New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1447792 =47 (1.480)4 (0.130) 4/238 NT 9.2% coding (1883/2178 nt) PP_1264 fusaric acid resistance protein
?NC_002947 1447836 = 34 (1.120)coding (1927/2178 nt) PP_1264 fusaric acid resistance protein

GGCAAGCCGCAGGTGCAGAGCCAGCTGATGGGCTGGATGTTCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGACCACGCCATCGCCCGCGTGCAGGCCACCGACGAGCCATTCGCCCGGCACTTCGAC  >  NC_002947/1447698‑1447979
                                                                                                                                          |                                                                                                                                               
ggcAAGCCGCAGGTGCAGAGCCAGCTGATGGGCTGGATGTTCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCgt                                                                                                                                      <  2:681179/150‑1 (MQ=255)
       cGCCGGTGCAGAGCCAGCTGATGGGCTGGATGTTCACCGTGCTGGCTATCGGCCACGCCGTCAGCGAGCTGCGCAAGGAGCAAGCCCGCACTTCTTGCCGGCCAACCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATgg                                                                                                                               <  2:634659/150‑1 (MQ=255)
                   gCCAGCTGATGGGCTGGATGTTCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGa                                                                                                                   <  1:369052/150‑1 (MQ=255)
                       gCTGATGGGCTGGATGTTCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATggg                                                                                                                              >  2:527518/1‑135 (MQ=255)
                       ccTGATGGGCTGGATGTTCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATggg                                                                                                                              <  1:527518/134‑1 (MQ=255)
                         tGATGGGCTGGATGTTCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGc                                                                                                             >  2:297058/1‑150 (MQ=255)
                                   gATGTTCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCa                                                                                                   >  2:477598/1‑150 (MQ=255)
                                       ttCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGccc                                                                                               >  1:70460/1‑150 (MQ=255)
                                        tCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCa                                                                                              <  1:125733/150‑1 (MQ=255)
                                           ccGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAgcg                                                                                           <  1:477598/150‑1 (MQ=255)
                                                  ggAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATg                                                                                                                                >  2:809751/1‑106 (MQ=255)
                                                  ggAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATg                                                                                                                                <  1:809751/106‑1 (MQ=255)
                                                   gagaTCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATggg                                                                                                                              <  2:308355/107‑1 (MQ=255)
                                                   gagaTCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATggg                                                                                                                              >  1:308355/1‑107 (MQ=255)
                                                   gagaTCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAAc                                                                                   >  2:440684/1‑150 (MQ=255)
                                                   gagaTCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAAc                                                                                   <  2:4624/150‑1 (MQ=255)
                                                    agaTCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAAcc                                                                                  >  1:94149/1‑150 (MQ=255)
                                                      aTCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCAc                                                                                <  1:440684/150‑1 (MQ=255)
                                                               gCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCa                                                                       <  2:625467/150‑1 (MQ=255)
                                                                  gTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACtg                                                                    <  1:234903/150‑1 (MQ=255)
                                                                    cATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACtggt                                                                  <  2:70460/150‑1 (MQ=255)
                                                                    cATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACtggt                                                                  <  1:297058/150‑1 (MQ=255)
                                                                    cATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACtggt                                                                  <  2:63721/150‑1 (MQ=255)
                                                                     aTCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACtggtg                                                                 <  2:149224/150‑1 (MQ=255)
                                                                       cGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCTTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGc                                                               <  1:813762/150‑1 (MQ=255)
                                                                          gCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGt                                                            <  1:86554/150‑1 (MQ=255)
                                                                            tGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTgg                                                          <  2:101270/150‑1 (MQ=255)
                                                                                 aaGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAgg                                                                                                                                              >  2:643725/1‑61 (MQ=255)
                                                                                 aaGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAgg                                                                                                                                              <  1:643725/61‑1 (MQ=255)
                                                                                         aGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGAACCAGCTGTTGCGCCATTTCAGCCCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGACCACGCCATCGc                                             >  1:316676/1‑150 (MQ=255)
                                                                                            ccGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGCCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTTGCCGTTGACCACCCCATCGcccc                                          >  2:131120/1‑149 (MQ=255)
                                                                                                 gccacggctgcgactcggcataggccgggtgcaccggggcgCGGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGACCACGCCATCGCCCGCGTGc                                     >  1:526794‑M2/42‑150 (MQ=255)
                                                                                                 ccacggctgcgactcggcataggccgggtgcaccggggcgcCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGGCAGCAACCACGAGCGCGCACTGGTGGCCGTGGACCACGCCATCGCCCGCGTGc                                     >  1:688438‑M2/42‑150 (MQ=255)
                                                                                                  cacggctgcgactcggcataggccgggtgcaccggggcgcCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTg                                                           >  2:53782‑M2/41‑127 (MQ=255)
                                                                                                  cacggctgcgactcggcataggccgggtgcaccggggcgcCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTg                                                           <  1:53782‑M2/87‑1 (MQ=255)
                                                                                                   ccGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGACCACGCCATCGCCCGCGTGCAg                                   <  2:485231/150‑1 (MQ=255)
                                                                                                            ccGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGCAGCCGTGGACCACGCCATCGCCCGCGTGCAGGCCACcgac                          >  1:649659/1‑150 (MQ=255)
                                                                                                              ggCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGACCACGCCATCGCCCGCGTGCAGGCCACcgacga                        >  2:598655/1‑150 (MQ=255)
                                                                                                                     gCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGACCACGCCATCGCCCGCGTGCAGGCCACCGACGAGCCATTc                 <  1:733751/150‑1 (MQ=255)
                                                                                                                         aGTCGCAGCCGGGGCGCAAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGACCACGCCATCGCCCGCGTGCAGGCCACCGACGAGCCATTCGccc             <  1:208794/150‑1 (MQ=255)
                                                                                                                           gttctaccggggtgcCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGa                                                         >  2:100198‑M2/16‑104 (MQ=255)
                                                                                                                           gttctaccggggtgcCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGa                                                         <  1:100198‑M2/89‑1 (MQ=255)
                                                                                                                                   gttgcgcCAGGCAATCCGTGACATGGGAAGTCAACGGACCGCGCTATTTCTACATCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGACCACGCCATCGCCCGCGTGCAGGCCACCGACGAGCCATTCGCCCGGCACTTCGa   <  2:649659‑M2/143‑1 (MQ=255)
                                                                                                                                   gTGGCGCCAGGCAATCCGTGTCATGGGCCGTGAGCTTACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGGGCGCGCACTGGTGGCCGTGGACCACGCCATCGCCCGCGTGCAGGCCACCGACGAGCCATTCGCCCGGCACTTCGa   >  1:708195/1‑150 (MQ=255)
                                                                                                                                    gggcgcCAGGCAATCCGTGTCATGGGCCGCGCGATCCGCCGGCGGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGACCACGCCATCGCCCGCCTGCAGGCCACCGACGAGCCATTCGCCCGGCACTTCGac  <  2:708195‑M2/144‑1 (MQ=255)
                                                                                                                                          |                                                                                                                                               
GGCAAGCCGCAGGTGCAGAGCCAGCTGATGGGCTGGATGTTCACCGTGCTGGAGATCGGCCACGCCGTCATCGAGCTGCGCAAGGAGCAAGCCCGCGCCCCGGTGCACCCGGCCTATGCCGAGTCGCAGCCGTGGCGCCAGGCAATCCGTGTCATGGGCCGTGCGCTGACCCGGCTGTTCCTGCAGCCCAGCGCCAGCAACCACGAGCGCGCACTGGTGGCCGTGGACCACGCCATCGCCCGCGTGCAGGCCACCGACGAGCCATTCGCCCGGCACTTCGAC  >  NC_002947/1447698‑1447979

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.