New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4157741 =	33 (1.040)	4 (0.140)	4/232	NT	11.0%	coding (182/888 nt)	PP_3660	LysR family transcriptional regulator
	?	NC_002947	4157772 =	34 (1.150)					coding (151/888 nt)	PP_3660	LysR family transcriptional regulator

GGTTGCCGAACACGGCAACATCAGCCATGCGGCCCAAGCCCTGCACCTGTCTCAGCCGGCGGTGTCCGGCCAGCTCAAGCTCTTGCAAGAGGCGTTTGGCGAGCCCCTTTACCAACGTGCCGGCCGCGGCGTGCGGCTGACAGCGGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4157890‑4157741 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggccggCACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGCTGAGACAGGTGCAGGGCTTGGGCCGCATGGCTGATGTTGCCGTGTTCGGCAACCGTGGCGAACGTTATCAGCTGTTCTGG  >  NC_002947/4157772‑4157916                                                                                                                                                                                                                                                                                                         GGTTGCCGAACACGGCAACATCAGCCATGCGGCCCAAGCCCTGCACCTGTCTCAGCCGGCGGTGTCCGGCCAGCTCAAGCTCTTGCAAGAGGCGTTTGGCGAGCCCCTTTACCAACGTGCCGGCCGCGGCGTGCGGCTGACAGCGGCCGG                                                                                                                                                   >  2:79051/1‑150                    ATCAGCCATGCGGCCCAAGCCCTGCACCTGTCTCAGCCGGCGGTGTCCGGCCAGCTCAAGCTCTTGCAAGAGGCGTTTGGCGAGCCCCTTTACCAACGTGCCGGCCGCTGTCAGCCGCACGCCGCGGCCGGCACGTTGGTAAAGGGGCTC                                                                                                                                <  2:638214/150‑1                                                                                                                         CGGCCGCGGCGTGCGGCTGACAGCGGCCGGCACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGCTGAGACAGGT                                                                        >  1:226928/1‑105                                                                                                                         CGGCCGCGGCGTGCGGCTGACAGCGGCCGGCACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGCTGAGACAGGT                                                                        <  2:226928/105‑1                                                                                                                           GCCGCGGCGTGCGGCTGACAGCGGCCGGCACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGCTGAGACAGGTGCAGGGCTTGGGCCGCATGGCTGATGTTGCCGTGTTCGGCAACCGTG                         <  1:638214/150‑1                                                                                                                                                  GCCGGCACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGCTGAGACAGGTGCAGGGCTTGGGCCGCATGGCTGATGTTGCCGTGTTCGGCAACCGTGGCGAACGTTATCAGCTGTTCTGG  <  1:568450/150‑1                                                                                                                                                                                                                                                                                                         GGTTGCCGAACACGGCAACATCAGCCATGCGGCCCAAGCCCTGCACCTGTCTCAGCCGGCGGTGTCCGGCCAGCTCAAGCTCTTGCAAGAGGCGTTTGGCGAGCCCCTTTACCAACGTGCCGGCCGCGGCGTGCGGCTGACAGCGGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4157890‑4157741 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggccggCACGTTGGTAAAGGGGCTCGCCAAACGCCTCTTGCAAGAGCTTGAGCTGGCCGGACACCGCCGGCTGAGACAGGTGCAGGGCTTGGGCCGCATGGCTGATGTTGCCGTGTTCGGCAACCGTGGCGAACGTTATCAGCTGTTCTGG  >  NC_002947/4157772‑4157916

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.