New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4803082	31 (0.980)	5 (0.170)	5/234	NT	13.3%	coding (277/972 nt)	PP_4231	xanthine dehydrogenase accessory factor
	?	NC_002947	= 4803104	36 (1.200)					coding (255/972 nt)	PP_4231	xanthine dehydrogenase accessory factor

CGGGTACCCGTAGGCAGGCTCACCTCACGCAGTACCCGGCGCTGGCCCAGCAGCGCACGTTCCAACTCACGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGGCGAACGCGCGAACGCGGGTCGCTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACC  >  NC_002947/4802940‑4803230                                                                                                                                               |                                                                                                                                                     cGGGTACCCGTAGGCAGGCTCACCTCACGCAGTACCCGGCGCTGGCCCAGCAGCGCACGTTCCAACTCACGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGgcgaacg                                                                                                                                               <  1:807591/150‑1 (MQ=255)   ggTACCCGTAGGCAGGCTCACCTCACGCAGTACCCGGCGCTGGCCCAGCAGCGCACGTTCCAACTCACGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGgcgaacgcg                                                                                                                                             <  2:521894/150‑1 (MQ=255)        ccGTAGGCAGGCTCACCTCACGCAGTACCCGGCGCTGGCCCAGCAGCGCACGTTCCAACTCACGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGgcgaacgcgcgaac                                                                                                                                        <  1:541646/150‑1 (MQ=255)        ccGTAGGCAGGCTCACCTCACGCAGTACCCGGCGCTGGCCCAGCAGCGCACGTTCCAACTCACGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGcgacccgcgttcgc                                                                                                                                        >  2:181579‑M1/1‑136 (MQ=255)                    tcacctcacGCAGTACCCGGCGCTGGCCCAGCAGCGCACGTTCCAACTCACGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGcgacccgcgttcgcgcgttcgcctgc                                                                                                                            <  1:181579‑M1/150‑27 (MQ=255)                      acctcacGCAGTACCCGGCGCTGGCCCAGCAGCGCACGTTCCAACTCACGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGGCGAACGCGCGAACGCGGGTCGctgccg                                                                                                                          <  1:515369‑M2/150‑7 (MQ=255)                            cGCAGTACCCGGCGCTGGCCCAGCAGCGCACGTTCCAACTCACGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGcgacccgcgttcgcgcgttcgcctgccgtgtggc                                                                                                                    <  2:37846‑M1/150‑35 (MQ=255)                                      ggCGCTGGCCCAGCAGCGCACGTTCCAACTCACGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGGCGAACGCGCGAACGCGGGTCGCTGCCGTCGCCATAACGCACGa                                                                                                          >  2:327282/1‑150 (MQ=255)                                        cgcTGGCCCAGCAGCGCACGTTCCAACTCACGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGGCGAACGCGCGAACGCGGGTCGCTGCCGTCGCCATAACGCACGATg                                                                                                        <  1:370228/150‑1 (MQ=255)                                            ggCCCAGCAGCGCACGTTCCAACTCACGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGGCGAACGCGCGAACGCGGGTCGCTGCCGTCGCCATAACGCACGATGGCaa                                                                                                    <  1:3808/150‑1 (MQ=255)                                             gCCCAGCAGCGCACGTTCCAACTCACGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGGCGAACGCGCGAACGCGGGTCGCTGCCGTCGCCATAACGCACGATg                                                                                                        <  1:11092/145‑1 (MQ=255)                                             gCCCAGCAGCGCACGTTCCAACTCACGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGGCGAACGCGCGAACGCGGGTCGCTGCCGTCGCCATAACGCACGATg                                                                                                        >  2:11092/1‑145 (MQ=255)                                                       gcACGTTCCAACTCACGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGGCGAACGCGCGAACGCGGGTCGCTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCggg                                                                                         >  1:432051/1‑150 (MQ=255)                                                       gcACGTTCCAACTCACGCAGATGCACCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGGCGAACGCGCGAACGCGGGTCGCTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCggg                                                                                         >  2:127340/1‑150 (MQ=255)                                                              ccAACTCACGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGGCGAACGCGCGAACGCGGGTCGctg                                                                                                                             >  2:600056‑M2/1‑104 (MQ=255)                                                              ccAACTCACGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGGCGAACGCGCGAACGCGGGTCGctg                                                                                                                             <  1:600056‑M2/107‑4 (MQ=255)                                                                aaCTCACGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGcgacccgcgttcgcgcgttcgcctgccgtgt                                                                                                                       >  2:735033‑M1/1‑80 (MQ=255)                                                                aaCTCACGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGcgacccgcgttcgcgcgttcgcctgccgtgt                                                                                                                       <  1:735033‑M1/111‑32 (MQ=255)                                                                aaCTCACGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGGCGAACGCGCGAACGCGGGTCGCTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTGCCCg                                                                                >  1:128712/1‑150 (MQ=255)                                                                 aCTCACGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGGCGAACGCGCGAACGCGGGTCGCTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGa                                                                               <  1:375530/150‑1 (MQ=255)                                                                     aCGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGGCGAACGCGCGAACGCGGGTCGCTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCGGGACTTCCCCGAgacc                                                                           >  2:520063/1‑147 (MQ=255)                                                                      cGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGGCGAACGCGCGAACGCGGGTCGCTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGcc                                                                          <  2:193315/150‑1 (MQ=255)                                                                       gCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGGCGAACGCGCGAACGCGGGTCGCTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCa                                                                         >  2:75944/1‑150 (MQ=255)                                                                          gATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGGCGAACGCGCGAACGCGGGTCGct                                                                                                                              <  1:810054‑M2/94‑3 (MQ=255)                                                                          gATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGGCGAACGCGCGAACGCGGGTCGct                                                                                                                              >  2:810054‑M2/1‑92 (MQ=255)                                                                                  tGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGGCGAACGCGCGAACGCGGGTCGCTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTCCgaga                                                              >  2:217131/1‑150 (MQ=255)                                                                                         cacaTTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGGCGAACGCGCGAACGCGGGTCGCTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGa                                                                               <  2:209535/126‑1 (MQ=255)                                                                                         cacaTTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGGCGAACGCGCGAACGCGGGTCGCTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGa                                                                               >  1:209535/1‑126 (MQ=255)                                                                                         cacaTTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGGCGAACGCGCGAACGCGGGTCGCTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAgtcgt                                                       <  1:554850/150‑1 (MQ=255)                                                                                          acaTTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGGCGAACGCGCGAACGCGGGTCGCTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAgtcgtc                                                      >  1:89613/1‑150 (MQ=255)                                                                                           caTTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGGCGAACGCGCGAACGCGGGTCGCTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCt                                                     <  1:288938/150‑1 (MQ=255)                                                                                             ttCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGGCGAACGCGCGAACGCGGGTCGCTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTc                                                   <  2:515369/150‑1 (MQ=255)                                                                                                aaCCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGGCGAACGCGCGAACGCGGGTCGCTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGac                                                >  1:216678/1‑150 (MQ=255)                                                                                                        ggTTCTCCACCAGCACTTCCAGCACACCGCCACACTGCAGGCGAACGCGCGAACGCGGGTCGCTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCAc                                        <  1:520063/150‑1 (MQ=255)                                                                                                             tcCACCAGCACTTCCAGCACACCGCCACACGGCAGGCGAACGCGCGAACGCGGGTCGCTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGAc                                   <  1:75944/150‑1 (MQ=255)                                                                                                                accaGCACTTCCAGCACACCGCCACACGGCAGGCGAACGCGCGAACGCGGGTCGCTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGAAACAGCCCCCGGACAga                                >  2:732547/1‑149 (MQ=255)                                                                                                                     cACTTCCAGCACACCGCCACACGGCAGGCGAACGCGCGAACGCGGGTCGCTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGcc                           <  2:89613/150‑1 (MQ=255)                                                                                                                                   cGCCACACGGCAGGCGAACGCGCGAACGCGGGTCGCTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGAcaca                                             <  2:255269/118‑1 (MQ=255)                                                                                                                                   cGCCACACGGCAGGCGAACGCGCGAACGCGGGTCGCTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGAcaca                                             >  1:255269/1‑118 (MQ=255)                                                                                                                                   cGCCACACGGCAGGCGAACGCGCGAACGCGGGTCGCTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGc             >  2:719295/1‑150 (MQ=255)                                                                                                                                    gCCACACGGCAGGCGAACGCGCGAACGCGGGTCGctgccgtgtggcggtgtgctggaagtgctggtggagaacctgccggttgaatgtgaggtgcaggcgcatctgcgtgagttggaacgtgcgctgctgggccagcgccgggtactgcg            <  2:37846‑M2/150‑117 (MQ=255)                                                                                                                                      cacaCGGCAGGCGAACGCGCGAACGCGGGTCGCTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCTGCTgg          >  2:431956/1‑150 (MQ=255)                                                                                                                                       acacGGCAGGCGAACGCGCGAACGCGGGTCGctgccgtgtggcggtgtgctggaagtgctggtggagaacctgccggttgaatgtgaggtgcaggcgcatctgcgtgagtt                                                >  2:735033‑M2/1‑31 (MQ=255)                                                                                                                                       acacGGCAGGCGAACGCGCGAACGCGGGTCGctgccgtgtggcggtgtgctggaagtgctggtggagaacctgccggttgaatgtgaggtgcaggcgcatctgcgtgagtt                                                <  1:735033‑M2/111‑81 (MQ=255)                                                                                                                                          cGGCAGcgacccgcgttcgcgcgttcgcctgccgtgtggcggtgtgctggaagtgctggtggagaacctgccggttgaatgtgaggtgcaggcgcatctgcgtgagttggaacgtgcgctgctgggccagcgccgggtactgcgtgaggt      <  1:515369‑M1/150‑145 (MQ=255)                                                                                                                                            gCAGGCGAACGCGCGAACGCGGGTCGctgccgtgtggcggtgtgctggaagtgctggtggagaacctgccggttgaatgtgaggtgcaggcgcatctgcgtgagttggaacgtgcgctgctgggccagcgccgggtactgcgtgaggtga    <  1:181579‑M2/150‑125 (MQ=255)                                                                                                                                             cAGcgacccgcgttcgcgcgttcgcctgccgtgtggcggtgtgctggaagtgctggtggagaacctgccggttgaatgtgaggtgcaggcgcatctgcgtgagttgg                                              <  1:600056‑M1/107‑105 (MQ=255)                                                                                                                                             cAGcgacccgcgttcgcgcgttcgcctgccgtgtggcggtgtgctggaagtgctggtggagaacctgccggttgaatgtgaggtgcaggcgcatctgcgtgagttgg                                              >  2:600056‑M1/1‑3 (MQ=255)                                                                                                                                             cAGGCGAACGCGCGAACGCGGGTCGCTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCAc   <  1:732547/150‑1 (MQ=255)                                                                                                                                              aGcgacccgcgttcgcgcgttcgcctgccgtgtggcggtgtgctggaagtgctggtggagaacctgccggttgaatgtgaggtgcaggcgcatc                                                          >  2:810054‑M1/1‑2 (MQ=255)                                                                                                                                              aGcgacccgcgttcgcgcgttcgcctgccgtgtggcggtgtgctggaagtgctggtggagaacctgccggttgaatgtgaggtgcaggcgcatc                                                          <  1:810054‑M1/94‑93 (MQ=255)                                                                                                                                              aGGCGAACGCGCGAACGCGGGTCGCTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCAcc  >  2:71003/1‑150 (MQ=255)                                                                                                                                               |                                                                                                                                                     CGGGTACCCGTAGGCAGGCTCACCTCACGCAGTACCCGGCGCTGGCCCAGCAGCGCACGTTCCAACTCACGCAGATGCGCCTGCACCTCACATTCAACCGGCAGGTTCTCCACCAGCACTTCCAGCACACCGCCACACGGCAGGCGAACGCGCGAACGCGGGTCGCTGCCGTCGCCATAACGCACGATGGCAACCGGCTCCGGGAATTCCCCGAGGGCCACGCGTTCGAGAAAGTCGTCTTCGACACAGCCACCGGACAGCGAGCCCAGCCACTGGCCGCTGGCGTTCACC  >  NC_002947/4802940‑4803230

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.