| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5210282 | 27 (0.850) | 4 (0.150) | 4/216 | NT | 11.3% | intergenic (‑100/+78) | rnd/PP_4592 | ribonuclease D/metal dependent hydrolase |
| ? | NC_002947 | = 5210341 | 39 (1.410) | intergenic (‑159/+19) | rnd/PP_4592 | ribonuclease D/metal dependent hydrolase | |||||
TTCGGCCAGGCTCTGGTCGTCACGGATCCAGTGAATTTCGATGGCCACAAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTAT > NC_002947/5210135‑5210430 | ttCGGCCAGGCTCTGGTCGTCACGGATCCAGTGAATTTCGATGGCCACAAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGgcgc > 2:696335/1‑150 (MQ=255)ttCGGCCAGGCTCTGGTCGTCACGGATCCAGTGAATTTCGATGGCCACAAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGgcgc < 1:424530/150‑1 (MQ=255)ttCGGCCAGGCTCTGGTCGTCACGGATCCAGTGAATTTCGATGGCCACAAGGCTCTCCCACTAACATTGGCGCGCAGCATACACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGgcgc > 1:831408/1‑150 (MQ=255) tctGGTCGTCACGGATCCAGTGAATTTCGATGGCCACAAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCacgcccgcgaacc > 1:153914‑M1/1‑137 (MQ=255) tcgtcACGGATCCAGTGAATTTCGATGGCCACAAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGACCGGGCGCGCCCGCGAATGAAGGc > 2:87010/1‑150 (MQ=255) cAGTGAATTTCGATGGCCACAAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTAt < 2:644677/150‑1 (MQ=255) gTGAATTTCGATGGCCACAAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATgg > 1:70504/1‑150 (MQ=255) tGAATTTCGATGGCCACAAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGc < 2:745063/150‑1 (MQ=255) tttCGATGGCCACAAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCgg < 2:70504/150‑1 (MQ=255) ggCCACAAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGcc > 2:578991/1‑150 (MQ=255) ccACAAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCg > 2:358658/1‑150 (MQ=255) caAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCgggc < 1:358658/150‑2 (MQ=255) tcgcccactAACATGGGCGCGCAGTAGATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCacgcccgcgaacccgggcaaacccgggccatacaccgtgttgccttcattcgcgg < 2:153914‑M1/147‑56 (MQ=255) ccACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGt > 2:617049/1‑150 (MQ=255) aCTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCacgcccgcgaacccgggcaaacccgggccatacaccgtgttgccttcattcgcgggcgcgc > 1:648588‑M1/1‑89 (MQ=255) tAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTgccc < 2:103582‑M2/150‑5 (MQ=255) aCATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTgcccgc > 1:617049‑M2/1‑144 (MQ=255) gcgcAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTgcccgctcccacag > 2:28765‑M2/1‑136 (MQ=255) atataCGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCacgcccgcgaacccgggcaaacccgggccatacaccgtgttgccttcattcgcgggcgcgcccgctcccacagggtggac < 2:648588‑M1/150‑81 (MQ=255) agatggCGCGGGCACTGCGGTTGAAACTGTCCCGCTTTTTGGGGGCAGTCACCACGTTGGGAGTGGTCGCTCCCCGGAATGAAGGCAACACGGTCTATGGCACGGGTTTGCCCGGCTTCGCGAGCGTGCCCGATCCCATAGGGCTTCAgc < 2:848131/146‑1 (MQ=255) cGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCt < 1:556312/150‑1 (MQ=255) cACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCgcca < 1:696335/150‑1 (MQ=255) tGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCgccagcc > 1:368321/1‑150 (MQ=255) gggTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAg < 1:103582/150‑1 (MQ=255) aaaCTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGccgg > 2:51402/1‑150 (MQ=255) aaCTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGccg > 2:539141/1‑148 (MQ=255) aaCTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGccg < 1:539141/148‑1 (MQ=255) tGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGc > 2:209661/1‑98 (MQ=255) tGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGc < 1:209661/98‑1 (MQ=255) gCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGccggcaaccggcaa < 1:578991/150‑1 (MQ=255) ggggCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTcc > 2:771086/1‑150 (MQ=255) gTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTgcccgctcccacagggtggactgcccccgaaaagcgggacagtttcacccgcagtgcccgcgccgtatat < 2:648588‑M2/150‑71 (MQ=255) tCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAg > 2:15188/1‑145 (MQ=255) tCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAg < 1:15188/145‑1 (MQ=255) cACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGccggcaaccg < 2:581545/129‑1 (MQ=255) cACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGccggcaaccg > 1:581545/1‑129 (MQ=255) aCCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGActgct > 2:381183/1‑150 (MQ=255) cccTGTGGGAGCGGGCgcgcccgcgaacccgggcaaacccgggccatacaccgtgttgccttc > 2:155779‑M1/1‑16 (MQ=255) cccTGTGGGAGCGGGCgcgcccgcgaacccgggcaaacccgggccatacaccgtgttgccttc < 1:155779‑M1/63‑48 (MQ=255) cTGTGGGAGCGGGCacgcccgcgaacccgggcaaacccgggccatacaccgtgttgccttcattcgcgggcgcgcccgctcccacagggtggactgcccccgaaaagcgggacagtttcacccgcagtgcccgcgccgtatatactgcgc > 2:28765‑M1/1‑14 (MQ=255) tgtgGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTa < 1:51402/150‑1 (MQ=255) gCGGGCacgcccgcgaacccgggcaaacccgggccatacaccgtgttgccttcattcgcgggcgcgcccgctcccacagggtggactgcccccgaaaagcgggacagtttcacccgcagtgcccgcgccgtatatactgcgcgccaatgt > 1:617049‑M1/1‑6 (MQ=255) gggCacgcccgcgaacccgggcaaacccgggccatacaccgtgttgccttcattcgcgggcgcgcccgctcccacagggtggactgcccccgaaaagcgggacagtttcacccgcagtgcccgcgccgtatatactgcgcgccaatgtta < 2:103582‑M1/150‑147 (MQ=255) gcgcgcgcCCGGGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGAGTGACCGCTCCCACAGGGCTTCGGCGCTTGGCGGCCAGCCAAGGCCGGCAACCGGGAAACATGTCCAGCGACTGCTGGTAGAGCTCGGt < 1:771086/148‑1 (MQ=255) ggCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTa < 2:831408/150‑1 (MQ=255) gcgcgcCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTgcccgctcccacagggtggactgcccccgaaaagcgggacagtttcacccgcagtgcccgcgccgtatatactgcgcgccaatgttagt > 1:648588‑M2/1‑61 (MQ=255) | TTCGGCCAGGCTCTGGTCGTCACGGATCCAGTGAATTTCGATGGCCACAAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCGCGCCCGCGAATGAAGGCAACACGGTGTATGGCCCGGGTTTGCCCGGGTTCGCGGGCGTGCCCGCTCCCACAGGGCTTCAGCGCTTGGCCGCCAGCCAAGGCCGGCAACCGGCAAACATGTCCAGCGACTGCTGGTAGAGCTCGGTAT > NC_002947/5210135‑5210430 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |