New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5302372 =	54 (1.710)	4 (0.130)	4/240	NT	6.9%	coding (1449/3675 nt)	recB	Chi activated ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease
	?	NC_002947	5302407 =	55 (1.790)					coding (1414/3675 nt)	recB	Chi activated ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease

CTGCAGGCCGAGGCGCGTGAAGCGGGGCGGGGTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5302407‑5302372 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcaGGAACACCTGATTGACCGCCGCCACCATGGCTTTGCTGGAGCGGTAGTTGGTGTCCAGGCTGTGCAGGCGGCCGCTGGTAGCGCGTCGCGCGGCTAGGTAGGTGTAGATGTCGGCACCACGAAAGGCGTAGATCGCCTGCTTGGGG  >  NC_002947/5302407‑5302552                                                                                                                                                                                        CTGCAGGCCGAGGCGCGTGAAGCGGGGCGGGGTGCAGGAACACCTGATTGACCGCCGCCACCATGGCTTTGCTGGAGCGGTAGTTGGTGTCCAGGCTGTGCAGGCGGCCGCTGGTAGCGCGTCGCGCGGCTAGGTAGGTGTAGATGTCGG                                  >  2:327410/1‑150  TGCAGGCCGAGGCGCGTGAAGCGGGGCGGGGTGCAGGAACACCTGATTGACCGCCGCCACCATGGCTTTGCTGGAGCGGTAGTTGGTGTCCAGGCTGTGCAGGCGGCCGCTGGTAGCGCGTCGCGCGGCTAGGTAGGTGTA                                          >  1:566493/1‑141  TGCAGGCCGAGGCGCGTGAAGCGGGGCGGGGTGCAGGAACACCTGATTGACCGCCGCCACCATGGCTTTGCTGGAGCGGTAGTTGGTGTCCAGGCTGTGCAGGCGGCCGCTGGTAGCGCGTCGCGCGGCTAGGTAGGTGTA                                          <  2:566493/141‑1                 GTGAAGCGGGGCGGGGTGCAGGAACACCTGATTGACCGCCGCCACCATGGCTTTGCTGGAGCGGTAGTTGGTGTCCAGGCTGTGCAGGCGGCCGCTGGTAGCGCGTCGCGCGGCTAGGTAGGTGTAGATGTCGGCACCACGAAAGGCGTA                  <  1:327410/150‑1                                 TGCAGGAACACCTGATTGACCGCCGCCACCATGGCTTTGCTGGAGCGGTAGTTGGTGTCCAGGCTGTGCAGGCGGCCGCTGGTAGCGCGTCGCGCGGCTAGGTAGGTGTAGATGTCGGCACCTCGAAAGGCGTAGATCGCCTGCTTGGGG  <  2:459636/150‑1                                                                                                                                                                                        CTGCAGGCCGAGGCGCGTGAAGCGGGGCGGGGTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5302407‑5302372 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcaGGAACACCTGATTGACCGCCGCCACCATGGCTTTGCTGGAGCGGTAGTTGGTGTCCAGGCTGTGCAGGCGGCCGCTGGTAGCGCGTCGCGCGGCTAGGTAGGTGTAGATGTCGGCACCACGAAAGGCGTAGATCGCCTGCTTGGGG  >  NC_002947/5302407‑5302552

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.