| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4782055 | 23 (0.730) | 4 (0.130) | 4/236 | NT | 12.5% | coding (5304/7887 nt) | pvdJ | non‑ribosomal peptide synthetase |
| ? | NC_002947 | = 4782115 | 34 (1.130) | coding (5244/7887 nt) | pvdJ | non‑ribosomal peptide synthetase | |||||
ACCACGTCACGGTCGCCGCTGTAGCGTTGCAGTAACAGTGCCCAGGCGCCTTGCACCAGGGTGTTGACCGTCAACTGTGCCGCCTGGGCGCGCTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4781903‑4782055‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgcaAGGTTTCGAGCGGCCGACCGCGCTGCCGTTCGACCGCAGCGCCAGCGCCGAGCACAACCATGCAGCAGTGGCCGATGAGCTGGTGTACCTGACCCGCGAGCAAAGCGCGCAGGTGGCGCAGCGCGCCCAGGCGGCACAGTTGACGG < NC_002947/4782115‑4781970 ACCACGTCACGGTCGCCGCTGTAGCGTTGCAGTAACAGTGCCCAGGCGCCTTGCACCAGGGTGTTGACCGTCAACTGTGCCGCCTGGGCGCGCTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCT > 1:647387/1‑150ACCACGTCACGGTCGCCGCTGTAGCGTTGCAGTAACAGTGCCCAGGCGCCTTGCACCAGGGTGTTGACCGTCAACTGTGCCGCCTGGGCGCGCTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCT > 2:579689/1‑150 CACGTCACGGTCGCCGCTGTAGCGTTGCAGTAACAGTGCCCAGGCGCCTTGCACCAGGGTGTTGACCGTCAACTGTGCCGCCTGGGCGCGCTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGC < 1:599593/150‑1 CACGTCACGGTCGCCGCTGTAGCGTTGCAGTAACAGTGCCCAGGCGCCTTGCACCAGGGTGTTGACCGTCAACTGTGCCGCCTGGGCGCGCTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGC > 2:360467/1‑150 CACGTCACGGTCGCCGCTGTAGCGTTGCAGTAACAGTGCCCAGGCGCCTTGCACCAGGGTGTTGACCGTCAACTGTGCCGCCTGGGCGCGCTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGC > 2:599593/1‑150 GCGCTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCAAGGTTTCGAGCGGCCGACCGCGCTGCCGTTCGACCGCAGCGCCAGCGCCGAGCACAACCATGCAGCAGT < 1:84303/133‑1 GCGCTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCAAGGTTTCGAGCGGCCGACCGCGCTGCCGTTCGACCGCAGCGCCAGCGCCGAGCACAACCATGCAGCAGT > 2:84303/1‑133 TGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCAAGGTTTCGAGCGGCCGACCGCGCTGCCGTTCGACCGCAGCGCCAGCGCCGAGCACAACCATGCA < 1:477994/115‑1 TGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCAAGGTTTCGAGCGGCCGACCGCGCTGCCGTTCGACCGCAGCGCCAGCGCCGAGCACAACCATGCA > 2:477994/1‑115 TGCAAGGTTTCGAGCGGCCGACCGCGCTGCCGTTCGACCGCAGCGCCAGCGCCGAGCACAACCATGCAGCAGTGGCCGATGAGCTGGTGTACCTGACCCGCGAGCAAAGCGCGCAGGTGGCGCAGCGCGCCCAGGCGGCACAGTTGACGG > 1:713872/1‑150 ACCACGTCACGGTCGCCGCTGTAGCGTTGCAGTAACAGTGCCCAGGCGCCTTGCACCAGGGTGTTGACCGTCAACTGTGCCGCCTGGGCGCGCTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4781903‑4782055‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgcaAGGTTTCGAGCGGCCGACCGCGCTGCCGTTCGACCGCAGCGCCAGCGCCGAGCACAACCATGCAGCAGTGGCCGATGAGCTGGTGTACCTGACCCGCGAGCAAAGCGCGCAGGTGGCGCAGCGCGCCCAGGCGGCACAGTTGACGG < NC_002947/4782115‑4781970 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |