New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4419786 =	22 (0.690)	3 (0.100)	3/232	NT	14.1%	coding (509/552 nt)	PP_3910	hypothetical protein
	?	NC_002947	4419828 =	16 (0.540)					coding (551/552 nt)	PP_3910	hypothetical protein

GGCGGTATGTGCTTCAGCCACGGCGATACCGTATACCTGAACCTGGGCAGCAAGGCCGCTGACGGCGATGTCGACGGCCTGATTGAGATCGTCAGCAGCGAGTACGAGGCCGCTCGCCAGCGCTTGCTCAACCAGCGCAAAGCGGCCTGATTAGGGAGCGATCCATGAGCAACTACAACTGCGATTACGTTCGCCGCCATTACGACGTGCCGGCCGAGATCGGGCGACGCGTGATCGCCAACGGTGAGCCAGGCGTGATCATGGCCGACCGCGGCCATTACATCGGCGTGATCC  >  NC_002947/4419680‑4419973                                                                                                                                                     |                                                                                                                                                  ggCGGTATGTGCTTCAGCCACGGCGATACCGTATACCTGAACCTGGGCAGCAAGGCCGCTGACGGCGATGTCGACGGCCTGATTGAGATCGTCAGCAGCGAGTACGAGGCCGCTCGCCAGCGCTTGCTCAACCAGCGCAAAGCGGCCTGa                                                                                                                                                  <  2:688696/150‑1 (MQ=255)  gCGGTATGTGCTTCAGCCACGGCGATACCGTATACCTGAACCTGGGCAGCAAGGCCGCTGACGGCGATGTCGACGGCCTGATTGAGATCGTCAGCAGCGAGTACGAGGCCGCTCGCCAGCGCTTGCTCAACCAACGCAAAGCGGCCTGAt                                                                                                                                                 >  2:21068/1‑150 (MQ=255)      tATGTGCTTCAGCCACGGCGATACCGTATACCTGAACAAAGGCAGCAAGGCCGCTGACGGCGATGTCGACGGCCTGATTGAGATCGTCAGCAGCGAGTACGAGGCCGCTCGCCAGCGCTTGCTCAACCAGCGCAAAGCGGCCTGATTAgg                                                                                                                                             <  1:472942/150‑1 (MQ=255)      gctcaccgttggcgatcacgcgtcgcccgatctcggccggcacgtcgtaatggcggcgaacgtaatcgcagttgtagttgctcatggatcgctccctaatcAGGCCGCTCGCCAGCGCTTGCTCAACCAGCGCAAAGCGGCCTGATTAgg                                                                                                                                             >  2:951‑M1/102‑150 (MQ=255)                  ccACGGCGATACCGTATACCTGAACCTGGGCAGCAAGGCCGCTGACGGCGATGTCGACGGCCTGATTGAGATCGTCAGCAGCGAGTACGAGGCCGCTCGCCAGCGCTTGCTCAACCAGCGCAAAGCGGCCTGATTAGGGAGCGATACATg                                                                                                                                 >  1:601749/1‑150 (MQ=255)                   cACGGCGATACCGTATACCTGAACCTGGGCAGCAAGGCCGCTGACGGCGATGTCGACGGCCTGATTGAGATCGTCAGCAGCGAGTACGAGGCCGCTCGCCAGCGCTTGCTCAACCAGCGCAAAGCGGCCTGATTAGGGAGCGATCCATGa                                                                                                                                <  2:305849/150‑1 (MQ=255)                            aCCGTATACCTGAACCTGGGCAGCAAGGCCGCTGACGGCGATGTCGACGGCCTGATTGAGATCGTCAGCAGCGAGTACGAGGCCGCTCGCCAGCGCTTGCTCAACCAGCGCAAAGCGGCCTGATTAGGGAGCGATCCATGAGCAACTACa                                                                                                                       >  1:497685/1‑150 (MQ=255)                                tataCCTGAACCTGGGCAGCAAGGCCGCTGACGGCGATGTCGACGGCCTGATTGAGATCGTCAGCAGCGAGTACGAGGCCGCTCGCCAGCGCTTGCTCAACCAGCGCAAAGCGGCCTGATTAGGGAGCGATCCATGAGCAACTACAACTg                                                                                                                   <  1:21068/150‑1 (MQ=255)                                       gAACCTGGGCAGCAAGGCCGCTGACGGCGATGTCGACGGCCTGATTGAGATCGTCAGCAGCGAGTACGAGGCCGCTCGCCAGCGCTTGCTCAACCAGCGCAAAGCGGCCTGATTAGGGAGCGATCCATGAGCAACTACAACTGCGATTAc                                                                                                            <  2:497685/150‑1 (MQ=255)                                          ccTGGGCAGCAAGGCCGCTGACGGCGATGTCGACGGCCTGATTGAGATCGTCAGCAGCGAGTACGAGGCCGCTCGCCAGCGCTTGCTCAACCAGCGCAAAGCGGCCTGATTAgg                                                                                                                                             >  2:683667/1‑114 (MQ=255)                                          ccTGGGCAGCAAGGCCGCTGACGGCGATGTCGACGGCCTGATTGAGATCGTCAGCAGCGAGTACGAGGCCGCTCGCCAGCGCTTGCTCAACCAGCGCAAAGCGGCCTGATTAgg                                                                                                                                             <  1:683667/114‑1 (MQ=255)                                            tGGGCAGCAAGGCCGCTGACGGCGATGTCGACGGCCTGATTGAGATCGTCAGCAGCGAGTACGAGGCCGCTCGCCAGCGCTTGCTCAACCAGCGCAAAGCGGCCTGATTAGGGAGCGATCCATGAGCAACTACAACTGCGATTACGTTcg                                                                                                       >  2:428949/1‑150 (MQ=255)                                                         cGCTGACGGCGATGTCGACGGCCTGATTGAGATCGTCAGCAGCGAGTACGAGGCCGCTCGCCAGCGCTTGCTCAACCAGCGCAAAGCGGCCTGATTAGGGAGCGATCCATGAGCAACTACAACTGCGATTACGTTCGCCGCCATTacgac                                                                                          <  1:701634/150‑1 (MQ=255)                                                                ggCGATGTCGACGGCCTGATTGAGATCGTCAGCAGCGAGTACGAGGCCGCTCGCCAGCGCTTGCTCAACCAGCGCAAAGCGGCCTGATTAGGGAGCGATCCATGAGCAACTACAACTGCGATTACGTTCGCCGCCATTACGACGTgccgg                                                                                   >  2:799395/1‑150 (MQ=255)                                                                          aCGGCCTGATTGAGATCGTCAGCAGCGAGTACGAGGCCGCTCGCCAGCGCTTGCTCAACCAGCGCAAAGCGGCCTGATTAGGGAGCGATCCATGAGCAACTACAACTGCGATTACGTTCGCCGCCATTACGACGTGCCGGCCGAGATCgg                                                                         <  1:597478/150‑1 (MQ=255)                                                                           cGGCCTGATTGAGATCGTCAGCAGCGAGTACGAGGCCGCTCGCCAGCGCTTGCTCAACCAGCGCAAAGCGGCCTGATTAGGGAGCGATCCATGAGCAACTACAACTGCTATTACGTTCGTCGCCATTACGACGTGCCGGCCGAGATCggg                                                                        <  2:158307/150‑1 (MQ=255)                                                                                                    cctaatcaggccgctttgcgctggttgagcaagcgctggcgagcggcctGATTAGGGAGCGATCCATGAGCAACTACAACTGCGATTACGTTCGCCGCCATTACGACGTGCCGGCCGAGATCGGGCGACGCGTGATCGCCAACGGTGAGc                                               >  2:951‑M2/50‑150 (MQ=255)                                                                                                          gAGGCCGCTCGCCAGCGCTTGCTCAACCAGCGCAAAGCGGCCTGATTAGGGAGCGATCCATGAGCAACTACAACTGCGATTACGTTCGCCGCCATTACGACGTGCCGGCCGAGATCGGGCGACGCGTGATCGCCAACGGTGAGCTAGGCg                                         <  2:481100/150‑1 (MQ=255)                                                                                                          gAGGCCGCTCGCCAGCGCTTGCTCAACCAGCGCAAAGCGGCCTGATTAGGGAGCGATCCATGAGCAACTACAACTGCGATTACGTTCGCCGCCATTACGACGTGCCGGCCGAGATCGGGCGACGCGTGATCGCCAACGGTGAGCCAGGCg                                         >  2:726504/1‑150 (MQ=255)                                                                                                            ggccgctttgcgctggttgagcaagcgctggcgagcggcctGATTAGGGAGCGATCCATGAGCAACTACAACTGCGATTACGTTCGCCGCCATTACGACGTGCCGGCCGAGATCGGGCGAcgc                                                                  >  2:705023‑M2/42‑123 (MQ=255)                                                                                                            ggccgctttgcgctggttgagcaagcgctggcgagcggcctGATTAGGGAGCGATCCATGAGCAACTACAACTGCGATTACGTTCGCCGCCATTACGACGTGCCGGCCGAGATCGGGCGAcgc                                                                  <  1:705023‑M2/82‑1 (MQ=255)                                                                                                               CGCTCGCCAGCGCTTGCTCAACCAGCGCAAAGCGGCCTGATTAGGGAGCGATCCATGAGCAACTACAACTGCGATTACGTTCGCCGCCATTACGACGTGCCGGCCGAGATCGGGCGACGCGTGATCGCCAACGGTGAGCCAGGCGTGATc                                    <  2:457228‑M1/150‑1 (MQ=255)                                                                                                                  TCGCCAGCGCTTGCTCAACCAGCGCAAAGCGGCCTGATTAGGGAGCGATCCATGAGCAACTACAACTGCGATTACGTTCGCCGCCATTACGACGt                                                                                        >  1:98005‑M1/1‑95 (MQ=255)                                                                                                                  TCGCCAGCGCTTGCTCAACCAGCGCAAAGCGGCCTGATTAGGGAGCGATCCATGAGCAACTACAACTGCGATTACGTTCGCCGCCATTACGACGt                                                                                        <  2:98005‑M1/95‑1 (MQ=255)                                                                                                                  TCGCCAGCGCTTGCTCAACCAGCGCAAAGCGGCCTGATTAGGGAGCGATCCATGAGCAACTACAACTGCGATTACGTTCGCCGCCATTACGACGTGCCGGCCGAGATCGGGCGACGCGTGATCGCCAACGGTGAGCCAGGCGTGATCATg                                 <  2:832874‑M1/150‑1 (MQ=255)                                                                                                                  TCGCCAGCGCTTGCTCAACCAGCGCAAAGCGGCCTGATTAGGGAGCGATCCATGAGCAACTACAACTGCGATTACGTTCGCCGCCATTACGACGTGCCGGCCGAGATCGGGCGACGCGTGATCGCCAACGGTGAGCCAGGCGTGATCATg                                 >  1:457228‑M1/1‑150 (MQ=255)                                                                                                                        gcgcTTGCTCAACCAGCGCAAAGCGGCCTGATTAGGGAGCGATCCATGAGCAACTACAACTGCGATTACGTTCGCCGCCATTACGACGTGCCGGCCGAGATCGGGCGACGCGTGATCGCCAACGGTGAGCCAGGCGTGATCATGGCCGAc                           <  1:832874/150‑1 (MQ=255)                                                                                                                                           aaaGCGGCCTGATTAGGGAGCGATCCATGAGCAACTACAACTGCGATTACGTTCGCCGCCATTAAGACATGCCGGCCGAGATAGGGCGACGCGTGATCGCCAACGGTGAGCCAGGCGTGATCATGGCCGACCGCGGCCGTTACATCcgcg        >  2:26933/1‑150 (MQ=255)                                                                                                                                            gagcggcctGATTAGGGAGCGATCCATGAGCAACTACAACTGCGATTACGTTCGCCGCCATTACGACGTGCCGGCCGAGATCGGGCGACGCGTGATCGCCAACGGTGAGCCAGGCGTGATCATGGCCGACCGCGGCCATTACATCGGCGt       <  1:951‑M2/141‑1 (MQ=255)                                                                                                                                                 gcctGATTAGGGAGCGATCCATGAGCAACTACAACTGCGATTACGTTCGCCGCCATTACGACGTGCCGGCCGAGATCGGGCGACGCGTGATCGCCAACGGTGAGCCAGGCGTGATCATGGCCGACCGCGGCCATTACATCGGCGTGATcc  >  1:635255‑M2/5‑150 (MQ=255)                                                                                                                                                    tGATTAGGGAGCGATCCATGAGCAACTACAACTGCGATTACGTTCGCCGCCATTACGACGTGCCGGCCGAGATCGGGCGACGCGTGATCGCCAACGGTGAGCCAGGCGTGATCATGGCCGACcgc                        <  2:639124‑M2/124‑1 (MQ=255)                                                                                                                                                    tGATTAGGGAGCGATCCATGAGCAACTACAACTGCGATTACGTTCGCCGCCATTACGACGTGCCGGCCGAGATCGGGCGACGCGTGATCGCCAACGGTGAGCCAGGCGTGATCATGGCCGACcgc                        >  1:639124‑M2/2‑125 (MQ=255)                                                                                                                                                     |                                                                                                                                                  GGCGGTATGTGCTTCAGCCACGGCGATACCGTATACCTGAACCTGGGCAGCAAGGCCGCTGACGGCGATGTCGACGGCCTGATTGAGATCGTCAGCAGCGAGTACGAGGCCGCTCGCCAGCGCTTGCTCAACCAGCGCAAAGCGGCCTGATTAGGGAGCGATCCATGAGCAACTACAACTGCGATTACGTTCGCCGCCATTACGACGTGCCGGCCGAGATCGGGCGACGCGTGATCGCCAACGGTGAGCCAGGCGTGATCATGGCCGACCGCGGCCATTACATCGGCGTGATCC  >  NC_002947/4419680‑4419973

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.