New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4334176 =	51 (1.610)	4 (0.130)	4/236	NT	7.0%	coding (65/1053 nt)	yaiW	lipoprotein
	?	NC_002947	4334214 =	58 (1.920)					coding (27/1053 nt)	yaiW	lipoprotein

GCCGGGCACCCGCAGTTCCGCCACATCAGCAAAACCTACCTGATCGGTGAACAGCCCTGAACGGCCGGTTACTGGCCATTTCGGTGATGGCCCTGGTGCTGTTGCAAGGCTGTGCCGGGCGCCGCGAAGAAGCGCCCGAAGCGGACCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4334326‑4334176 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccggcACAGCCTTGCAACAGCACCAGGGCCATCACCGAAATGGCCAGTAACCGGCCGTTCAGGGCTGTTCACCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGG  >  NC_002947/4334214‑4334360                                                                                                                                                                                                                                                                                                            GCCGGGCACCAGCAGTTCCGCCACATCAGCACAACATACCTGATCGGTGAACAGCCCTGAACGGCCGGTTACTGGCCATTTCGGTGATGGCCCTGGTGCTGTTGCAAGGCTGTGCCGGGCGCCGCGAAGAAGCGCCCGAAGCGGACCCGG                                                                                                                                                      <  2:684303/150‑1                                            TCGGTGAACAGCCCTGAACGGCCGGTTACTGGCCATTTCGGTGATGGCCCTGGTGCTGTTGCAAGGCTGTGCCGGGCGCCGCGAAGAAGCGCCCGAAGCGGAC                                                                                                                                                          >  1:669293/1‑103                                            TCGGTGAACAGCCCTGAACGGCCGGTTACTGGCCATTTCGGTGATGGCCCTGGTGCTGTTGCAAGGCTGTGCCGGGCGCCGCGAAGAAGCGCCCGAAGCGGAC                                                                                                                                                          <  2:669293/103‑1                                                                                                                    CGGGCGCCGCGAAGAAGCGCCCGAAGCGGACCCGGCACAGCCTTGCAACAGCACCAGGGCCATCACCGAAATGGCCAGTAACCGGCCGTTCAGGGCTGTTCACCGATCAGGTAGGTTTTGCTGATGTGGCG                                                      <  1:738841/131‑1                                                                                                                    CGGGCGCCGCGAAGAAGCGCCCGAAGCGGACCCGGCACAGCCTTGCAACAGCACCAGGGCCATCACCGAAATGGCCAGTAACCGGCCGTTCAGGGCTGTTCACCGATCAGGTAGGTTTTGCTGATGTGGCG                                                      >  2:738841/1‑131                                                                                                                      GGCGCCGCGAAGAAGCGCCCGAAGCGGACCCGGCACAGCCTTGCAACAGCACCAGGGCCATCACCGAAATGGCCAGTAACCGGCCGTTCAGGGCTGTTCACCGATCAGGTAGGTTTTGCTGA                                                             >  1:3299/1‑122                                                                                                                      GGCGCCGCGAAGAAGCGCCCGAAGCGGACCCGGCACAGCCTTGCAACAGCACCAGGGCCATCACCGAAATGGCCAGTAACCGGCCGTTCAGGGCTGTTCACCGATCAGGTAGGTTTTGCTGA                                                             <  2:3299/122‑1                                                                                                                                                     GGCACAGCCTTGCAACAGCACCAGGGCCATCACCGCGTCGTCCAGTAACCGGCCGTTCAGGGCTGTTCACCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGG  <  1:684303/150‑1                                                                                                                                                     GGCACAGCCTTGCAACAGCACCAGGGCCATCACCGAAATGGCCAGTAACCGGCCGTTCAGGGCTGTTCACCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGG  <  2:158719/150‑1                                                                                                                                                                                                                                                                                                            GCCGGGCACCCGCAGTTCCGCCACATCAGCAAAACCTACCTGATCGGTGAACAGCCCTGAACGGCCGGTTACTGGCCATTTCGGTGATGGCCCTGGTGCTGTTGCAAGGCTGTGCCGGGCGCCGCGAAGAAGCGCCCGAAGCGGACCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4334326‑4334176 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccggcACAGCCTTGCAACAGCACCAGGGCCATCACCGAAATGGCCAGTAACCGGCCGTTCAGGGCTGTTCACCGATCAGGTAGGTTTTGCTGATGTGGCGGAACTGCGGGTGCCCGGCACTGCCCATCAATTCGAACAACACCATCTCGCGG  >  NC_002947/4334214‑4334360

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.