| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1838715 = | 40 (1.260) | 6 (0.200) | 5/230 | NT | 13.0% | coding (496/606 nt) | PP_1644 | NAD(P)H dehydrogenase |
| ? | NC_002947 | 1838752 = | 43 (1.460) | coding (459/606 nt) | PP_1644 | NAD(P)H dehydrogenase | |||||
TCCACCGCCAGCCTGCACGGCGGCCAGGAAACCACCCTGCTGTCGATGATGCTGCCGCTGATGCACCACGGCATGCTGGTGATGGGCCTGCCCTACAGCGAGTCGGCACTGCTCGAGACCCGTGGTGGCGGCACGCCTTATGGCGCCAGCCACCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1838871‑1838715‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaccacgGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCGGTGG > NC_002947/1838752‑1838870 TCCACCGCCAGTCTGCACGGCGGCCAGGAAACCACCCTGCTGTCGATGATGCTGCCGCTGATGCACCACGGCATGCTGGTGATGGGCCTGCCCTACAGCGAGTCGGCACTGCTCGAGACCCGTGGTGGCGGCACGCCTTATGGCGCCAGC > 2:830759/1‑150TCCACCGCCAGCCTGCACGGCGGCCAGGAAACCACCCTGCTGTCGATGATGCTGCCGCTGATGCACCACGGCATGCTGGTGATGGGCCTGCCCTACAGCGAGTCGGCACTGCTCGAGACCCGTGGTGGCGGCACGCCTTATGGCGCCAGC > 2:154763/1‑150 CGCCAGCCTGCACGGCGGCCAGGAAACCACCCTGCTGTCGATGATGCTGCCGCTGATGCACCACGGCATGCTGGTGATGGGCCTGCCCTACAGCGAGTCGGCACTGCTCGAGACCCGTGGTGGCGGCACGCCTTATGGCGCCAGCCACCA > 2:620832/1‑150 CCGTGGTGGCGGCACGCCTTATGGCGCCAGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTG > 1:231860/1‑150 CCGTGGTGGCGGCACGCCTTATGGCGCCAGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCAT > 1:280473/1‑77 CCGTGGTGGCGGCACGCCTTATGGCGCCAGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCAT < 2:280473/77‑1 CGTGGTGGCGGCACGCCTTATGGCGCCAGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTG > 1:680063/1‑133 CGTGGTGGCGGCACGCCTTATGGCGCCAGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTG < 2:680063/133‑1 GGCGGCACGCCTTATGGCGCCAGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCGGTGG < 2:231860/150‑1 TCCACCGCCAGCCTGCACGGCGGCCAGGAAACCACCCTGCTGTCGATGATGCTGCCGCTGATGCACCACGGCATGCTGGTGATGGGCCTGCCCTACAGCGAGTCGGCACTGCTCGAGACCCGTGGTGGCGGCACGCCTTATGGCGCCAGCCACCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1838871‑1838715‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaccacgGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCGGTGG > NC_002947/1838752‑1838870 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |