New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1838715 =	40 (1.260)	6 (0.200)	5/230	NT	13.0%	coding (496/606 nt)	PP_1644	NAD(P)H dehydrogenase
	?	NC_002947	1838752 =	43 (1.460)					coding (459/606 nt)	PP_1644	NAD(P)H dehydrogenase

TTCTAGCCACGCGCCGCCTCCAGGGCCTTGGCCGTGGTCGCCAGGCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCGGTGGAGGTGAACACGCCAG  >  NC_002947/1838603‑1838885                                                                                                                                                      |                                                                                                                                      ttCTAGCCACGCGCCGCCTCCAGGGCCTTGGCCGTGGTCGCCAGGCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACgg                                                                                                                                       <  1:798525/150‑1 (MQ=255) cagcctgcacggcggccaggaaaccaccctgctgtcgatgatgctgccgctgatgcaccacggcatgctggtgatgggcctgccctacagcgagtcggcactgctcgagaccCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACgg                                                                                                                                       >  1:231860‑M1/113‑150 (MQ=255)      gCCACGCGCCGCCTCCAGGGCCTTGGCCGTGGTCGCCAGGCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGtctc                                                                                                                                  >  1:620832/1‑150 (MQ=255)        cACGCGCCGCCTCCAGGGCCTTGGCCGTGGTCGCCAGGCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGa                                                                                                                                <  2:504654/150‑1 (MQ=255)         aCGCGCCGCCTCCAGGGCCTTGGCCGTGGTCGCCAGGCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGTTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAg                                                                                                                               >  1:655559/1‑150 (MQ=255)              ccgccTCCAGGGCCTTGGCCGTGGTCGCCAGGCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTg                                                                                                                          <  1:194451/150‑1 (MQ=255)                   tCCAGGGCCTTGGCCGTGGTCGCCAGGCGTTGGCCCAGGGCGCGGCACAGGGCGAGTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGAc                                                                                                                     >  2:372021/1‑150 (MQ=255)                    ccAGGGCCTTGGCCGTGGTCGCCAGGCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACt                                                                                                                    <  1:382286/150‑1 (MQ=255)                      cgggCCTTGGCCGTGGTCGCCAGGCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCg                                                                                                                  >  2:301558/2‑150 (MQ=255)                         gCCTTGGCCGTGGTCGCCAGGCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTg                                                                                                               <  1:311601/150‑1 (MQ=255)                           cTTGGCCGTGGTCGCCAGGCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTa                                                                                                             <  2:138655/150‑1 (MQ=255)                                ccGTGGTCGCCAGGCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCa                                                                                                        <  1:354715/150‑1 (MQ=255)                                  gTGGTCGCCAGGCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTTGTGGCTGGCGCCATAAGTCGTTCCGCCACCACGGGTGTCGAGCAGTGCCGACTCGCTGTAGGGCAgg                                                                                                      <  2:298273/150‑1 (MQ=255)                                   tGGTCGCCAGGCGTTGGCCCAGGGCGCGGTACAGGGCGATTTCGTATGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGc                                                                                                     <  2:111815/150‑1 (MQ=255)                                        gCCAGGCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTCGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATc                                                                                                <  1:593567/150‑1 (MQ=255)                                             gCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGATGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAg                                                                                           >  2:286109/1‑150 (MQ=255)                                                    cccAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAg                                                                                                            >  2:728949/1‑126 (MQ=255)                                                    cccAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAg                                                                                                            <  1:728949/126‑1 (MQ=255)                                                     ccAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAg                                                                                                            >  1:781773/1‑125 (MQ=255)                                                     ccAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAg                                                                                                            <  2:781773/125‑1 (MQ=255)                                                        gggCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGACTGCGTGGCGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCgtggt                                                                                <  1:356670/150‑1 (MQ=255)                                                         ggCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCgtggtg                                                                               <  2:307549/150‑1 (MQ=255)                                                           cgcgGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCa                                                                             >  2:496680/1‑150 (MQ=255)                                                                cacaGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGc                                                                        >  2:331364/1‑150 (MQ=255)                                                                cacaGGGCGATTTCGTGTGGGTCGAGTTCGAGCTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAAGCCCATCACCAGCATGCCGTGGTGCATCAGc                                                                        <  1:220914/150‑1 (MQ=255)                                                                  caGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCgg                                                                      <  2:433845/150‑1 (MQ=255)                                                                   aGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGgc                                                                     >  1:154763/1‑150 (MQ=255)                                                                     ggCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGgcag                                                                   >  1:124771/1‑150 (MQ=255)                                                                     cgCGATTTCGAGTGGGTCGAGTTCGCGCTTGCCATCGGCGCATGCGTGCTGGCTGGCGCCCTAAGGCGTGCAGCCAACACGGGACTCGAGCAGTGCCGACTCGCTGTAAGCCAGGCCCATAGGGAGAGTGTGGTGGTGCCTGAGCGgcag                                                                   >  2:7369/2‑150 (MQ=255)                                                                          atgggcctgccctacagcgagtcggcactgctcgagaccCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACgg                                                                                                                                       <  2:280473‑M1/38‑1 (MQ=255)                                                                          atgggcctgccctacagcgagtcggcactgctcgagaccCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACgg                                                                                                                                       >  1:280473‑M1/40‑77 (MQ=255)                                                                           ttCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTTCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGcatcat                                                             <  1:728769/150‑1 (MQ=255)                                                                                   ggTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGAcagca                                                     <  1:496680/150‑1 (MQ=255)                                                                                     tCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAgg                                                   <  1:301558/150‑1 (MQ=255)                                                                                         gTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGggtgg                                               >  2:520971/1‑150 (MQ=255)                                                                                          ttCGCGCTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGAACCACTTGAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGggtggt                                              >  1:52998/1‑150 (MQ=255)                                                                                             gcgcTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGAAGGGTTGTTTc                                           >  1:571378/1‑150 (MQ=255)                                                                                               gcTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCt                                         <  2:124771/150‑1 (MQ=255)                                                                                                            gcCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAg                            <  1:331364/150‑1 (MQ=255)                                                                                                            gcCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAg                            <  2:628262/150‑1 (MQ=255)                                                                                                                ccgtggtggcggcacgccttatggcgccagccaccacgGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCAt                                                                                                 <  2:280473‑M2/39‑1 (MQ=255)                                                                                                                ccgtggtggcggcacgccttatggcgccagccaccacgGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCAt                                                                                                 >  1:280473‑M2/39‑77 (MQ=255)                                                                                                                ccgtggtggcggcacgccttatggcgccagccaccacgGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTg                        >  1:231860‑M2/39‑150 (MQ=255)                                                                                                                 cgtggtggcggcacgccttatggcgccagccaccacgGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTg                                        >  1:680063‑M2/38‑133 (MQ=255)                                                                                                                 cgtggtggcggcacgccttatggcgccagccaccacgGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTg                                        <  2:680063‑M2/96‑1 (MQ=255)                                                                                                                   TGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCg                     >  2:620832‑M1/1‑150 (MQ=255)                                                                                                                       ggcggcacgccttatggcgccagccaccacgGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCGGTgg                 <  2:231860‑M2/119‑1 (MQ=255)                                                                                                                        GCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCGGTGGa                >  2:154763‑M1/1‑150 (MQ=255)                                                                                                                        GCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGACTGGCGGTGGa                >  2:830759‑M1/1‑150 (MQ=255)                                                                                                                          tggcGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCgtggt                                                                                <  1:744191/84‑1 (MQ=255)                                                                                                                          tggcGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCgtggt                                                                                >  2:744191/1‑84 (MQ=255)                                                                                                                           ggcGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCGGTGGAGGt             <  2:370243/150‑1 (MQ=255)                                                                                                                            gcgcCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCGGTGGAGGTg            >  2:70085/1‑150 (MQ=255)                                                                                                                                cATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCAt                                                                                                 >  1:338583/1‑61 (MQ=255)                                                                                                                                cATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCAt                                                                                                 <  2:338583/61‑1 (MQ=255)                                                                                                                                      gCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCGGTGGAGGTGAACACGCCAg  >  2:571872/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                      TTCTAGCCACGCGCCGCCTCCAGGGCCTTGGCCGTGGTCGCCAGGCGTTGGCCCAGGGCGCGGCACAGGGCGATTTCGTGTGGGTCGAGTTCGCGCTTGCCATCGGCGCCTGCGTGGTGGCTGGCGCCATAAGGCGTGCCGCCACCACGGGTCTCGAGCAGTGCCGACTCGCTGTAGGGCAGGCCCATCACCAGCATGCCGTGGTGCATCAGCGGCAGCATCATCGACAGCAGGGTGGTTTCCTGGCCGCCGTGCAGGCTGGCGGTGGAGGTGAACACGCCAG  >  NC_002947/1838603‑1838885

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.