| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5421213 | 52 (1.640) | 3 (0.100) | 3/228 | NT | 6.3% | intergenic (‑67/+98) | PP_4760/PP_4761 | alcohol dehydrogenase/haloacid dehalogenase‑like family hydrolase |
| ? | NC_002947 | = 5421275 | 42 (1.440) | intergenic (‑129/+36) | PP_4760/PP_4761 | alcohol dehydrogenase/haloacid dehalogenase‑like family hydrolase | |||||
TCGCAGGTGCCGACCTCGACCTTGTCGTAGCCGCCGCCGGGTTGTACGTAGATGGCCTTGCTGCTCATGGGTGGGTCTCCGTATCAGAGCAAAGAATGGGGTTGAGCATAGACAGATCCGGCCCTTTCGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5421079‑5421213‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcaTGCCCGCTTCCACAGGTATTGCGCACGTCTCGGGGCCTGTGGTGCCCCTGTGGGGGCGGGCGTGCCCGCGAAAGGGCCGGATCTGTCTATGCTCAACCCCATTCTTTGCTCTGATACGGAGACCCACCCATGAGCAGCAAGGCCATC < NC_002947/5421275‑5421129 TCGCAGGTGCCGACCTCGACCTTGTCGTAGCCGCCGCCGGGTTGTACGTAGATGGCCTTGCTGCTCATGGGTGGGTCTCCGTATCAGAGCAAAGAATGGGGTTGAGCATAGACAGATCCGGCCCTTTCGCGGGCA > 1:801282/1‑135TCGCAGGTGCCGACCTCGACCTTGTCGTAGCCGCCGCCGGGTTGTACGTAGATGGCCTTGCTGCTCATGGGTGGGTCTCCGTATCAGAGCAAAGAATGGGGTTGAGCATAGACAGATCCGGCCCTTTCGCGGGCA < 2:801282/135‑1 CCGCCGGGTTGTACGTAGATGTCCTTGCTGCTCATGGGTGGGTCTCCGTATCAGAGCAAAGAATGGGGTTGAGCATAGACAGATCCGGCCCTTTCGCGGGCATGCCCGCTTCCACAGGTATTGCGCACGTCTCGGGGCCTGTGGTGCCC < 1:471662/149‑1 CCGCCGGGTTGTACGTAGATGGCCTTGCTGCTCATGGGTGGGTCTCCGTATCAGAGCAAAGAATGGGGTTGAGCATAGACAGATCCGGCCCTTTCGCGGGCATGCCCGCTTCCACAGGTATTGCGCACGTCTCGGGGCCTGTGGTGCCC > 2:471662/1‑149 GTAGATGGCCTTGCTGCTCATGGGTGGGTCTCCGTATCAGAGCAAAGAATGGGGTTGAGCATAGACAGATCCGGCCCTTTCGCG < 1:548336/84‑1 GTAGATGGCCTTGCTGCTCATGGGTGGGTCTCCGTATCAGAGCAAAGAATGGGGTTGAGCATAGACAGATCCGGCCCTTTCGCG > 2:548336/1‑84 GCTGCTCATGGGTGGGTCTCCGTATCAGAGCAAAGAATGGGGTTGAGCATAGACAGATCCGGCCCTTTCGCGGGCATGCCCGCTTCCACAGGTATTGCGCACGTCTCGGGGCCTGTGGTGCCCCTGTGGGGGCGGGCGTGCCCGCGAAAG < 1:697051/150‑1 GGTCTCCGTATCAGAGCAAAGAATGGGGTTGAGCATAGACAGATCCGGCCCTTTCGCGG < 1:723285/59‑1 GGTCTCCGTATCAGAGCAAAGAATGGGGTTGAGCATAGACAGATCCGGCCCTTTCGCGG > 2:723285/1‑59 TCGCGGGCATGCCCGCTTCCACAGGTATTGCGCACGTCTCGGGGCCTGTGGTGCCCCTGTGGGGGCGGGCGTGCCCGCGAAAGGGCCGGATCTGTCTATGCTCAACCCCATTCTTTGCTCTGATACGGAGACCCACCCATGAGCAGCAAG < 1:813822/150‑1 TCGCGGGCATGCCCGCTTCCACAGGTATTGCGCACGTCTCGGGGCCTGTGGTGCCCCTGTGGGGGCGGGCGTGCCCGCGAAAGGGCCGGATCTGTCTATGCTCAACCCCATTCTTTGCTCTGATACGGAGACCCACCCATGAGCAGCAAG < 2:310215/150‑1 CGCGGGCATGCCCGCTTCCACAGGTATTGCGCACGTCTCGGGGCCTGTGGTGCCCCTGTGGGGGCGGGCGTGCCCGCGAAAGGGCCGGATCTGTCTATGCTCAACCCCATTCTTTGCTCTGATACGGAGACCCACCCATGAGCAGCAAGG < 1:625697/150‑1 GCATGCCCGCTTCCACAGGTATTGCGCACGTCTCGGGGCCTGTGGTGCCCCTGTGGGGGCGGGCGTGCCCGCGAAAGGGCCGGATCTGTCTGTGCTCAACCCCATTCTTTGCTCTGATACGGAGACCCACCCATGAGCAGCAAGGCCATC < 1:34452/150‑1 TCGCAGGTGCCGACCTCGACCTTGTCGTAGCCGCCGCCGGGTTGTACGTAGATGGCCTTGCTGCTCATGGGTGGGTCTCCGTATCAGAGCAAAGAATGGGGTTGAGCATAGACAGATCCGGCCCTTTCGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5421079‑5421213‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcaTGCCCGCTTCCACAGGTATTGCGCACGTCTCGGGGCCTGTGGTGCCCCTGTGGGGGCGGGCGTGCCCGCGAAAGGGCCGGATCTGTCTATGCTCAACCCCATTCTTTGCTCTGATACGGAGACCCACCCATGAGCAGCAAGGCCATC < NC_002947/5421275‑5421129 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |