New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3018222	35 (1.110)	4 (0.140)	3/232	NT	11.8%	coding (2102/2283 nt)	bcsB	cellulose synthase and translocator subunit
	?	NC_002947	= 3018262	27 (0.910)					coding (2142/2283 nt)	bcsB	cellulose synthase and translocator subunit

GAGCAGCGCAGTGTTGTGGCCTTGCTGGCCAACAGCGACAGCGATTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGAGCACCCTGTGTTGCTGGCGGTGATCGCGGCTGTTTGCGTGGTGCTGTTCGCCTTCTTGTTGTGGCGGGCACTGCGCT  >  NC_002947/3018083‑3018368                                                                                                                                            |                                                                                                                                                   gAGCAGCGCAGTGTTGTGGCCTTGCTGGCCAACAGCGACAGCGATTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGc                                                                                                                                          >  2:329103/1‑150 (MQ=255)   gcagcGCAGTGTTGTGGCCTTGCTGGCCAACAGCGACAGCGATTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGGAGCCAGTTCGTCGGCGa                                                                                                                                        >  2:505586/1‑150 (MQ=255)               tgtgGCCTTGCTGGCCAACAGCGACAGCGATTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGt                                                                                                                            <  1:329103/150‑1 (MQ=255)                gtgGCCTTGCTGGCCAACAGCGACAGCGATTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTg                                                                                                                           <  1:191382/150‑1 (MQ=255)                 tgGCCTTGCTGGCCAACAGCGACAGCGATTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTgg                                                                                                                          >  2:308532/1‑150 (MQ=255)                 tctccTTGCTGGCCAACAGCGACAGCGATTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACAGACCAGTGGGGTGGGCAGCCAGTTCGTCGGCGAGCACTACTTCGTgg                                                                                                                          <  1:787409/147‑1 (MQ=255)                     cTTGCTGGCCAACAGCGACAGCGATTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTgggaga                                                                                                                      >  2:787409/1‑147 (MQ=255)                      ttGCTGGCCAACAGCGACAGCGATTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGgcgcg                                                                                                                     >  1:396499/1‑150 (MQ=255)                          tGGCCAACAGCGACAGCGATTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGc                                                                                                                 >  2:555749/1‑150 (MQ=255)                                   gcgacagcgaTTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGtggc                                                                                                        >  1:555749‑M2/1‑146 (MQ=255)                                     gacagcgaTTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAccatggcagcgcgcccacgaagtagtgctcgccgacgaactggctg                                                                                                      <  1:302551‑M1/150‑47 (MQ=255)                                     gacagcgaTTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTAAGCATCCAcgatagcagcgcgcccacgaagtagtgctcgccgacgaactggctg                                                                                                      <  1:16577‑M1/150‑47 (MQ=255)                                          cgaTTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGgctgctgct                                                                                                 <  1:308532/150‑1 (MQ=255)                                            aTTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCtgt                                                                                               <  1:724449/150‑1 (MQ=255)                                                   aTTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCa                                                                                        >  1:705058/1‑150 (MQ=255)                                                   aTTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCATGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCa                                                                                        >  1:271873/1‑150 (MQ=255)                                                     ggctgcGCGACATGCTTGTCGATGTAGGCAATCTCGATGCGGTTGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCTTTGGGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACt                                                                                      <  2:119512/149‑1 (MQ=255)                                                        tgcGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGt                                                                                   >  2:70298/1‑150 (MQ=255)                                                        tgcGCGACATGCTTGGCGATGTAGGCAAGCTCCAAGTGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGt                                                                                   >  1:708041/1‑150 (MQ=255)                                                             gACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGt                                                                                            >  1:171420/1‑136 (MQ=255)                                                             gACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGt                                                                                            <  2:171420/136‑1 (MQ=255)                                                                      ggCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTtcgtc                                                                                                                                             <  2:557518/78‑1 (MQ=255)                                                                      ggCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTtcgtc                                                                                                                                             >  1:557518/1‑78 (MQ=255)                                                                           tGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGAGCACCCTGTGTTGCt                                                                >  2:464675/1‑150 (MQ=255)                                                                                  aaGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGAGCACCCt                                                                        <  1:155101/135‑1 (MQ=255)                                                                                  aaGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGAGCACCCt                                                                        >  2:155101/1‑135 (MQ=255)                                                                                   aGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCATGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGAGCACCCTGTGTTGCTGGCGGTGa                                                        <  2:271873/150‑1 (MQ=255)                                                                                     cTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGa                                                                                                                                        >  1:215479/1‑68 (MQ=255)                                                                                     cTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGa                                                                                                                                        <  2:215479/68‑1 (MQ=255)                                                                                           gCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGAGCACCCTGTGTTGCTGGCGGTGATCGCGCCt                                                <  2:362047/150‑1 (MQ=255)                                                                                             ggTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGAGCACCCTGTGTTGCTGGCGGTGATCGCGGCTGt                                              >  1:381176/1‑150 (MQ=255)                                                                                               tGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGAGCACCCTGTGTTGCTGGCGGTGATCGCGGCTGttt                                            <  2:359070/150‑1 (MQ=255)                                                                                                   gggTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGAGCACCCTGTGTTGCTGGCGGTGATCGCGGCTGTTTGCgt                                        <  2:396499/150‑1 (MQ=255)                                                                                                          gTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAccatggcagcgcgcccacgaagtagtgctcgccgacgaactg                                                                                                          >  1:210115‑M1/1‑35 (MQ=255)                                                                                                          gTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAccatggcagcgcgcccacgaagtagtgctcgccgacgaactg                                                                                                          <  2:210115‑M1/77‑43 (MQ=255)                                                                                                          gTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGAGCACCCTGTGTTGCTGGCgg                                                           >  2:4663/1‑124 (MQ=255)                                                                                                          gTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGAGCACCCTGTGTTGCTGGCgg                                                           <  1:4663/124‑1 (MQ=255)                                                                                                               gCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGAGCACCCTGTGTTGCTGGCGGTGATCGCGGCTGTTTGCGTGGTGCTGTTCGc                            >  1:704154/1‑150 (MQ=255)                                                                                                                 tGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGAGCACCCTGTGTTGCTGGCGGTGATCGCGGCTGTTTGCGTGGTGCTGGTCGCct                          >  1:668797/1‑150 (MQ=255)                                                                                                                              tGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGAGCACCCTGTGTTGCTGGCGGTGATCGCGGCTGTTTGCGTGGTGCTGTTCGCCTTCTTGTTGTGGCg             <  1:505586/150‑1 (MQ=255)                                                                                                                                       cagcCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCTATCGtggatgcttacgccactgctgcgtaacagcgttaccgaacccgccaccgcatcgagcttgcctacatcgccaagcatgtcgcgcagcaatgcgtaatcgctgtc    <  1:16577‑M2/150‑105 (MQ=255)                                                                                                                                       cagcCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGtggctgctcacgccactgctgcgtaacagcgttaccgaacccgccaccgcatcgagcttgcctacatcgccaagcatgtcgcgcagcaatgcgtaatcgctgtc    <  1:302551‑M2/150‑105 (MQ=255)                                                                                                                                         gcCAccatggcagcgcgcccacgaagtagtgctcgccgacgaactggctgctcacgccactgctgcgtaacagcgttaccgaacccgccaccgcatcgagcttgcctacatcgccaagcatgtcgcgcagcaatgcgtaatcgctgtcgc  >  1:555749‑M1/1‑4 (MQ=255)                                                                                                                                           cAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGtggctgctcacgccactgctgcgtaacagcgttac                                                                         <  2:210115‑M2/77‑36 (MQ=255)                                                                                                                                           cAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGtggctgctcacgccactgctgcgtaacagcgttac                                                                         >  1:210115‑M2/1‑42 (MQ=255)                                                                                                                                            |                                                                                                                                                   GAGCAGCGCAGTGTTGTGGCCTTGCTGGCCAACAGCGACAGCGATTACGCATTGCTGCGCGACATGCTTGGCGATGTAGGCAAGCTCGATGCGGTGGCGGGTTCGGTAACGCTGTTACGCAGCAGTGGCGTGAGCAGCCAGTTCGTCGGCGAGCACTACTTCGTGGGCGCGCTGCCATGGTGGCTGCTGCTGTGGTTCCACTTGTCCGAGCACCCTGTGTTGCTGGCGGTGATCGCGGCTGTTTGCGTGGTGCTGTTCGCCTTCTTGTTGTGGCGGGCACTGCGCT  >  NC_002947/3018083‑3018368

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.