New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2651871	36 (1.140)	4 (0.130)	4/240	NT	11.6%	coding (590/1113 nt)	aroF‑I	tyr‑sensitive phospho‑2‑dehydro‑3‑deoxyheptonate aldolase
	?	NC_002947	= 2651909	26 (0.850)					coding (552/1113 nt)	aroF‑I	tyr‑sensitive phospho‑2‑dehydro‑3‑deoxyheptonate aldolase

GCAGTACCACGTGGCCGTATGGGTTGCCCTTGGTGGTGACGATCGACACGCCGCCTTCCTGGTTGATGCCCAGGAAGCGGTGCGGCTTGGACACCGACTGCAGGGCATTGATGGCAACGGTCAGGCCGCCATCGGTACCGTTCTTGAAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2651722‑2651871 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaacACACCGCGAGATGGCCTCGGGCCTGTCCTCGGCGGTGGGTTTCAAGAACGGTACCGATGGCGGCCTGACCGTTGCCATCAATGCCCTGCAGTCGGTGTCCAAGCCGCACCGCTTCCTGGGCATCAACCAGGAAGGCGGCGTGTCGA  <  NC_002947/2651909‑2651764                                                                                                                                                                                                                                                                                                          GCAGTACCACGTGGCCGTATGGGTTGCCCTTGGTGGTGACGATCGACACGCCGCCTTCCTGGTTGATGCCCAGGAAGCGGTGCGGCTTGGACACCGACTGCAGGGCATTGATGGCAACGGTCAGGCCGCCATCGGTACCGTTCTTGAAAC                                                                                                                                                    >  2:171296/1‑150                  TATGGGTTGCCCTTGGTGGTGACGATCGACACGCCGCCTTCCTGGTTGATGCCCAGGAAGCGGTGCGGCTTGGACACCGACTGCAGGGCATTGATGGCAACGGTCAGGCCGCCATCGGTACCGTTCTTGAAA                                                                                                                                                     >  1:713232/1‑132                  TATGGGTTGCCCTTGGTGGTGACGATCGACACGCCGCCTTCCTGGTTGATGCCCAGGAAGCGGTGCGGCTTGGACACCGACTGCAGGGCATTGATGGCAACGGTCAGGCCGCCATCGGTACCGTTCTTGAAA                                                                                                                                                     <  2:713232/132‑1                             CTTGGTGGTGACGATCGACACGCCGCCTTCCTGGTTGATGCCCAGGAAGCGGTGCGGCTTGGACACCGACTGCAGGGCATTGATGGCAACGGTCAGGCCGCCATCGGTACCGTTCTTGAAA                                                                                                                                                     >  1:26521/1‑121                             CTTGGTGGTGACGATCGACACGCCGCCTTCCTGGTTGATGCCCAGGAAGCGGTGCGGCTTGGACACCGACTGCAGGGCATTGATGGCAACGGTCAGGCCGCCATCGGTACCGTTCTTGAAA                                                                                                                                                     <  2:26521/121‑1                                                     GCCTTCCTGGTTGATGCCCAGGAAGCGGTGCGGCTTGGACACCGACTGCAGGGCATTGATGGCAACGGTCAGGCCGCCATCGGTACCGTTCTTGAAACACACCGCGAGATGGCCTCGGGCCTGTCCTCGGCGGTGGGTTT                                                                                                          >  1:580499/1‑140                                                     GCCTTCCTGGTTGATGCCCAGGAAGCGGTGCGGCTTGGACACCGACTGCAGGGCATTGATGGCAACGGTCAGGCCGCCATCGGTACCGTTCTTGAAACACACCGCGAGATGGCCTCGGGCCTGTCCTCGGCGGTGGGTTT                                                                                                          <  2:580499/140‑1                                                         TCCTGGTTGATGCCCAGGAAGCGGTGCGGCTTGGACACCGACTGCAGGGCATTGATGGCAACGGTCAGGCCGCCATCGGTACCGTTCTTGAAACACACCGCGAGATGGCCTCGGGCCTGTCCTCGGCGGTGGGTTTCA                                                                                                        >  1:343749/1‑138                                                         TCCTGGTTGATGCCCAGGAAGCGGTGCGGCTTGGACACCGACTGCAGGGCATTGATGGCAACGGTCAGGCCGCCATCGGTACCGTTCTTGAAACACACCGCGAGATGGCCTCGGGCCTGTCCTCGGCGGTGGGTTTCA                                                                                                        <  2:343749/138‑1                                                                                                                                                   AAACACACCGCGAGATGGCCTCGGGCCTGTCCTCGGCGGTGGGTTTCAAGAACGGTACCGATGGCGGCCTGACCGTTGCCATCAATGCCCTGCAGTCGGTGTCCAAGCCGCACCGCTTCCTGGGCATCAACCAGGAAGGCGGCGTGTCGA  >  1:235069/1‑150                                                                                                                                                                                                                                                                                                          GCAGTACCACGTGGCCGTATGGGTTGCCCTTGGTGGTGACGATCGACACGCCGCCTTCCTGGTTGATGCCCAGGAAGCGGTGCGGCTTGGACACCGACTGCAGGGCATTGATGGCAACGGTCAGGCCGCCATCGGTACCGTTCTTGAAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2651722‑2651871 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaacACACCGCGAGATGGCCTCGGGCCTGTCCTCGGCGGTGGGTTTCAAGAACGGTACCGATGGCGGCCTGACCGTTGCCATCAATGCCCTGCAGTCGGTGTCCAAGCCGCACCGCTTCCTGGGCATCAACCAGGAAGGCGGCGTGTCGA  <  NC_002947/2651909‑2651764

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.