New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3018222 | 35 (1.110) | 4 (0.140) | 3/232 | NT | 11.8% | coding (2102/2283 nt) | bcsB | cellulose synthase and translocator subunit |
? | NC_002947 | = 3018262 | 27 (0.910) | coding (2142/2283 nt) | bcsB | cellulose synthase and translocator subunit |
TCGCCGTTCCACGAGCAGCGCAGTGTTGTGGCCTTGCTGGCCAACAGCGACAGCGATTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3018071‑3018222 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcagccaCCATGGCAGCGCGCCCACGAAGTAGTGCTCGCCGACGAACTGGCTGCTCACGCCACTGCTGCGTAACAGCGTTACCGAACCCGCCACCGCATCGAGCTTGCCTACATCGCCAAGCATGTCGCGCAGCAATGCGTAATCGCTGTCGC < NC_002947/3018262‑3018117 TCGCCGTTCCACGAGCAGCGCAGTGTTGTGGCCTTGCTGGCCAACAGCGACAGCGATTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTGGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGC > 2:707769/1‑150 GACAGCGATTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCACCATGGCAGCGCGCCCACGAAGTAGTGCTCGCCGACGAACTGGCTG < 1:302551/150‑1 GACAGCGATTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTAAGCATCCACGATAGCAGCGCGCCCACGAAGTAGTGCTCGCCGACGAACTGGCTG < 1:16577/150‑1 GTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCACCATGGCAGCGCGCCCACGAAGTAGTGCTCGCCGACGAACTG > 1:210115/1‑77 GTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCACCATGGCAGCGCGCCCACGAAGTAGTGCTCGCCGACGAACTG < 2:210115/77‑1 GCCACCATGGCAGCGCGCCCACGAAGTAGTGCTCGCCGACGAACTGGCTGCTCACGCCACTGCTGCGTAACAGCGTTACCGAACCCGCCACCGCATCGAGCTTGCCTACATCGCCAAGCATGTCGCGCAGCAATGCGTAATCGCTGTCGC > 1:555749/1‑150 TCGCCGTTCCACGAGCAGCGCAGTGTTGTGGCCTTGCTGGCCAACAGCGACAGCGATTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3018071‑3018222 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcagccaCCATGGCAGCGCGCCCACGAAGTAGTGCTCGCCGACGAACTGGCTGCTCACGCCACTGCTGCGTAACAGCGTTACCGAACCCGCCACCGCATCGAGCTTGCCTACATCGCCAAGCATGTCGCGCAGCAATGCGTAATCGCTGTCGC < NC_002947/3018262‑3018117 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |