| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4803082 | 31 (0.980) | 5 (0.170) | 5/234 | NT | 13.3% | coding (277/972 nt) | PP_4231 | xanthine dehydrogenase accessory factor |
| ? | NC_002947 | = 4803104 | 36 (1.200) | coding (255/972 nt) | PP_4231 | xanthine dehydrogenase accessory factor | |||||
ATCGAGCAGCTGGCGGGTACCCGTAGGCAGGCTCACCTCACGCAGTACCCGGCGCTGGCCCAGCAGCGCACGTTCCAACTCACGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4802927‑4803082‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggcagCGACCCGCGTTCGCGCGTTCGCCTGCCGTGTGGCGGTGTGCTGGAAGTGCTGGTGGAGAACCTGCCGGTTGAATGTGAGGTGCAGGCGCATCTGCGTGAGTTGGAACGTGCGCTGCTGGGCCAGCGCCGGGTACTGCGTGAGGT < NC_002947/4803104‑4802961 ATCGAGCAGCTGGCGGGTACCCGTAGGCAGGCTCACCTCACGCAGTACCCGGCGCTGGCCCAGCAGCGCACGTTCCAACTCACGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACA < 1:115775/150‑1 CCGTAGGCAGGCTCACCTCACGCAGTACCCGGCGCTGGCCCAGCAGCGCACGTTCCAACTCACGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGCGACCCGCGTTCGC > 2:181579/1‑150 TCACCTCACGCAGTACCCGGCGCTGGCCCAGCAGCGCACGTTCCAACTCACGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGCGACCCGCGTTCGCGCGTTCGCCTGC < 1:181579/150‑1 CGCAGTACCCGGCGCTGGCCCAGCAGCGCACGTTCCAACTCACGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGCGACCCGCGTTCGCGCGTTCGCCTGCCGTGTGGC < 2:37846/150‑1 AACTCACGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGCGACCCGCGTTCGCGCGTTCGCCTGCCGTGT < 1:735033/111‑1 AACTCACGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGCGACCCGCGTTCGCGCGTTCGCCTGCCGTGT > 2:735033/1‑111 CGGCAGCGACCCGCGTTCGCGCGTTCGCCTGCCGTGTGGCGGTGTGCTGGAAGTGCTGGTGGAGAACCTGCCGGTTGAATGTGAGGTGCAGGCGCATCTGCGTGAGTTGGAACGTGCGCTGCTGGGCCAGCGCCGGGTACTGCGTGAGGT < 1:515369/150‑1 CAGCGACCCGCGTTCGCGCGTTCGCCTGCCGTGTGGCGGTGTGCTGGAAGTGCTGGTGGAGAACCTGCCGGTTGAATGTGAGGTGCAGGCGCATCTGCGTGAGTTGG < 1:600056/107‑1 CAGCGACCCGCGTTCGCGCGTTCGCCTGCCGTGTGGCGGTGTGCTGGAAGTGCTGGTGGAGAACCTGCCGGTTGAATGTGAGGTGCAGGCGCATCTGCGTGAGTTGG > 2:600056/1‑107 AGCGACCCGCGTTCGCGCGTTCGCCTGCCGTGTGGCGGTGTGCTGGAAGTGCTGGTGGAGAACCTGCCGGTTGAATGTGAGGTGCAGGCGCATC < 1:810054/94‑1 AGCGACCCGCGTTCGCGCGTTCGCCTGCCGTGTGGCGGTGTGCTGGAAGTGCTGGTGGAGAACCTGCCGGTTGAATGTGAGGTGCAGGCGCATC > 2:810054/1‑94 ATCGAGCAGCTGGCGGGTACCCGTAGGCAGGCTCACCTCACGCAGTACCCGGCGCTGGCCCAGCAGCGCACGTTCCAACTCACGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4802927‑4803082‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggcagCGACCCGCGTTCGCGCGTTCGCCTGCCGTGTGGCGGTGTGCTGGAAGTGCTGGTGGAGAACCTGCCGGTTGAATGTGAGGTGCAGGCGCATCTGCGTGAGTTGGAACGTGCGCTGCTGGGCCAGCGCCGGGTACTGCGTGAGGT < NC_002947/4803104‑4802961 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |