New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2047300 | 26 (0.820) | 4 (0.130) | 4/238 | NT | 14.8% | coding (764/1197 nt) | PP_1820 | benzoate transport protein |
? | NC_002947 | = 2047339 | 21 (0.690) | coding (725/1197 nt) | PP_1820 | benzoate transport protein |
GCACCACACCGCCGCGGTGTAGCGTTTGGCCGGGTCTTCATGGGCATGCGGCCCGGTGCAGATCGCCGCGCTGATCGCCGCCAGGTTGACCCCATGCGAGCCGAACGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2047149‑2047300 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgTGGCCGTCCTGCGTGCCGACGGCTACCAGGTACCGGCCTCGCCGCTGA < NC_002947/2047339‑2047292 GCACCACACCGCCGCGGTGTAGCGTTTGGCCGGGTCTTCATGGGCATGCGGCCCGGTGCAGATCGCCGCGCTGATCGCCGCCAGGTTGACCCCATGCGGGATTTGCGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGG > 1:269930/1‑150 CGCCAGGTTGACCCCATGCGAGCCGAACGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGGCGTGGCCGTCCTGCGTGCCGACGGCTACCAGGTACCGGC < 1:151193/111‑1 CGCCAGGTTGACCCCATGCGAGCCGAACGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGGCGTGGCCGTCCTGCGTGCCGACGGCTACCAGGTACCGGC > 2:151193/1‑111 CCCATGCGAGCCGAACGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGGCGTGGCCGTCCTGCGTGCCGACGGCTACCAGGTACCGGCCTCGCCGCTGA < 1:291060/110‑1 CCCATGCGAGCCGAACGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGGCGTGGCCGTCCTGCGTGCCGACGGCTACCAGGTACCGGCCTCGCCGCTGA > 2:291060/1‑110 GCACCACACCGCCGCGGTGTAGCGTTTGGCCGGGTCTTCATGGGCATGCGGCCCGGTGCAGATCGCCGCGCTGATCGCCGCCAGGTTGACCCCATGCGAGCCGAACGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2047149‑2047300 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgTGGCCGTCCTGCGTGCCGACGGCTACCAGGTACCGGCCTCGCCGCTGA < NC_002947/2047339‑2047292 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |