| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2910796 | 19 (0.600) | 3 (0.100) | 3/228 | NT | 11.9% | intergenic (‑316/‑228) | aprDA/PP_2561 | alkaline protease secretion ABC transporter ATP‑binding protein/hemolysin‑type calcium‑binding bacteriocin |
| ? | NC_002947 | = 2910843 | 27 (0.930) | intergenic (‑363/‑181) | aprDA/PP_2561 | alkaline protease secretion ABC transporter ATP‑binding protein/hemolysin‑type calcium‑binding bacteriocin | |||||
GAACTTTTTATAAGTTACAGAAAAACAGTGAGTTGCATCGCATTATCAGCGGCTAAGATTTTTTTGACGAAATATTGACAAGCTTTTGGCCTACGACTTTAGTCTGAAGTATTCGGGGCCCTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2910673‑2910796‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggggccctgtAAACCGTGCGCAACAGGTGTAACGCACGTGCATCGATCCCAGCTCGCACAGGGCCCCGAATACTTCAGACTAAAGTCGTAGGCCAAAAGCTTGTCAATATTTCGTCAAAAAAATCTTAGCCGCTGATAATGCGATGCAACTCACTGTT < NC_002947/2910843‑2910696 GAACTTTTTATAAGTTACAGAAAAACAGTGAGTTGCATCGCATTATCAGCGGCTAAGATTTTTTTGACGAAATATTGACAAGCTTTTGGCCTACGACTTTAGTCTGAAGTATTCG < 1:190004/115‑1GAACTTTTTATAAGTTACAGAAAAACAGTGAGTTGCATCGCATTATCAGCGGCTAAGATTTTTTTGACGAAATATTGACAAGCTTTTGGCCTACGACTTTAGTCTGAAGTATTCG > 2:190004/1‑115 GAGTTGCATCGCATTATCAGCGGCTAAGATTTTTTTGACGAAATATTGACAAGCTTTTGGCCTACGACTTTAGTCTGAAGTATTCGGGGCCCTGTAAACCGTGCGCAACAGGTGTAACGCACGTGCATCGATCCCAGCTCGCACAGGGCC < 2:668093/150‑1 ATCGCATTATCAGCGGCTAAGATTTTTTTGACGAAATATTGACAAGCTTTTGGCCTACGACTTTAGTCTGAAGTATTCGGGGCCCTGTAAACCGTGCGCAACAGGTGTAACGCACGTGCATCGATCCCAGCTCGCACAGGGCCCCGAATA > 2:333658/1‑150 ATTATCAGCGGCTAAGATTTTTTTGACGAAATATTGACAAGCTTTTGGCCTACGACTTTAGTCTGAAGTATTCGGGGCCCTGTAAACCGTGCGCAACAGGTGTAACGCACGTGCATCGATCCCAGCTCGCACAGGGCCCCGAATACTTCA < 1:333658/150‑1 GCCCTGTAAACCGTGCGCAACAGGTGTAACGCACGTGCATCGATCCCAGCTCACACAGGGCCCCGAATACTTCAGACTAAAGTCGTAGGCCAAAAGCTTGTCAATATTTCGTCAAAAAAATCTTAGCCGCTGATAATGCGATGCAACTCA < 1:734603/150‑1 CCTGTAAACCGTGCGCAACAGGTGTAACGCACGTGCATCGATCCCAGCTCGCACAGGGCCCCGAATACTTCAGACTAAAGTCGTAGGCCAAAAGCTTGTCAATATTTCGTCAAAAAAATCTTAGCCGCTGATAATGCGATGCAACTCACT > 1:168942/1‑150 GTAAACCGTGCGCAACAGGTGTAACGCACGTGCATCGATCCAAGCTCGCACAGGGCCCCGAATACTTCAGACTAAAGTCGTAGGCCAAAAGCTTGTCAATATTTCGTCAAAAAAATCTTAGCCGCTGATAATGCGATGCAACTCACTGTT > 2:737367/1‑150 GAACTTTTTATAAGTTACAGAAAAACAGTGAGTTGCATCGCATTATCAGCGGCTAAGATTTTTTTGACGAAATATTGACAAGCTTTTGGCCTACGACTTTAGTCTGAAGTATTCGGGGCCCTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2910673‑2910796‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggggccctgtAAACCGTGCGCAACAGGTGTAACGCACGTGCATCGATCCCAGCTCGCACAGGGCCCCGAATACTTCAGACTAAAGTCGTAGGCCAAAAGCTTGTCAATATTTCGTCAAAAAAATCTTAGCCGCTGATAATGCGATGCAACTCACTGTT < NC_002947/2910843‑2910696 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |