New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4782055	23 (0.730)	4 (0.130)	4/236	NT	12.5%	coding (5304/7887 nt)	pvdJ	non‑ribosomal peptide synthetase
	?	NC_002947	= 4782115	34 (1.130)					coding (5244/7887 nt)	pvdJ	non‑ribosomal peptide synthetase

CACGGTCGCCGCTGTAGCGTTGCAGTAACAGTGCCCAGGCGCCTTGCACCAGGGTGTTGACCGTCAACTGTGCCGCCTGGGCGCGCTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCGGTCGAACGGCAGCGCGGTCGGCCGCTCGAAACCTTGCAGCTCATTGCGCCAGAAATCACGCGAAGCCTCACGGTCCCATCGCTGCAGCAAGGCGATGAAGTCGCGGTAGCGCGGCGGCGTC  >  NC_002947/4781910‑4782202                                                                                                                                                  |                                                                                                                                                    cACGGTCGCCGCTGTAGCGTTGCAGTAACAGTGCCCAGGCGCCTTGCACCAGGGTGTTGACCGTCAACTGTGCCGCCTGGGCGCGCTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGt                                                                                                                                                 <  2:647387/150‑1 (MQ=255)  aCGGTCGCCGCTGTAGCGTTGCAGTAACAGTGCCCAGGCGCCTTGCACCAGGGTGTTGACCGTCAACTGTGCCGCCTGGGCGCGCTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGtt                                                                                                                                                <  1:199062/150‑1 (MQ=255)                   gTTGCAGTAACAGTGCCCAGGCGCCTTGCACCAGGGTGTTGACCGTCAACTGTGCCGCCTGGGCGCGCTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCggcgctggcgc                                                                                                                               <  1:403261/150‑1 (MQ=255)                      gCAGTAACAGTGCCCAGGCGCCTTGCACCAGGGTGTTGACCGTCAACTGTGCCGCCTGGGCGCGATGCGCCAAAATAGCTTTTTGCTCGTTGGTTATTTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGC                                                                                                                            <  1:531025‑M1/150‑1 (MQ=255)                       cAGTAACAGTGCCCAGGCGCCTTGCACCAGGGTGTTGACCGTCAACTGTGCCGCCTGGGCGCGCTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCG                                                                                                                           >  2:526560‑M1/1‑150 (MQ=255)                        aGTAACAGTGCCCAGGCGCCTTGCACCAGGGTGTTGACCGTCAACTGTGCCGCCTGGGCGCGCTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCG                                                                                                                           >  2:43714‑M1/1‑149 (MQ=255)                        aGTAACAGTGCCCAGGCGCCTTGCACCAGGGTGTTGACCGTCAACTGTGCCGCCTGGGCGCGCTGCGCCACCTGCGCGCTTTGCTCGCGGGACAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCG                                                                                                                           <  1:43714‑M1/149‑1 (MQ=255)                             cAGTGCCCAGGCGCCTTGCACCAGGGTGTTGACCGTCAACTGTGCCGCCTGGGCGCGCTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCGGTCGaa                                                                                                                     >  1:211545/1‑150 (MQ=255)                              aGTGCCCAGGCGCCTTGCACCAGGGTGTTGACCGTCAACTGTGCCGCCTGGGCGCGCTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGTCGCTGCGGTCGatc                                                                                                                    <  2:249975/150‑3 (MQ=255)                              aGTGCCCAGGCGCCTTGCACCAGGGTGTTGACCGTCAACTGTGCCGCCTGGGCGCGCTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCGGTCGAAc                                                                                                                    <  2:696559/150‑1 (MQ=255)                              aGTGCCCAGGCGCCTTGCACCAGGGTGTTGACCGTCAACTGTGCCGCCTGGGCGCGCTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCGGTCGAAc                                                                                                                    <  2:624088/150‑1 (MQ=255)                                   ccAGGCGCCTTGCACCAGGGTGTTGACCGTCAACTGTGCCGCCTGGGCGCGCTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCGGTCGAACGGCAg                                                                                                               >  1:569539/1‑150 (MQ=255)                                           cTTGCACCAGGGTGTTGACCGTCAACTGTGCCGCCTGGGCGCGCTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCGGTCGAACGGCAGCGCGGTCg                                                                                                       >  2:487873/1‑150 (MQ=255)                                               cACCAGGGTGTTGACCGTCAACTGTGCCGCCTGGGCGCGCTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCGGccgaccgcgctgccgttcgaccg                                                                                                   <  2:806281‑M1/150‑24 (MQ=255)                                                             ccGTCAACTGTGCCGCCTGGGCGCGCTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCGGTCGAACGGCAGCGCGGTCGGCCGCTCGAAACCTtgca                                                                                     >  1:713872‑M2/1‑146 (MQ=255)                                                                tCAACTGTGCCGCCTGGGCGCGCTGCGCCACCTGCGCGCTTTGCTCGNGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCGGTCGAACGGCAGCGAGGTGGGCCGCTCGAAACCTTGCAGCt                                                                                  >  1:340281/1‑150 (MQ=255)                                                                                ggCGCGCTGCGCCACCTGCGCGCCTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCGGTCGAACGGCAGCGCGGTCGGCCGCTCGAAACCTTGCAGCTCATTGCGCCAGAAATc                                                                  >  2:243255/1‑150 (MQ=255)                                                                                  cgcgcTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCGGTCGAACGGCAGCGCGGTCGGCCGCTCGAAACCTTGCAGCTCATTGCGCCAGAAATCAc                                                                <  1:360467/150‑1 (MQ=255)                                                                                   gcgcTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCAaggtttcgagcggccgaccgcgctgccgttcgaccgcagcgccagcgccgagcacaaccatgcagcagt                                                                                >  2:84303‑M1/1‑64 (MQ=255)                                                                                   gcgcTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCAaggtttcgagcggccgaccgcgctgccgttcgaccgcagcgccagcgccgagcacaaccatgcagcagt                                                                                <  1:84303‑M1/133‑70 (MQ=255)                                                                                   gcgcTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCGGTCGAACGGCAGCGCGGTCGGCCGCTCGAAACCTTGCAGCTCATTGCGCCAGAAATCAcg                                                               >  2:803581/1‑150 (MQ=255)                                                                                      cTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCGGTCGaa                                                                                                                     <  1:589874/93‑1 (MQ=255)                                                                                      cTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCGGTCGaa                                                                                                                     >  2:589874/1‑93 (MQ=255)                                                                                                tGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCAaggtttcgagcggccgaccgcgctgccgttcgaccgcagcgccagcgccgagcacaaccatgca                                                                                     <  1:477994‑M1/115‑65 (MQ=255)                                                                                                tGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCAaggtttcgagcggccgaccgcgctgccgttcgaccgcagcgccagcgccgagcacaaccatgca                                                                                     >  2:477994‑M1/1‑51 (MQ=255)                                                                                                  cgctcTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCGGTCGAACGGCAGCGCGGTCGGCCGCTCGAAACCTTGCAGCTCATTGCGCCAGAAATCACGCGAAGCCTCACGGTc                                                <  2:418524/150‑1 (MQ=255)                                                                                                            tCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCGGccgaccgcgctgccgttcgacc                                                                                                    >  2:353100‑M1/1‑66 (MQ=255)                                                                                                            tCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCGGccgaccgcgctgccgttcgacc                                                                                                    <  1:353100‑M1/88‑23 (MQ=255)                                                                                                            tCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCGGTCGAACGGCAGCGCGGTCGGCCGCTCGAAACCTTGCAGCTCATTGCGCCAGAAATCACGCGAAGCCTCACGGTCCCATCGCTgc                                      >  2:414264/1‑150 (MQ=255)                                                                                                                       gTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCGGTCGAACGGCAGCGCGGTCGGCCGCTCGAAACCTTGCAGCTCATTGCGCCAGAAATCACGCGAAGCCTCACGGTCCCATCGCTGCAGCAAGGCGAt                           <  1:770667/150‑1 (MQ=255)                                                                                                                       gTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCGGTCGAACGGCAGCGCGGTCGGCCGCTCGAAACCTTGCAGCTCATTGCGCCAGAAATCACGCGAAGCCTCACGGTCCCATCGCTGCAGCAAGGCGAt                           <  1:243255/150‑1 (MQ=255)                                                                                                                           acCAGCTCATCGGCCACTGCTGCACGGTTGTGCTCGGCGCTGGCGCTGCGGTCGAACGGCAGCGCGGTCGGCCGCTCGAAACCTTGCAGCTCATTGCGCCAGAAATCACGCGAAGCCTCACGGTCCCATCGCTGCAGCAAGGCGATGAAg                       >  1:69376/1‑150 (MQ=255)                                                                                                                                       gCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCGGTCGAACGGCAGCGCGGTCGGCCGCTCGAAACCTTGCAGCTCATTGCGCCAGAAATCACGCGAAGCCTCACGGTCCCATCGCTGCAGCAAGGCGATGAAGTCGCGGTAgcgc           >  2:561942/1‑150 (MQ=255)                                                                                                                                        ccACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCGGTCGAACGGCAGCGCGGTCGGCCGCTCGAAACCTTGCAGCTCATTGCGCCAGAAATCACGCGAAGCCTCACGGTCCCATCGCTGCAGCAAGGCGATGAAGTCGCGGTAGcgcg          >  2:648007/1‑150 (MQ=255)                                                                                                                                        ccACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCGGTCGAACGGCAGCGCGGTCGGCCGCTCGAAACCTTGCAGCTCATTGCGCCAGAAATCACGCGAAGCCTCACGGTCCCATCGCTGCAGCAAGGCGATGAAGTCGCGGTAGcgcg          >  1:720045/1‑150 (MQ=255)                                                                                                                                          aCTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCGGTCGAACGGCAGCGCGGTCGGCCGCTCGAAACCTtgcagcagtggccgatgagctggtgtacctgacccgcgagcaaagcgcgcaggtggcgcagcgc                         >  2:84303‑M2/1‑69 (MQ=255)                                                                                                                                          aCTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCGGTCGAACGGCAGCGCGGTCGGCCGCTCGAAACCTtgcagcagtggccgatgagctggtgtacctgacccgcgagcaaagcgcgcaggtggcgcagcgc                         <  1:84303‑M2/133‑65 (MQ=255)                                                                                                                                          aCTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCGGTCGAACGGCAGCGCGGTCGGCCGCTCGAAACCTTGCAGCTCATTGCGCCAGAAATCACGCGAAGCCTCACGGTCCCATCGCTGCAGCAAGGCGATGAAGTCGCGGTAGCgcggc        <  2:720045/150‑1 (MQ=255)                                                                                                                                             gctgcATGGTTGTGCTCGGCGCTGGCGCTGCGGTCGAACGGCAGCGCGGTCGGCCGCTCGAAACCTTGCAGCTCATTGCGCCAGAAATCACGCGAAGCCTCACGGTCCCATCGCTGCAGCAAGGCGATGAAGTCGCGGTAGCgcggcggc     <  1:579689/150‑1 (MQ=255)                                                                                                                                               tgcAaggtttcgagcggccgaccgcgctgccgttcgaccgcagcgccagcgccgagcacaaccatgcagcagtggccgatgagctggtgtacctgacccgcgagcaaagcgcgcaggtggcgcagcgcgcccaggcggcacagttgacgg   >  1:713872‑M1/1‑4 (MQ=255)                                                                                                                                               tgcATGGTTGTGCTCGGCGCTGGCGCTGCGGccgaccgcgctgccgttcga                                                                                                      >  2:46996‑M1/1‑31 (MQ=255)                                                                                                                                               tgcATGGTTGTGCTCGGCGCTGGCGCTGCGGccgaccgcgctgccgttcga                                                                                                      <  1:46996‑M1/51‑21 (MQ=255)                                                                                                                                               tgcATGGTTGTGCTCGGCGCTGGCGCTGCGGTCGAACGGCAGCGCGGTCGGCCGCTCGAAACCTtgcagcagtggccgatgagctggtgtacctgacccgcgagcaaagcgcgca                                      >  2:477994‑M2/1‑64 (MQ=255)                                                                                                                                               tgcATGGTTGTGCTCGGCGCTGGCGCTGCGGTCGAACGGCAGCGCGGTCGGCCGCTCGAAACCTtgcagcagtggccgatgagctggtgtacctgacccgcgagcaaagcgcgca                                      <  1:477994‑M2/115‑52 (MQ=255)                                                                                                                                               tgcATGGTTGTGCTCGGCGCTGGCGCTGCGGTCGAACGGCAGCGCGGTCGGCCGCTCGAAACCTTGCAGCTCATTGCGCCAGAAATCACGCGAAGCCTCACGGTCCCATCGCTGCAGCAAGGCGATGAAGTCGCGGTAGCGCGGCGGCGt   >  1:776420/1‑150 (MQ=255)                                                                                                                                                gcATGGTTGTGCTCGGCGCTGGCGCTGCGGTCGAACGGCAGCGCGGTCGGCCGCTCGAAACCTTGCAGCTCATTGCGCCAGAAATCACGCGAAGCCTCACGGTCCCATCGCTGCAGCAAGGCGATGAAGTCGCGGTAGCGCGGCGGCGTc  <  1:803581/150‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                    CACGGTCGCCGCTGTAGCGTTGCAGTAACAGTGCCCAGGCGCCTTGCACCAGGGTGTTGACCGTCAACTGTGCCGCCTGGGCGCGCTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCGGTCGAACGGCAGCGCGGTCGGCCGCTCGAAACCTTGCAGCTCATTGCGCCAGAAATCACGCGAAGCCTCACGGTCCCATCGCTGCAGCAAGGCGATGAAGTCGCGGTAGCGCGGCGGCGTC  >  NC_002947/4781910‑4782202

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.