New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2775344 = | 34 (1.070) | 6 (0.200) | 5/236 | NT | 15.7% | coding (211/1353 nt) | PP_5521 | hypothetical protein |
? | NC_002947 | 2775369 = | 32 (1.060) | coding (186/1353 nt) | PP_5521 | hypothetical protein |
CAGTGGCAGCAGGCAGTCATCGCCTATGCCCAGGCCGTCAACGACTACGTCGCGCAGGGCCGTGCGCACGGCTGGGACAACCTCGAAGAGCCGCAGGCACCCGCCACCGAACACCTGCTCGACGCCTGGCTGTCAGCCCTGCAGGCAGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2775494‑2775344 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccaGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGCCCTGCGCGACGTAGTCGTTGACGGCCTGGGCATAGGCGATGACTGCCTGCTGCCACTGCTGCTGGGGGTCTTGCTTGTC > NC_002947/2775369‑2775515 CAGTGGCAGCAGGCAGTCATCGCCTATGCCCAGGCCGTCAACGACTACGTCGCGCAGGGCCGTGCGCACGGCTGGGACAACCTCGAAGAGCCGCAGGCACCCGCCACCGAACACCTGCTCGACGCCTGGCTGTCAGCCCTGCAGGCAGCC < 2:197230/150‑1 TGGCTGTCAGCCCTGCAGGCAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGT > 1:456028/1‑84 TGGCTGTCAGCCCTGCAGGCAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGT < 2:456028/84‑1 TGGCTGTCAGCCCTGCAGGCAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAG > 1:373916/1‑70 TGGCTGTCAGCCCTGCAGGCAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAG < 2:373916/70‑1 TGTCAGCCCTGCAGGCAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGCCCTGCGCGAC < 1:217171/99‑1 TGTCAGCCCTGCAGGCAGCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGCCCTGCGCGAC > 2:217171/1‑99 GCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGCCCTGCGCGACGTAGTCGTTGACGGCCTGGGCATAGG > 1:56172/1‑108 GCCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGCCCTGCGCGACGTAGTCGTTGACGGCCTGGGCATAGG < 2:56172/108‑1 CCAGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGCCCTGCGCGACGTAGTCGTTGACGGCCTGGGCATAGGCGATGACTGCCTGCTGCCACTGCTGCTGGGGGTCTTGCTTGTC > 1:800324/1‑150 CAGTGGCAGCAGGCAGTCATCGCCTATGCCCAGGCCGTCAACGACTACGTCGCGCAGGGCCGTGCGCACGGCTGGGACAACCTCGAAGAGCCGCAGGCACCCGCCACCGAACACCTGCTCGACGCCTGGCTGTCAGCCCTGCAGGCAGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2775494‑2775344 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccaGGCGTCGAGCAGGTGTTCGGTGGCGGGTGCCTGCGGCTCTTCGAGGTTGTCCCAGCCGTGCGCACGGCCCTGCGCGACGTAGTCGTTGACGGCCTGGGCATAGGCGATGACTGCCTGCTGCCACTGCTGCTGGGGGTCTTGCTTGTC > NC_002947/2775369‑2775515 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |