New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4419786 = | 22 (0.690) | 3 (0.100) | 3/232 | NT | 14.1% | coding (509/552 nt) | PP_3910 | hypothetical protein |
? | NC_002947 | 4419828 = | 16 (0.540) | coding (551/552 nt) | PP_3910 | hypothetical protein |
CATGATCACGCCTGGCTCACCGTTGGCGATCACGCGTCGCCCGATCTCGGCCGGCACGTCGTAATGGCGGCGAACGTAATCGCAGTTGTAGTTGCTCATGGATCGCTCCCTAATCAGGCCGCTTTGCGCTGGTTGAGCAAGCGCTGGCGAGCGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4419942‑4419786 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcggcctGATTAGGGAGCGATCCATGAGCAACTACAACTGCGATTACGTTCGCCGCCATTACGACGTGCCGGCCGAGATCGGGCGACGCGTGATCGCCAACGGTGAGCCAGGCGTGATCATGGCCGACCGCGGCCATTACATCGGCGTGATCC > NC_002947/4419828‑4419973 CATGATCACGCCTGGCTCACCGTTGGCGATCACGCGTCGCCCGATCTCGGCCGGCACGTCGTAATGGCGGCGAACGTAATCGCAGTTGTAGTTGCTCATGGATCGCTCCCTAATCAGGCCGCTTTGCGCTGGTTGAGCAAGCGCTGGCGA > 1:457228/1‑150 CATGATCACGCCTGGCTCACCGTTGGCGATCACGCGTCGCCCGATCTCGGCCGGCACGTCGTAATGGCGGCGAACGTAATCGCAGTTGTAGTTGCTCATGGATCGCTCCCTAATCAGGCCGCTTTGCGCTGGTTGAGCAAGCGCTGGCGA < 2:832874/150‑1 GATCACGCCTGGCTCACCGTTGGCGATCACGCGTCGCCCGATCTCGGCCGGCACGTCGTAATGGCGGCGAACGTAATCGCAGTTGTAGTTGCTCATGGATCGCTCCCTAATCAGGCCGCTTTGCGCTGGTTGAGCAAGCGCTGGCGAGCG < 2:457228/150‑1 ACGTCGTAATGGCGGCGAACGTAATCGCAGTTGTAGTTGCTCATGGATCGCTCCCTAATCAGGCCGCTTTGCGCTGGTTGAGCAAGCGCTGGCGA > 1:98005/1‑95 ACGTCGTAATGGCGGCGAACGTAATCGCAGTTGTAGTTGCTCATGGATCGCTCCCTAATCAGGCCGCTTTGCGCTGGTTGAGCAAGCGCTGGCGA < 2:98005/95‑1 CCTAATCAGGCCGCTTTGCGCTGGTTGAGCAAGCGCTGGCGAGCGGCCTGATTAGGGAGCGATCCATGAGCAACTACAACTGCGATTACGTTCGCCGCCATTACGACGTGCCGGCCGAGATCGGGCGACGCGTGATCGCCAACGGTGAGC > 2:951/1‑150 GGCCGCTTTGCGCTGGTTGAGCAAGCGCTGGCGAGCGGCCTGATTAGGGAGCGATCCATGAGCAACTACAACTGCGATTACGTTCGCCGCCATTACGACGTGCCGGCCGAGATCGGGCGACGC < 1:705023/123‑1 GGCCGCTTTGCGCTGGTTGAGCAAGCGCTGGCGAGCGGCCTGATTAGGGAGCGATCCATGAGCAACTACAACTGCGATTACGTTCGCCGCCATTACGACGTGCCGGCCGAGATCGGGCGACGC > 2:705023/1‑123 GAGCGGCCTGATTAGGGAGCGATCCATGAGCAACTACAACTGCGATTACGTTCGCCGCCATTACGACGTGCCGGCCGAGATCGGGCGACGCGTGATCGCCAACGGTGAGCCAGGCGTGATCATGGCCGACCGCGGCCATTACATCGGCGT < 1:951/150‑1 GCCTGATTAGGGAGCGATCCATGAGCAACTACAACTGCGATTACGTTCGCCGCCATTACGACGTGCCGGCCGAGATCGGGCGACGCGTGATCGCCAACGGTGAGCCAGGCGTGATCATGGCCGACCGCGGCCATTACATCGGCGTGATCC > 1:635255/1‑150 TGATTAGGGAGCGATCCATGAGCAACTACAACTGCGATTACGTTCGCCGCCATTACGACGTGCCGGCCGAGATCGGGCGACGCGTGATCGCCAACGGTGAGCCAGGCGTGATCATGGCCGACCGC > 1:639124/1‑125 TGATTAGGGAGCGATCCATGAGCAACTACAACTGCGATTACGTTCGCCGCCATTACGACGTGCCGGCCGAGATCGGGCGACGCGTGATCGCCAACGGTGAGCCAGGCGTGATCATGGCCGACCGC < 2:639124/125‑1 CATGATCACGCCTGGCTCACCGTTGGCGATCACGCGTCGCCCGATCTCGGCCGGCACGTCGTAATGGCGGCGAACGTAATCGCAGTTGTAGTTGCTCATGGATCGCTCCCTAATCAGGCCGCTTTGCGCTGGTTGAGCAAGCGCTGGCGAGCGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4419942‑4419786 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcggcctGATTAGGGAGCGATCCATGAGCAACTACAACTGCGATTACGTTCGCCGCCATTACGACGTGCCGGCCGAGATCGGGCGACGCGTGATCGCCAACGGTGAGCCAGGCGTGATCATGGCCGACCGCGGCCATTACATCGGCGTGATCC > NC_002947/4419828‑4419973 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |