| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2297219 | 23 (0.730) | 4 (0.140) | 4/230 | NT | 14.7% | coding (2946/3645 nt) | sbcC | exonuclease subunit SbcC |
| ? | NC_002947 | = 2297232 | 25 (0.850) | coding (2933/3645 nt) | sbcC | exonuclease subunit SbcC | |||||
CCTGCTGGCGGCGCTGGTCGTCGGCCTGTTGTGCACGCAATTCGGCGCATTGCTGCTCGTGGTTTGCCAGGCGTTCGCGCAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2297068‑2297219‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgcaggAGCGCGAACAGCGCCTGCAGCATCACGCGGCACAGATGACCGTGGACACCACGGTCCAAGCCCTGGAGCAAGCCTTGGCCGAACTGCGCGAACGCCTGGCAAAC < NC_002947/2297232‑2297129 catgagGGCGGCGCTGGTCGTCGGCCTGTTGTGCACGCAATTCGGCGCATTGCTGCGCGTGGTTTGCCAGGCGTTCGCGCAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCA > 2:672493/7‑150CCTGCTGGCGGCGCTGGTCGTCGGCCTGTTGTGCACGCAATTCGGCGCATTGCTGCTCGTGGTTTGCCAGGCGTTCGCGCAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCA < 1:365258/150‑1 CCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGAGCGCGAACAGCGCCTGCAG > 1:184570/1‑73 CCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGAGCGCGAACAGCGCCTGCAG < 2:184570/73‑1 TGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGAGCGCGAACAGCGCCTGCA > 1:821439/1‑54 TGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGAGCGCGAACAGCGCCTGCA < 2:821439/54‑1 GCTGCAGGAGCGCGAACAGCGCCTGCAGCATCACGCGGCACAGATGACCGTGGACACCACGGTCCAAGCCCTGGAGCAAGCCTTGGCCGAACTGC > 1:483036/1‑95 GCTGCAGGAGCGCGAACAGCGCCTGCAGCATCACGCGGCACAGATGACCGTGGACACCACGGTCCAAGCCCTGGAGCAAGCCTTGGCCGAACTGC < 2:483036/95‑1 CAGGAGCGCGAACAGCGCCTGCAGCATCACGCGGCACAGATGACCGTGGACACCACGGTCCAAGCCCTGGAGCAAGCCTTGGCCGAACTGCGCGAACGCCTGGCAAAC < 1:300748/108‑1 CAGGAGCGCGAACAGCGCCTGCAGCATCACGCGGCACAGATGACCGTGGACACCACGGTCCAAGCCCTGGAGCAAGCCTTGGCCGAACTGCGCGAACGCCTGGCAAAC > 2:300748/1‑108 CCTGCTGGCGGCGCTGGTCGTCGGCCTGTTGTGCACGCAATTCGGCGCATTGCTGCTCGTGGTTTGCCAGGCGTTCGCGCAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2297068‑2297219‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgcaggAGCGCGAACAGCGCCTGCAGCATCACGCGGCACAGATGACCGTGGACACCACGGTCCAAGCCCTGGAGCAAGCCTTGGCCGAACTGCGCGAACGCCTGGCAAAC < NC_002947/2297232‑2297129 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |