New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4647603 =	18 (0.570)	4 (0.180)	4/170	NT	29.3%	intergenic (+10/+121)	fusB/PP_4112	elongation factor G 2/sulfate transporter
	?	NC_002947	4647711 =	7 (0.320)					intergenic (+118/+13)	fusB/PP_4112	elongation factor G 2/sulfate transporter

GCGTGGTGCATTTGTCGGAGCGGTGCAAGAAGCTGTTGAAGCGGGCGGGCGAGCAGCATTGAAAACTGTTGCGGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4647785‑4647603 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtaggagcgggtttacccgcgaagaggccggcacagACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAACGGCCGAATAATCGAC  >  NC_002947/4647711‑4647855                                                                                                                                                                                                                                                                                                                                          GCGTGGTGCATTTGTCGGAGCGGTGCAAGAAGCTGTTGAAGCGGGCGGGCGAGCAGCATTGAAAACTGTTGCGGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTTCTACAGGGGGGCGCACAATGTTTAGGTGCTCGGCCATCCTGTA                                                                                                                                                                                    <  1:457841/150‑1      GTGCATTTGTCGGAGCGGTGCAAGAAGCTGTTGAAGCGGGCGGGCGAGCAGCATTGAAAACTGTTGCGGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTG                                                                                                                                                                                      >  2:331245/1‑143      GTGCATTTGTCGGAGCGGTGCAAGAAGCTGTTGAAGCGGGCGGGCGAGCAGCATTGAAAACTGTTGCGGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTG                                                                                                                                                                                      <  1:331245/143‑1        ggATTTGTCGTAGCGGTGCAAGAAGCTGTTGAAGCGGGCGGGCGAGCAGCATTGAAAACTGTTGCGGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGG                                                                                                                                                                             <  2:519754/148‑1              GTCGGAGCGGTGCAAGAAGCTGTTGAAGCGGGCGGGCGAGCAGCATTGAAAACTGTTGCGGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTAC                                                                                                                                                                       <  1:791858/150‑1                     CGGTGCAAGAAGCTGTTGAAGCGGGCGGGCGAGCAGCATTGAAAACTGTTGCGGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAA                                                                                                                                                                <  2:628748/150‑1                                                              AAAACTGTTGCGGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGG                                                                                                                                                                             >  2:780629/1‑96                                                              AAAACTGTTGCGGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGG                                                                                                                                                                             <  1:780629/96‑1                                                                            CTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAG                                                                                                                                                                                   >  2:577024/1‑76                                                                            CTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAG                                                                                                                                                                                   <  1:577024/76‑1                                                                                                GTAAACCCGCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACC                                                                                                                                                                      <  1:63256/69‑1                                                                                                GTAAACCCGCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACC                                                                                                                                                                      >  2:63256/1‑69                                                                                                  aatCCCGCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAG                                                                                                                                                   <  1:101088/83‑1                                                                                                  AAACCCGCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAG                                                                                                                                                   >  2:101088/1‑86                                                                                                        GCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTG                                                                                                                             >  1:498311/1‑102                                                                                                        GCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTG                                                                                                                             <  2:498311/102‑1                                                                                                              ACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGC                                                                                                                                                           <  1:216675/66‑1                                                                                                              ACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGC                                                                                                                                                           >  2:216675/1‑66                                                                                                                AGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTC                                                                                                                          <  1:652658/97‑1                                                                                                                AGGGGGGCGCACAATGTTGGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTC                                                                                                                          >  2:652658/1‑97                                                                                                                                                                    CCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAAC                 >  1:824771/1‑150                                                                                                                                                                      GCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCACCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGC                                           >  2:376877/1‑122                                                                                                                                                                      GCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCACCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGC                                           <  1:376877/122‑1                                                                                                                                                                               CCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAACGGCCGAATAAT      <  1:489059/150‑1                                                                                                                                                                                   CACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAACGGCCGAATAATCGAC  >  2:292530/1‑150                                                                                                                                                                                                                                                                                                                                          GCGTGGTGCATTTGTCGGAGCGGTGCAAGAAGCTGTTGAAGCGGGCGGGCGAGCAGCATTGAAAACTGTTGCGGTCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4647785‑4647603 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtaggagcgggtttacccgcgaagaggccggcacagACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAACGGCCGAATAATCGAC  >  NC_002947/4647711‑4647855

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.