New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4726117 = | 49 (1.550) | 4 (0.130) | 4/240 | NT | 7.8% | coding (1311/1314 nt) | brnQ | branched‑chain amino acid transporter |
? | NC_002947 | 4726160 = | 47 (1.530) | coding (1268/1314 nt) | brnQ | branched‑chain amino acid transporter |
AGGGCAGCAGCCTTGCCCACGTGTTGCCAGACTTCATGGCGCACCTGCCATTGAGTGATGCCGGCATGGCCTGGCTGGTACCTTCGGTGGTGACCCTGGTGGGTGCCGTGGCCTGCGACCGCATGCTCGGCAAGCCGCGCGAGGCGCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4726268‑4726117 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccACGGCACCCACCAGGGTCACCACCGAAGGTACCAGCCAGGCCATGCCGGCATCACTCAATGGCAGGTGCGCCATGAAGTCTGGCAACACGTGGGCAAGGCTGCTGCCCTTGATC > NC_002947/4726160‑4726273 AGGGCAGCAGCCTTGCCCACGTGTTGCCAGACTTCATGGCGCACCTGCCATTGAGTGATGCCGGCATGGCCTGGCTGGTACCTTCGGTGGTGACCCTGGTGGGTGCCGTGGCCTGCGACCGCATGGACGGCAAGGCGCGCGAGGCGCTGG > 2:198573/1‑150 GGGCAGCAGCCTTGCCCACGTGTTGCCAGACTTCATGGCGCACCTGCCATTGAGTGATGCCGGCATGGCCTGGCTGGTACCTTCGGTGGTGACCCTGGTGGGTGCCGTGGCCTGCGACCGCATGCTCGGCAAGCCGCGCGAGGCGCTGGC < 2:30878/150‑1 CAGCCTTGCCCACGTGTTGCCAGACTTCATGGCGCACCTGCCATTGAGTGATGCCGGCATGGCCTGGCTGGTACCTTCGGTGGTGACCCTGGTGGGTGCCGTGGCCTGCGACCGCATGCTCGGCAAGCCGCGCGAGGCGCTGGC > 1:676542/1‑144 CAGCCTTGCCCACGTGTTGCCAGACTTCATGGCGCACCTGCCATTGAGTGATGCCGGCATGGCCTGGCTGGTACCTTCGGTGGTGACCCTGGTGGGTGCCGTGGCCTGCGACCGCATGCTCGGCAAGCCGCGCGAGGCGCTGGC < 2:676542/144‑1 GCCGTGGCCTGCGACCGCATGCTCGGCAAGCCGCGCGAGGCGCTGGCCACGGCACCCACCAGGGTCACCACCGAAGGTACCAGCCAG < 1:754563/87‑1 GCCGTGGCCTGCGACCGCATGCTCGGCAAGCCGCGCGAGGCGCTGGCCACGGCACCCACCAGGGTCACCACCGAAGGTACCAGCCAG > 2:754563/1‑87 CTGCGACCGCATGCTCGGCAAGCCGCGCGAGGCGCTGGCCACGGCACCCACCAGGGTCACCACCGAAGGTACCAGCCAGGCCATGCCGGCATCACTCAATGGCAGGTGCGCCATGAAGTCTGGCAACACGTGGGCAAGGCTGCTGCCCTT > 1:129805/1‑150 GACCGCATGCTCGGCAAGCCGCGCGAGGCGCTGGCCACGGCACCCACCAGGGTCACCACCGAAGGTACCAGCCAGGCCATGCCGGCATCACTCAATGGCAGGTGCGCCATGAAGTCTGGCAACACGTGGGCAAGGCTGCTGCCCTTGATC < 2:129805/150‑1 AGGGCAGCAGCCTTGCCCACGTGTTGCCAGACTTCATGGCGCACCTGCCATTGAGTGATGCCGGCATGGCCTGGCTGGTACCTTCGGTGGTGACCCTGGTGGGTGCCGTGGCCTGCGACCGCATGCTCGGCAAGCCGCGCGAGGCGCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4726268‑4726117 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccACGGCACCCACCAGGGTCACCACCGAAGGTACCAGCCAGGCCATGCCGGCATCACTCAATGGCAGGTGCGCCATGAAGTCTGGCAACACGTGGGCAAGGCTGCTGCCCTTGATC > NC_002947/4726160‑4726273 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |