| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5210282 | 27 (0.850) | 4 (0.150) | 4/216 | NT | 11.3% | intergenic (‑100/+78) | rnd/PP_4592 | ribonuclease D/metal dependent hydrolase |
| ? | NC_002947 | = 5210341 | 39 (1.410) | intergenic (‑159/+19) | rnd/PP_4592 | ribonuclease D/metal dependent hydrolase | |||||
TCGCGGCAGTGTTCGGCCAGGCTCTGGTCGTCACGGATCCAGTGAATTTCGATGGCCACAAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5210124‑5210282‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccctgtgggagcgggcACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGCGCCCGCTCCCACAGGGTGGACTGCCCCCGAAAAGCGGGACAGTTTCACCCGCAGTGCCCGCGCCGTATATACTGCGCGCCAATGTTA < NC_002947/5210341‑5210196 TCGCGGCAGTGTTCGGCCAGGCTCTGGTCGTCACGGATCCAGTGAATTTCGATGGCCACAAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTG > 2:556312/1‑150 GTGTTCGGCCAGGCTCTGGTCGTCACGGATCCAGTGAATTTCGATGGCCACAAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGG < 2:650870/150‑1 TCTGGTCGTCACGGATCCAGTGAATTTCGATGGCCACAAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCACGCCCGCGAACC > 1:153914/1‑150 tcgCCCACTAACATGGGCGCGCAGTAGATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGG < 2:153914/147‑1 ACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGCGC > 1:648588/1‑150 ATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGCGCCCGCTCCCACAGGGTGGAC < 2:648588/150‑1 CCCTGTGGGAGCGGGCGCGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTC < 1:155779/63‑1 CCCTGTGGGAGCGGGCGCGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTC > 2:155779/1‑63 CTGTGGGAGCGGGCACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGCGCCCGCTCCCACAGGGTGGACTGCCCCCGAAAAGCGGGACAGTTTCACCCGCAGTGCCCGCGCCGTATATACTGCGC > 2:28765/1‑150 GCGGGCACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGCGCCCGCTCCCACAGGGTGGACTGCCCCCGAAAAGCGGGACAGTTTCACCCGCAGTGCCCGCGCCGTATATACTGCGCGCCAATGT > 1:617049/1‑150 GGGCACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGCGCCCGCTCCCACAGGGTGGACTGCCCCCGAAAAGCGGGACAGTTTCACCCGCAGTGCCCGCGCCGTATATACTGCGCGCCAATGTTA < 2:103582/150‑1 TCGCGGCAGTGTTCGGCCAGGCTCTGGTCGTCACGGATCCAGTGAATTTCGATGGCCACAAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5210124‑5210282‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccctgtgggagcgggcACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGCGCCCGCTCCCACAGGGTGGACTGCCCCCGAAAAGCGGGACAGTTTCACCCGCAGTGCCCGCGCCGTATATACTGCGCGCCAATGTTA < NC_002947/5210341‑5210196 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |