| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2295816 | 52 (1.640) | 5 (0.160) | 5/238 | NT | 10.4% | intergenic (+19/+114) | PP_5496/PP_2023 | hypothetical protein/glutathione S‑transferase family protein |
| ? | NC_002947 | = 2295903 | 36 (1.180) | intergenic (+106/+27) | PP_5496/PP_2023 | hypothetical protein/glutathione S‑transferase family protein | |||||
CCGCATCGGTCGTACTGCCAGCGCATGCCCATGCCGACAGCAGCAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2295664‑2295816‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtccGTGTGGGAGCGGGCATGCCCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAAGGACCTCACACAAGCCAGATCAGTGGTGGTGCTTGCCACTCAGGGCCGCATGGAAATTGGCG < NC_002947/2295903‑2295755 CCGCATCGGTCGTACTGCCAGCGCATGCCCATGCCGACAGCAGCAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGTCTTGTGTGAGG < 2:211237/150‑1CCGCATCGGTCGTACTGCCAGCGCATGCCCATGCCGACAGCAGCAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGG > 1:703802/1‑150 ACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGGGGTCCGTGTGGGAGCGGGCATGCCCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGGCATGC < 1:714861/150‑1 GCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCGTGTGGGAGCGGGCATGCCCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCG < 1:421036/137‑1 GCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCGTGTGGGAGCGGGCATGCCCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCG > 2:421036/1‑137 TGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCGTGTGGGAGCGGGCATGCCCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGGCAT > 1:181215/1‑123 TGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCGTGTGGGAGCGGGCATGCCCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGGCAT < 2:181215/123‑1 GTCCGTGTGGGAGCGGGCATGCCCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAAGGACCTCACACAAGCCAGATCAGTGGTGGTGCTTGCCACTCAGGGCCGCATGGAAATTG > 2:703802/1‑150 TCCGTGTGGGAGCGGGCATGCCCGCGAAGCTGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAAGGACCTCACACAAGCCAGATCAGTGGTGGTGCTTGCCACTCAGGGCCGCATGGAAATTGG > 2:828784/1‑150 TCCGTGTGGGAGCGGGCATGCCCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAAGGACCTCACACAAGCCAGATCAGTGGTGGTGCTTGCCACTCAGGGCCGCATGGAAATTGG > 1:534102/1‑150 TCCGTGTGGGAGCGGGCATGCCCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAAGGACCTCACACAAGCCAGATCAGTGGTGGTGCTTGCCACTCAGGGCCGCATGGAAATTGG > 2:537719/1‑150 CGTGTGGGAGCGGGCATGCCCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAAGGACCTCACACAAGCCAGATCAGTGGTGGTGCTTGCCACTCAGGGCCGCATGGAAATTGGCG < 1:712713/150‑1 CCGCATCGGTCGTACTGCCAGCGCATGCCCATGCCGACAGCAGCAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2295664‑2295816‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtccGTGTGGGAGCGGGCATGCCCGCGAAGCGGGCACCGCGGTGGATGGCACCGGCTCTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAAGGACCTCACACAAGCCAGATCAGTGGTGGTGCTTGCCACTCAGGGCCGCATGGAAATTGGCG < NC_002947/2295903‑2295755 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |