New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2047300 | 26 (0.820) | 4 (0.130) | 4/238 | NT | 14.8% | coding (764/1197 nt) | PP_1820 | benzoate transport protein |
? | NC_002947 | = 2047339 | 21 (0.690) | coding (725/1197 nt) | PP_1820 | benzoate transport protein |
CACCGCCGCGGTGTAGCGTTTGGCCGGGTCTTCATGGGCATGCGGCCCGGTGCAGATCGCCGCGCTGATCGCCGCCAGGTTGACCCCATGCGAGCCGAACGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGGCGAGGCCGGTACCTGGTAGCCGTCGGCACGCAGGACGGCCACGCCGGGCATGTTCTGCGAGGTCATGGCCACCACGAACAGCGGAATGCCGATGCTGATGGTTGCCGCCAGCGAGAAGCTTGGGGTGGTCCACACCGG > NC_002947/2047155‑2047436 | cacCGCCGCGGTGTAGCGTTTGGCCGGGTCTTCATGGGCATGCGGCCCGGTGCAGATCGCCGCGCTGATCGCCGCCAGGTTGACCCCATGCGAGCCGAACGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGGCGAGGc < 1:783943/150‑1 (MQ=255) cccgccgCGGTGTAGCGTTTGGCCGGGTCTTCATGGGCATGCGGCCCGGTGCAGATCGCCGCGCTGATCGCCGCCAGGTTGACCCCATGCGAGCCGAACGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGGCGAGGcc < 2:208545/149‑1 (MQ=255) gccgcGGTGTAGCGTTTGGCCGGGTCTTCATGGGCATGCGGCCCGGTGCAGATCGCCGCGCTGATCGCCGCCAGGTTGACCCCATGCGAGCCGAACGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGGCGAGGCCGGt < 1:582865/150‑1 (MQ=255) gtAGCGTTTGGCCGGGTCTTCATGGGCATGCGGCCCGGTGCAGATCGCCGCGCTGATCGCCGCCAGGTTGACCCCATGCGAGCCGAACGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGGCGAGGCCGGTACCTGGTa < 1:214997/150‑1 (MQ=255) gCGTTTGGCCGGGTCTTCATGGGCATGCGGCCCGGTGCAGATCGCCGCGCTGATCGCCGCCAGGTTGACCCCATGCGAGCCGAACGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGGCGAGGCCGGTACCTGGTAGcc < 1:118562/150‑1 (MQ=255) ttGGCCGGGTCTTCATGGGCATGCGGCCCGGTGCAGATCGCCGCGCTGATCGCCGCCAGGTTGACCCCATGCGAGCCGAACGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGGCGAGGCCGGTACCTGGTAGCCGTCg < 2:116256/150‑1 (MQ=255) gCGGCCCGGTGCAGATCGCCGCGCTGCTCGCCGCCAGGTTGACCCCATGCGAGCCGAACGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGGCGAGGCCGGTACCTGGTAGCCGTCGGCACGCAGGACGGCCACGCCgg < 2:566421/150‑1 (MQ=255) gCGGCCCGGTGCACATCGCCGCGCTGATCGCCGCCAGGTTGACCCCATGCGAGCCGAACGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGGCGAGGCCGGTACCTGGTAGCCGTCGGCACGCAGGACGGCCACGCCgg < 1:458758/150‑1 (MQ=255) gCCCGGTGCAGATCGCCGCGCTGATCGCCGCCAGGTTGACCCCATGCGAGCCGAACGGCGCCAGCAGCAGCGAGGAAAAGCCGGTGGCCGAAATCAGCGGCGAGGCCGGTACCTGGTAGCCGTCGGCACGCAGGACGGCCACGCCGGGCa > 2:298028/1‑150 (MQ=255) aTCGCCGCGCTGATCGCCGCCAGGTTGGCCGCATGCGAGCCGAACGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCTGCGGCGAGGCCGGTACCTGGTAGCCGTCGGCACGCAGGACGGCCACGCCGGGCATGTTCTGCGAg < 1:781862/150‑1 (MQ=255) aTCGCCGCGCTGATCGCCGCCAGGTTGACCCCATGCGAGCCGAACGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGGCGAGGCCGGTACCTGGTAGCCGTCGGCACGCAGGACGGCCACGCCGGGCATGTTCTGCGAg < 2:99242/150‑1 (MQ=255) aTCGCCGCGCTGATCGCCGCCAGGTTGACCCCATGCGAGCCGAACGGCGCCAGCAGCAGCGAGGAAAAGCCGGTGGCCGAAATCAGCGGCGAGGCCGGTACCTGGTAGCCGTCGGCACGCAGGACGGCCACGCCGGGCATGTTCTGCGAg < 1:298028/150‑1 (MQ=255) cgccAGGTTGACCCCATGCGAGCCGAACGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGGCGtggccgtcctgcgtgccgacggctaccaggtaccggc < 1:151193‑M1/111‑38 (MQ=255) cgccAGGTTGACCCCATGCGAGCCGAACGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGGCGtggccgtcctgcgtgccgacggctaccaggtaccggc > 2:151193‑M1/1‑74 (MQ=255) cgccAGGTTGACCCCATGCGAGCCGAACGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGGCGAGGCCGGTACCTGGTAGCCGTCGGCACGCAGGACGGCCACGCCGGGCATGTTCTGCGAGGTCATGGCCACCACGaa > 2:117179/1‑150 (MQ=255) ccAGGTTGACCCCATGCGAGCCGAACGGCGCCAGCAGCAGCGAGGCANAGCCGGTGGCCGAAATCAGCGGCGAGGCCGGTACCTGGTAGCCGTCGGCACGCAGGACGGCCACGCCGGGCATGTTCTGCGAGGTCATAGCCACCACTAACa > 1:386151/1‑150 (MQ=255) ccAGGTTGACCCCATGCGAGCCGAACGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGGCGAGGCCGGTACCTGGTAGCCGTCGGCACGCAGGACGGCCACGCCGGGCATGTTCTGCGAGGTCATGGCCACCACGAACa > 2:182572/1‑150 (MQ=255) ttGACCCCATGCGAGCCGAACGGCGCCAGCACCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGGCGAGGCCGGTACCTGCTAGCCGTCGGCACGCAGGACGGCCACGCCGGGCATGTTCTGCGAGGTCATGGCCACCACGAACAGCGGa < 2:797505/150‑1 (MQ=255) ccccATGCGAGCCGAAGGGCGCCACAAGCAGCGAGGCAAAGCCGGTAGCCGAAATCAGCGGCGAGGCCGGTACCTGGTAGCCGTCGGCACGCAGAACCCCTTAGACGGACATGTTCTGCAACGTCATGGCCACCACGAACAGCCGAATGc < 2:335916/150‑1 (MQ=255) ccccATGCGAGCCGAACGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGGCGAGGCCGGTACCTGGTAGCCGTCGGCACGCAGGACGGCCACGCCGGGCATGTTCTGCGAGGTCATGGCCACCACGAACAGCGGAATGc > 1:483161/1‑150 (MQ=255) cccATGCGAGCCGAACGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGGCGtggccgtcctgcgtgccgacggctaccaggtaccggcctcgccgctga < 1:291060‑M1/110‑49 (MQ=255) cccATGCGAGCCGAACGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGGCGtggccgtcctgcgtgccgacggctaccaggtaccggcctcgccgctga > 2:291060‑M1/1‑62 (MQ=255) aTGCGAGCCGAACGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGGCGAGGCCGGTACCTGGTAGCCGTCGGCACGCAGGACGGCCACGCCGGGCATGTTCTGCGAGGTCATGGCCACCACGAACAGCGGAATGCCGAt < 2:846215/150‑1 (MQ=255) tGCGAGCCGAACGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGGCGAGGCCGGTACCTGGTAGCCGTCGGCACGCAGGACGGCCACGCCGGGCATGTTCTGCGAGGTCATGGCCACCACGAACAGCGGAATGCCGATg < 1:182572/150‑1 (MQ=255) gCCGAACGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGGCGAGGCCGGTACCTGGTAGCCGTCGGCACGCAGGACGGCCACGCCGGGCATGTTCTGCGAGGTCATGGCCACCACGAACAGCGGAATGCCGATGCTGAt > 1:214704/1‑150 (MQ=255) gCCGAACGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGGCGAGGCCGGTACCTGGTAGCCGTCGGCACGCAGGACGGCCACGCCGGGCATGTTCTGAGAGGTCATGGCCACCACGAACAGCGGAATGCCGATGCTGAt < 2:269930/150‑1 (MQ=255) aaCGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGGCGAGGCCGGTACCTGGTAGCCGTCGGCACGCAGGACGGCCACGCCGGGCATGTTCTGCGAGGTCATGGCCACCACGAACAGCGGAATGCCGATGCTGATGGtt < 2:214704/150‑1 (MQ=255) aCGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGGCGAGGCCGGTACCTGGTAGCCGTCGGCACGCAGGACGGCCACGCCgg < 2:185971/93‑1 (MQ=255) aCGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGGCGAGGCCGGTACCTGGTAGCCGTCGGCACGCAGGACGGCCACGCCgg > 1:185971/1‑93 (MQ=255) gCAAAGCCGGTGGCCGAAATCAGCGGCGAGGCCGGTACCTGGTAGCCGTCGGCACGAATTACGGCCACGCCGGGCATGTTCTGCGAGGTCATGGCCACCACGAACAGCGGAATGCCGATGCTGATGGTTGCCGCCAGCGAGAAGCTTggg < 1:438637/150‑1 (MQ=255) cAAAGCCGGTGGCCGAAATCAGCGGCGAGGCCGGTACCTGGTAGCCGTCGGCACGCAGGACGGCCACGCCGGGCATGTTCTGCGAGGTCATGGCCACCACGAACAGCGGAATGCCGATGCTGATGGTTGCCGCCAGCGAGAAGCTTgggg < 1:350036/150‑1 (MQ=255) cGAAATCAGCGGCGAGGCCGGTACCTGGTAGCCGTCGGCACGCAGGACGGCCACGCCGGGCATGTTCTGCGAGGTCATGGCCACCACGAACAGCGGAATGCCGATGCTGATGGTTGCCGCCAGCGAGAAGCTTGGGGTGGTCCACACCgg > 1:555994/1‑150 (MQ=255) tCAGCGGCGAGGCCGGTACCTGGTAGCCGTCGGCACGCAGGACGGCCAcgccgctgatttcggccaccggctttgcctcgctgctgctggcgccgttcggctcgcatggg > 2:291060‑M2/1‑48 (MQ=255) tCAGCGGCGAGGCCGGTACCTGGTAGCCGTCGGCACGCAGGACGGCCAcgccgctgatttcggccaccggctttgcctcgctgctgctggcgccgttcggctcgcatggg < 1:291060‑M2/110‑63 (MQ=255) | CACCGCCGCGGTGTAGCGTTTGGCCGGGTCTTCATGGGCATGCGGCCCGGTGCAGATCGCCGCGCTGATCGCCGCCAGGTTGACCCCATGCGAGCCGAACGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGGCGAGGCCGGTACCTGGTAGCCGTCGGCACGCAGGACGGCCACGCCGGGCATGTTCTGCGAGGTCATGGCCACCACGAACAGCGGAATGCCGATGCTGATGGTTGCCGCCAGCGAGAAGCTTGGGGTGGTCCACACCGG > NC_002947/2047155‑2047436 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |