| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2910796 | 19 (0.600) | 3 (0.100) | 3/228 | NT | 11.9% | intergenic (‑316/‑228) | aprDA/PP_2561 | alkaline protease secretion ABC transporter ATP‑binding protein/hemolysin‑type calcium‑binding bacteriocin |
| ? | NC_002947 | = 2910843 | 27 (0.930) | intergenic (‑363/‑181) | aprDA/PP_2561 | alkaline protease secretion ABC transporter ATP‑binding protein/hemolysin‑type calcium‑binding bacteriocin | |||||
CTCTATAAATACTTTGAACTTTTTATAAGTTACAGAAAAACAGTGAGTTGCATCGCATTATCAGCGGCTAAGATTTTTTTGACGAAATATTGACAAGCTTTTGGCCTACGACTTTAGTCTGAAGTATTCGGGGCCCTGTGCGAGCTGGGATCGATGCACGTGCGTTACACCTGTTGCGCACGGTTTACAGGGCCCCTCCGCAACGGGGTGCCTGCTTGCCAAGAAGAGGTCAGAGCTTTCAGCACACGAGTGCTGCGCTACTGAGCCCGGTACACCCAACCAGATTC > NC_002947/2910658‑2910944 | ctctATAAATACTTTGAACTTTTTATAAGTTACAGAAAAACAGTGAGTTGCATCGCATTATCAGCGGCTAAGATTTTTTTGACGAAATATTGACAAGCTTTTGGCCTACGACTTTAGTCTGAAGTATTCGGGGCCCTGTGCGAGCTGGGa > 1:351744/1‑150 (MQ=255) cTTTTTATAAGTTACAGAAAAACAGTGAGTTGCATCGCATTATCAGCGGCTAAGATTTTTTTTTTTTTTTTTTGACAAGCTTTTGGCCTACGACTTTAGTCTGAAGTATTCGGGGCCCTGTGCGAGCTGGGATCGATGCACGTGCGTTac > 2:746440/1‑150 (MQ=255) cAGAAAAACAGTGAGTTGCATCGCATTATCAGCGGCTAAGATTTTTTTGACGAAATATTGACAAGCTTTTGGCCTACGACTTTAGTCTGAAGTATTCGGGGCCCTGTGCGAGCTGGGATCGATGCACGTGCGTTACACCTGTTGCGCACg < 1:717115/150‑1 (MQ=255) aaCAGTGAGTTGCATCGCATTATCAGCGGCTAAGATTTTTTTGACGAAATATTGACAAGCTTTTGGCCTACGACTTTAGTCTGAAGTATTCGGGGCCCTGTGCGAGCTTGGATCGATGCACGTGCGTTACACCTGTTGCGCACGGTTTac > 2:737367‑M2/1‑148 (MQ=255) aGTGAGTTGCATCGCATTATCAGCGGCTAAGATTTTTTTGACGAAATATTGACAAGCTTTTGGCCTACGACTTTAGTCTGAAGTATTCGGGGCCCTGTGCGAGCTGGGATCGATGCACGTGCGTTACACCTGTTGCGCACGGtt > 2:434359/1‑144 (MQ=255) aGTGAGTTGCATCGCATTATCAGCGGCTAAGATTTTTTTGACGAAATATTGACAAGCTTTTGGCCTACGACTTTAGTCTGAAGTATTCGGGGCCCTGTGCGAGCTGGGATCGATGCACGTGCGTTACACCTGTTGCGCACGGtt < 1:434359/144‑1 (MQ=255) aGTGAGTTGCATCGCATTATCAGCGGCTAAGATTTTTTTGACGAAATATTGACAAGCTTTTGGCCTACGACTTTAGTCTGAAGTATTCGGGGCCCTGTGCGAGCTGGGATCGATGCACGTGCGTTACACCTGTTGCGCACGGTTTacagg > 1:168942‑M2/1‑145 (MQ=255) tGAGTTGCATCGCATTATCAGCGGCTAAGATTTTTTTGACGAAATATTGACAAGCTTTTGGCCTACGACTTTAGTCTGAAGTATTCGGGGCCCTGTGTGAGCTGGGATCGATGCACGTGCGTTACACCTGTTGCGCACGGTTTacagggc < 1:734603‑M2/150‑8 (MQ=255) gAGTTGCATCGCATTATCAGCGGCTAAGATTTTTTTGACGAAATATTGACAAGCTTTTGGCCTACGACTTTAGTCTGAAGTATTCGGGGCCCTGTaaaccgtgcgcaacaggtgtaacgcacgtgcatcgatcccagctcgcacagggcc < 2:668093‑M1/150‑56 (MQ=255) aTCGCATTATCAGCGGCTAAGATTTTTTTGACGAAATATTGACAAGCTTTTGGCCTACGACTTTAGTCTGAAGTATTCGGGGCCCTGTaaaccgtgcgcaacaggtgtaacgcacgtgcatcgatcccagctcgcacagggccccgaata > 2:333658‑M1/1‑88 (MQ=255) aTCGCATTATCAGCGGCTAAGATTTTTTTGACGAAATATTGACAAGCTTTTGGCCTACGACTTTAGTCTGAAGTATTCGGGGCCCTGTGCGAGCTGGGATCGATGCACGTGCGTTACACCTGTTGCGCACGGTTTACAGGGCCCCTCCGc > 2:660796/1‑150 (MQ=255) aTTATCAGCGGCTAAGATTTTTTTGACGAAATATTGACAAGCTTTTGGCCTACGACTTTAGTCTGAAGTATTCGGGGCCCTGTaaaccgtgcgcaacaggtgtaacgcacgtgcatcgatcccagctcgcacagggccccgaatacttca < 1:333658‑M1/150‑68 (MQ=255) ttATCAGCGGCTAAGATTTTTTTGACGAAATATTGACAAGCTTTTGGCCTACGACTTTAGTCTGAAGTATTCGGGGCCCTGTGCGAGCTGGGATCGATGCACGTGCGTTACACCTGTTGCGCACGGTTTACAGGGCCCCTCCGCAACggg > 2:40039/1‑150 (MQ=255) tAAGATTTTTTTGACGAAATATTGACAAGCTTTTGGCCTACGACTTTAGTCTGAAGTATTCGGGGCCCTGTGCGAGCTGGGATCGATGCACGTGCGTTACACCTGTTGCGCACGGTTTACAGGGCCCCTCCGCAACGGGGTGCCTGCTTg > 1:491090/1‑150 (MQ=255) aTTTTTTTGACGAAATATTGACAAGCTTTTGGCCTACGACTTTAGTCTGAAGTATTCGGGGCCCTGTGCGAGCTGGGATCGATGCACGTGCGTTACACCTGTTGCGCACGGTTTACAGGGCCCCTCCGCAACGGGGTGCCTGCTTGCCaa < 1:416711/150‑1 (MQ=255) tttttGACGAAATATTGACAAGCTTTTGGCCTACGACTTTAGTCTGAAGTATTCGGGGCCCTGTGCGAGCTGGGATCGATGCACGTGCGTTACACCTGTTGCGCACGGTTTACAGGGCCCCTCCGCAACGGGGTGCCTGCTTGCCaagaa < 1:610599/150‑1 (MQ=255) tttGACGAAATATTGACAAGCTTTTGGCCTACGACTTTAGTCTGAAGTATTCGGGGCCCTGTGCGAGCTGGGATCGATGCACGTGCGTTACACCTGTTGCGCACGGTTTACAGGGCCCCTCCGCAACGGGGTGCCTGCTTGCCAagaaga < 2:491090/150‑1 (MQ=255) cGAAATATTGACAAGCTTTTGGCCTACGACTTTAGTCTGAAGTATTCGGGGCCCTGTGCGAGCTGGGATCGATGCACGTGCGTTACACCTGTTGCGCACGGTTTACAGGGCCCCTCCGCAACGGGGTGCCTGCTTGCCAAGAAGAGGTCa > 2:827469/1‑150 (MQ=255) aaGCTTTTGGCCTACGACTTTAGTCTGAAGTATTCGGGGCCCTGTGCGAGCTGGGATCGATGCACGTGCGTTACACCTGTTGCGCACGGTTTACAGGGCCCCTCCGCAACGGGGTGCCTGCTTGCCAAGAAGAGGTCAGAGCTTTCAGca > 1:551719/1‑150 (MQ=255) tCTGAAGTATTCGGGGCCCTGTGCGAGCTGGGATCGATGCACGTGCGTTACACCTGTTGCGCACGGTTTACAGGGCCCCTCCGCAACGGGGTGCCTGCTTGCCAAGAAGAGGTCAGAGCTTTCAGCACACGAGTGCTGCGCTACTGAGcc > 1:825920/1‑150 (MQ=255) tGAAGTATTCGGGGCCCTGTGCGAGCTGGGATCGATGCACGTGCGTTACCCCTGTTGCGCACGGTTTACAGGGCCCCTCCGCAACGGGGTGCCTGCTTGCCAAGAAGAGGTCAGAGCTTTCAGCACACGAGTGCTGCGCTACTGAGCCCg < 1:746440/150‑1 (MQ=255) tGAAGTATTCGGGGCCCTGTGCGAGCTGGGATCGATGCACGTGCGTTACACCTGTTGCGCACGGTTTacagggccccgaatacttcagactaaagtcgtaggccaaaagcttgtcaatatttcgtcaaaaaaatcttagccgctgataat < 1:333658‑M2/150‑84 (MQ=255) gAAGTATTCGGGGCACTGTGCGAGCGGGGATCGATGCACGTGCGTTACACCTGTTGCGCACGGTTTACAGGGCCCCTCCGCAACGGGGTGCCTGCTTGCCAAGAAGAGGTCAGAGCTTTCAGCACACGAGTGCTGCGCTACTGAGCCCgg > 2:503387/1‑150 (MQ=255) aaGTATTCGGGGCCCTGTGCGAGCTGGGATCGATGCACGTGCGTTACACCTGTTGCGCACGGTTTACAGGGCCCCTCCGCAACGGGGTGCCAGCTTGCCAAGAAGAGGTCAGAGCTTTCAGCACACGAGTGCTGCGCTACTGAGCCCGGt > 2:755092/1‑150 (MQ=255) tATTCGGGGCCCTGTGCGAGCTGGGATCGATGCACGTGCGTTACACCTGTTGCGCACGGTTTacagggccccgaatacttcagactaaagtcgtaggccaaaagcttgtcaatatttcgtcaaaaaaatcttagccgctgataatgcgat > 2:333658‑M2/1‑62 (MQ=255) gggCCCTGTGCGAGCTGGGATCGATGCACGTGCGTTACACCTGTTGCGCACGGTTTACAGGGCCCCTCCGCAACGGGGTGCCTGCTTGCCAAGAAGAGGTCaga > 2:351654/1‑104 (MQ=255) gggCCCTGTGCGAGCTGGGATCGATGCACGTGCGTTACACCTGTTGCGCACGGTTTACAGGGCCCCTCCGCAACGGGGTGCCTGCTTGCCAAGAAGAGGTCaga < 1:351654/104‑1 (MQ=255) ggCCCTGTGCGAGCTGGGATCGATGCACGTGCGTTACACCTGTTGCGCACGGTTTacagggccccgaatacttcagactaaagtcgtaggccaaaagcttgtcaatatttcgtcaaaaaaatcttagccgctgataatgcgatgcaactc < 2:668093‑M2/150‑96 (MQ=255) gCCCTGTaaaccgtgcgcaacaggtgtaacgcacgtgcatcgatcccagctcacacagggccccgaatacttcagactaaagtcgtaggccaaaagcttgtcaatatttcgtcaaaaaaatcttagccgctgataatgcgatgcaactca < 1:734603‑M1/150‑144 (MQ=255) ccTGTaaaccgtgcgcaacaggtgtaacgcacgtgcatcgatcccagctcgcacagggccccgaatacttcagactaaagtcgtaggccaaaagcttgtcaatatttcgtcaaaaaaatcttagccgctgataatgcgatgcaactcact > 1:168942‑M1/1‑5 (MQ=255) ccTGTGCGAGCTGGGATCGATGCACGTGCGTTACACCTGTTGCGCACGGTTTACAGGGCCCCTCCGCAACGGGGTGCCTGCTTGCCAAGAAGAGGTCAGAGCTTTCAGCACACGAGTGCTGCGCTACTGAGCCCGGTACACCCAACCAGa > 1:491208/1‑150 (MQ=255) ccTGTGCGAGCTGGGATCGATGCACGTGCGTTACACCTGTTGCGCACGGTTTACAGGGCCCCTCCGCAACGGGGTGCCTGCTTGCCAAGAAGAGGTCAGAGCTTTCAGCACACGAGTGCTGCGCTACTGAGCCCGGTACACCCAACCAGa < 2:825920/150‑1 (MQ=255) gTaaaccgtgcgcaacaggtgtaacgcacgtgcatcgatccaagctcgcacagggccccgaatacttcagactaaagtcgtaggccaaaagcttgtcaatatttcgtcaaaaaaatcttagccgctgataatgcgatgcaactcactgtt > 2:737367‑M1/1‑2 (MQ=255) | CTCTATAAATACTTTGAACTTTTTATAAGTTACAGAAAAACAGTGAGTTGCATCGCATTATCAGCGGCTAAGATTTTTTTGACGAAATATTGACAAGCTTTTGGCCTACGACTTTAGTCTGAAGTATTCGGGGCCCTGTGCGAGCTGGGATCGATGCACGTGCGTTACACCTGTTGCGCACGGTTTACAGGGCCCCTCCGCAACGGGGTGCCTGCTTGCCAAGAAGAGGTCAGAGCTTTCAGCACACGAGTGCTGCGCTACTGAGCCCGGTACACCCAACCAGATTC > NC_002947/2910658‑2910944 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |