New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4782082	25 (0.790)	5 (0.160)	5/240	NT	16.3%	coding (5277/7887 nt)	pvdJ	non‑ribosomal peptide synthetase
	?	NC_002947	= 4782102	27 (0.880)					coding (5257/7887 nt)	pvdJ	non‑ribosomal peptide synthetase

GCAGTAACAGTGCCCAGGCGCCTTGCACCAGGGTGTTGACCGTCAACTGTGCCGCCTGGGCGCGCTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4781931‑4782082 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggCCGACCGCGCTGCCGTTCGACCG  <  NC_002947/4782102‑4782080                                                                                                                                                                                 GCAGTAACAGTGCCCAGGCGCCTTGCACCAGGGTGTTGACCGTCAACTGTGCCGCCTGGGCGCGATGCGCCAAAATAGCTTTTTGCTCGTTGGTTATTTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGC                           <  1:531025/150‑1  CAGTAACAGTGCCCAGGCGCCTTGCACCAGGGTGTTGACCGTCAACTGTGCCGCCTGGGCGCGCTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCG                          >  2:526560/1‑150   AGTAACAGTGCCCAGGCGCCTTGCACCAGGGTGTTGACCGTCAACTGTGCCGCCTGGGCGCGCTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCG                          >  2:43714/1‑149   AGTAACAGTGCCCAGGCGCCTTGCACCAGGGTGTTGACCGTCAACTGTGCCGCCTGGGCGCGCTGCGCCACCTGCGCGCTTTGCTCGCGGGACAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCG                          <  1:43714/149‑1                          CACCAGGGTGTTGACCGTCAACTGTGCCGCCTGGGCGCGCTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCGGCCGACCGCGCTGCCGTTCGACCG  <  2:806281/150‑1                                                                                       TCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCGGCCGACCGCGCTGCCGTTCGACC   <  1:353100/88‑1                                                                                       TCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCGGCCGACCGCGCTGCCGTTCGACC   >  2:353100/1‑88                                                                                                                          TGCATGGTTGTGCTCGGCGCTGGCGCTGCGGCCGACCGCGCTGCCGTTCGA     <  1:46996/51‑1                                                                                                                          TGCATGGTTGTGCTCGGCGCTGGCGCTGCGGCCGACCGCGCTGCCGTTCGA     >  2:46996/1‑51                                                                                                                                                                                 GCAGTAACAGTGCCCAGGCGCCTTGCACCAGGGTGTTGACCGTCAACTGTGCCGCCTGGGCGCGCTGCGCCACCTGCGCGCTTTGCTCGCGGGTCAGGTACACCAGCTCATCGGCCACTGCTGCATGGTTGTGCTCGGCGCTGGCGCTGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4781931‑4782082 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggCCGACCGCGCTGCCGTTCGACCG  <  NC_002947/4782102‑4782080

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.