGTGCACCGGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1447833‑1447792
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGACCACGCCATCGCCCGCGTGCAGGCCACCGACGAGCCATTCGCCCGGCACTTCGAC  >  NC_002947/1447836‑1447979

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.