New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5235995	52 (1.640)	4 (0.130)	4/238	NT	7.7%	coding (1281/2325 nt)	fecA	outer membrane ferric citrate porin
	?	NC_002947	= 5236067	46 (1.510)					coding (1353/2325 nt)	fecA	outer membrane ferric citrate porin

GCCACGCGAGTACTGGGTGCGCGGCATCGAAACCCGCTTCTCGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5235950‑5235995 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcagTTCGTGGCCGGCTTCGTTGACGTAGCGGTAGCCGATGCCCAGCTCGTGCCAGCTGTCACCCAGGGCCACGCCCTGCGAGAAGCGGGTTTCGATGCCGCGCACCCAGTACTCGCGTGGCGACAGCGAGACGAAGCTGCCTTGGTCCAG  <  NC_002947/5236067‑5235921                                                                                                                                                                                                   GCCACGCGAGTACTGGGTGCGCGGCATCGAAACCCGCTTCTCGCAGTTCGTGGCCGGCTTCGTTGACGTAGCGGTAGCCGATGCCCAGCTCGTGCCAGCTGTCACCCAGG                                                                                     <  1:125695/110‑1 GCCACGCGAGTACTGGGTGCGCGGCATCGAAACCCGCTTCTCGCAGTTCGTGGCCGGCTTCGTTGACGTAGCGGTAGCCGATGCCCAGCTCGTGCCAGCTGTCACCCAGG                                                                                     >  2:125695/1‑110                     GCGGCATCGAAACCCGCTTCTCGCAGTTCGTGGCCGGCTTCGTTGACGTAGCGGTAGCCGATGCCCAGCTCGTGCCAGCTGTCACCCAGGGCCACGCCC                                                                            <  1:329078/99‑1                     GCGGCATCGAAACCCGCTTCTCGCAGTTCGTGGCCGGCTTCGTTGACGTAGCGGTAGCCGATGCCCAGCTCGTGCCAGCTGTCACCCAGGGCCACGCCC                                                                            >  2:329078/1‑99                                            CAGTTCGTGGCCGGCTTCGTTGACGTAGCGGTAGCCGATGCCCAGCTCGTGCCAGCTGTCACCCAGGGCCACGCCCTGCGAGAAGCGGGTTTCGATGCCGCGCACCCAGTACTCGCGTGGCGACAGCGAGACGAAGCTGCCTTGGTCCAG  <  1:632500/150‑1                                                                                                                                                                                                   GCCACGCGAGTACTGGGTGCGCGGCATCGAAACCCGCTTCTCGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5235950‑5235995 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcagTTCGTGGCCGGCTTCGTTGACGTAGCGGTAGCCGATGCCCAGCTCGTGCCAGCTGTCACCCAGGGCCACGCCCTGCGAGAAGCGGGTTTCGATGCCGCGCACCCAGTACTCGCGTGGCGACAGCGAGACGAAGCTGCCTTGGTCCAG  <  NC_002947/5236067‑5235921

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.