| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2933568 = | 34 (1.070) | 2 (0.070) | 4/230 | NT | 6.3% | coding (577/4890 nt) | PP_2566 | leucine‑rich repeat‑containing protein |
| ? | NC_002947 | 2933595 = | 28 (0.950) | coding (550/4890 nt) | PP_2566 | leucine‑rich repeat‑containing protein | |||||
CCGCCCCGTAGGCCAGCCGCAAACACGCAGTTTGCTGGAGGCTGCCCTGCACAACTTCGAGGGGCTGGACGAAGTCGGTCCTTACAGCAGGCTCACCAACGCCGCTGGCAGCGACACGCCCCTGGCAGGCCTGACGATGGCGGACTTCGTCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2933722‑2933568‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgtcaggcCTGCCAGGGGCGTGTCGCTGCCAGCGGCGTTGGTGAGCCTGCTGTAAGGACCGACTTCGTCCAGCCCCTCGAAGTTGTGCAGGGCAGCCTCCAGCAAACTGCGTGTTTGCGGCTGGCCTACGGGGCGGGTGGCCAGCACATCCG > NC_002947/2933595‑2933738 CCGCCCCGTAGGCCAGCCGCAAACACGCAGTTTGCTGGAGGCTGCCCTGCACAACTTCGAGGGGCTGGACGAAGTCGGTCCTTACAGCAGGCTCACCAACGCCGCTGGCAGCGACACGCCCCTGGCAGGCCTGACGATGGCGGACTTCGT > 2:44276/1‑150 GCCCCGTAGGCCAGCCGCAAACACGCAGTTTGCTGGAGGCTGCCCTGCACAACTTCGAGGGGCTGGACGAAGTCGGTCCTTACAGCAGGCTCACCAACGCCGCTGGCAGCGACACGCCCCTGGCAGGCCTGACGATGGCGGACTTCGTCA < 1:576220/150‑1 GCAAACACGCAGTTTGCTGGAGGCTGCCCTGCACAACTTCGAGGGGCTGGACGAAGTCGGTCCTTACAGCAGGCTCACCAACGCCGCTGGCAGCGACACGCCCCTGGCAGGCCTGACGAAGTCCGCCATCGTCAGGCCTGCCAGGGGCGT > 1:592980/1‑150 CAAACACGCAGTTTGCTGGAGGCTGCCCTGCACAACTTCGAGGGGCTGGACGAAGTCGGTCCTTACAGCAGGCTCACCAACGCCGCTGGCAGCGACACGCCCCTGGCAGGCCTGACGAAGTCCGCCATCGTCAGGCCTGCCAGGGGCGTG < 2:592980/150‑1 GACGAAGTCGGTCCTTACAGCAGGCTCACCAACGCCGCTGGCAGCGACACGCCCCTGGCAGGCCTGACGAAGTCCGCCATCGTCAGGCCT < 1:8316/90‑1 GACGAAGTCGGTCCTTACAGCAGGCTCACCAACGCCGCTGGCAGCGACACGCCCCTGGCAGGCCTGACGAAGTCCGCCATCGTCAGGCCT > 2:8316/1‑90 AGTCGGTCCTTACAGCAGGCTCACCAACGCCGCTGGCAGCGACACGCCCCTGGCAGGCCTGACGATGGCGGACTTCGT < 1:711707/78‑1 AGTCGGTCCTTACAGCAGGCTCACCAACGCCGCTGGCAGCGACACGCCCCTGGCAGGCCTGACGATGGCGGACTTCGT > 2:711707/1‑78 TCAGGCCTGCCAGGGGCGTGTCGCTGCCAGCGGCGTTGGTGAGCCTGCTGTAAGGACCAACTTCGTCCAGCCCTTGGATTTTGTGCAGGGCAGCCTCCAGCAAACTGCGTGTTTGCGGCTGGCCTACGGGGCGGGTGGCCAGCACATCCG > 1:743763/1‑150 GCCTGCCAGGGGCGTGTCGCTGCCAGCGGCGTTGGTGAGCCTGCTGTAAGGACCGACTTCGTCCAGCCCCTCGAAGTTGTGCAGGGCAGCCTCCAGCAAACTGCGTGTTTGCGGCTGGCCTACGGGGCGGGTGGCCA < 1:64797/137‑1 GCCTGCCAGGGGCGTGTCGCTGCCAGCGGCGTTGGTGAGCCTGCTGTAAGGACCGACTTCGTCCAGCCCCTCGAAGTTGTGCAGGGCAGCCTCCAGCAAACTGCGTGTTTGCGGCTGGCCTACGGGGCGGGTGGCCA > 2:64797/1‑137 CCGCCCCGTAGGCCAGCCGCAAACACGCAGTTTGCTGGAGGCTGCCCTGCACAACTTCGAGGGGCTGGACGAAGTCGGTCCTTACAGCAGGCTCACCAACGCCGCTGGCAGCGACACGCCCCTGGCAGGCCTGACGATGGCGGACTTCGTCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2933722‑2933568‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgtcaggcCTGCCAGGGGCGTGTCGCTGCCAGCGGCGTTGGTGAGCCTGCTGTAAGGACCGACTTCGTCCAGCCCCTCGAAGTTGTGCAGGGCAGCCTCCAGCAAACTGCGTGTTTGCGGCTGGCCTACGGGGCGGGTGGCCAGCACATCCG > NC_002947/2933595‑2933738 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |