New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2297219	23 (0.730)	4 (0.140)	4/230	NT	14.7%	coding (2946/3645 nt)	sbcC	exonuclease subunit SbcC
	?	NC_002947	= 2297232	25 (0.850)					coding (2933/3645 nt)	sbcC	exonuclease subunit SbcC

CACGCAATTCGGCGCATTGCTGCTCGTGGTTTGCCAGGCGTTCGCGCAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCCGGCATCGTCCAGTTCCGGATGCTCGCTGCG  >  NC_002947/2297101‑2297368                                                                                                                                    |                                                                                                                                         cACGCAATTCGGCGCATTGCTGCTCGTGGTTTGCCAGGCGTTCGCGCAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGc                                                                                                                        >  1:108767/1‑150 (MQ=255)  aCGCAATTCGGCGCATTGCTGCTCGGGGTTTGCCAGGCGTTCGCGCAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCAGCGGTCATCTGTGCCGCGTGATGCTGCCGGCGGTGTTCGCGCTCCTGCAGCAGGAAGCggat                                                                                                                       <  2:40448/150‑3 (MQ=255)    gCAATTCGGCGCATTGCTGCTCGTGGTTTGCCAGGCGTTCGCGCAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGCTCGGGCTCCTGCAGCCGGACGCGGCCCt                                                                                                                     >  1:180071/1‑150 (MQ=255)            gcgcATTGCTGCTCGTGGTTTGCCAGGCGTTCGCGCAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATg                                                                                                             >  2:701701/1‑150 (MQ=255)                 ttGCTGCTCGTGGTTTGCCAGGCGTTCGCGCAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCttt                                                                                                        <  2:419682/150‑1 (MQ=255)                    ctgctCGTGGTTTGCCAGGCGTTCGCGCAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTc                                                                                                     >  2:629460/1‑150 (MQ=255)                        tCGTGGTTTGCCAGGCGTTCGCGCAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCcgcg                                                                                                 >  2:419087/1‑150 (MQ=255)                            ggTTTGCCAGGCGTTCGCGCAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCtt                                                                                             <  2:694391/150‑1 (MQ=255)                            ggTTTGCCAGGCGTTCGCGCAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCtt                                                                                             <  1:419087/150‑1 (MQ=255)                             gTTTGCCAGGCGTTCGCGCAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTcctg                                                                                                                                      <  1:300748‑M2/108‑5 (MQ=255)                             gTTTGCCAGGCGTTCGCGCAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTcctg                                                                                                                                      >  2:300748‑M2/1‑104 (MQ=255)                                      gCGTTCGCGCAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTg                                                                                   <  1:672493/150‑1 (MQ=255)                                              gcAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTcctgcagc                                                                                                                                  >  1:483036‑M2/1‑87 (MQ=255)                                              gcAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTcctgcagc                                                                                                                                  <  2:483036‑M2/95‑9 (MQ=255)                                              gcAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAAtt                                                                           <  1:701701/150‑1 (MQ=255)                                                  ttCGTCCAAGTCATGCTCAAAGGCATGGCCAGTGGTGTCAACGGGCATCTGTGCCGCGTGATGCTGCAGGCGCTGTGCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCAtt                                                                       <  2:141543/150‑1 (MQ=255)                                                                 cTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATc                                                        <  1:138073/150‑1 (MQ=255)                                                                   ccAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGa                                                                     <  1:514063/135‑1 (MQ=255)                                                                   ccAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGa                                                                     >  2:514063/1‑135 (MQ=255)                                                                     aGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATg                                                    >  2:99588/1‑150 (MQ=255)                                                                         cTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCca                                                >  1:150885/1‑150 (MQ=255)                                                                            ggACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCcagca                                             >  1:130426/1‑150 (MQ=255)                                                                                    gtgtCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCg                                     >  1:496816/1‑150 (MQ=255)                                                                                            ggTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCCGGc                             >  1:588930/1‑150 (MQ=255)                                                                                                      gCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCCGGCATCGTCCAGt                   <  2:549164/150‑1 (MQ=255)                                                                                                               tgctgcAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCCGGCATCGTCCAGTTCCGGATGc          >  1:611247/1‑150 (MQ=255)                                                                                                                 ctgcAGGCGCTGTTCGCGCTcctgcagcatcacgcggcacagatgaccgtggacaccacggtccaagccctgg                                                                                     <  2:184570‑M2/73‑54 (MQ=255)                                                                                                                 ctgcAGGCGCTGTTCGCGCTcctgcagcatcacgcggcacagatgaccgtggacaccacggtccaagccctgg                                                                                     >  1:184570‑M2/1‑20 (MQ=255)                                                                                                                  tgcAGGCGCTGTTCGCGCTcctgcagcatcacgcggcacagatgaccgtggaca                                                                                                       >  1:821439‑M2/1‑19 (MQ=255)                                                                                                                  tgcAGGCGCTGTTCGCGCTcctgcagcatcacgcggcacagatgaccgtggaca                                                                                                       <  2:821439‑M2/54‑36 (MQ=255)                                                                                                                  tgcAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCCGGCATCGTCCAGTTCCGGATGCTCg       <  2:496816/150‑1 (MQ=255)                                                                                                                   gcAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCCGGCATCGTCCAGTTCCGGATGCTCGc      <  1:629460/150‑1 (MQ=255)                                                                                                                       gcgcTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCCGGCATCGTCCAGTTCCGGTTGCTCGCTgcg  >  1:846420/1‑150 (MQ=255)                                                                                                                                  gcTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCCGGCAtgg                         <  1:848253/116‑3 (MQ=255)                                                                                                                                  gcTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCCGGCAtgg                         >  2:848253/1‑114 (MQ=255)                                                                                                                                    |                                                                                                                                         CACGCAATTCGGCGCATTGCTGCTCGTGGTTTGCCAGGCGTTCGCGCAGTTCGGCCAAGGCTTGCTCCAGGGCTTGGACCGTGGTGTCCACGGTCATCTGTGCCGCGTGATGCTGCAGGCGCTGTTCGCGCTCCTGCAGCAGGACGCGGCCCTGCTCGATGGCTTTTTCCGCGCCTTGCAAACGCTGGCGCAATTCATTGACTTGCGCGTCATCCATGGCCAGCAGGCGATCGAGGCCGGCATCGTCCAGTTCCGGATGCTCGCTGCG  >  NC_002947/2297101‑2297368

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.