| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 150270 | 29 (0.920) | 3 (0.100) | 3/240 | NT | 9.7% | coding (680/1134 nt) | PP_0142 | ABC transporter permease |
| ? | NC_002947 | = 150297 | 28 (0.910) | coding (653/1134 nt) | PP_0142 | ABC transporter permease | |||||
GCAGCGAAATCAGCAGGGCCAGTACCCGCGGCACCACCAGCAGCTCCATGGGGTTGAGGCCCAGCGTGCGGATGGCGTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGAAAATGGTCGCGCCGAAGTCGGCCAGCACCGTGGCACCGAGAAAAGCGACTACGGCGCCTACCAGAAAG > NC_002947/150136‑150413 | gCAGCGAAATCAGCAGGGCCAGTACCCGCGGCACCACCAGCAGCTCCATGGGGTTGAGGCCCAGCGTGCGGATGGCGTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGaa < 2:702751/150‑1 (MQ=255) cAGCGAAATCAGCAGGGCCAGTACCCGCGGCACCACCAGCAGCTCCATGGGGTTGAGGCCCAGCGTGCGGATGGCGTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAAt < 2:444452/150‑1 (MQ=255) gAAATCAGCAGGGCCAGTACCCGCGGCACCACCAGCAGCTCCATGGGGTTGAGGCCCAGCGTGCGGATGGCGTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCt > 1:568675/1‑150 (MQ=255) gAAATCAGCAGGGCCAGTACCCGCGGCACCACCAGCAGCTCCATGGGGTTGAGGCCCAGCGTGCGGATGGCGTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCt < 2:757874/150‑1 (MQ=255) gcagGGCCAGTACCCGCGGCACCACCAGCAGCTCCATGGGGTTGAGGCCCAGCGTGCGGATGGCGTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTcagca < 2:568675/150‑1 (MQ=255) cAGTACCCGCGGCACCACCAGCAGCTCCATGGGGTTGAGGCCCAGCGTGCGGATGGCGTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGc > 2:163454/1‑150 (MQ=255) aGTACCCGCGGCACCACCAGCAGCTCCATGGGGTTGAGGCCCAGCGTGCGGATGGCGTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCtgctgacagccattctcatggccggccgcact > 2:84320‑M1/1‑115 (MQ=255) aGTACCCGCGGCACCACCAGCAGCTCCATGGGGTTGAGGCCCAGCGTGCGGATGGCGTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCtgctgacagccattctcatggccggccgcact < 1:84320‑M1/147‑33 (MQ=255) gTACCCGCGGCACCACCAGCAGCTCCATGGGGTTGAGGCCCAGCGTGCGGATGGCGTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCtgctgacagccattctcatggccggccgcactgcca < 1:335310‑M1/150‑37 (MQ=255) accaGCAGCTCCATGGGGTTGAGGCCCAGCGTGCGGATGGCGTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAAc > 1:296310/1‑150 (MQ=255) accaGCAGCTCCATGGGGTTGAGGCCCAGCGTGCGGATGGCGTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAAc < 1:144255/150‑1 (MQ=255) ccaGCAGCTCCATGGGGTTGAGGCCCAGCGTGCGGATGGCGTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTCCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACg < 2:227482/150‑1 (MQ=255) cagcTCCATGGGGTTGAGGCCCAGCGTGCGGATGGCGTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGaa < 1:805121/150‑1 (MQ=255) cATGGGGTTGAGGCCCAGCGTGCGGATGGCGTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAAc < 1:653371/150‑1 (MQ=255) ggTTGAGGCCCAGCGTGCGGATGGCGTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGt < 1:163454/150‑1 (MQ=255) aGCGTGCGGATGGCGTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAgca > 2:73970‑M2/1‑100 (MQ=255) aGCGTGCGGATGGCGTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAgca < 1:73970‑M2/103‑4 (MQ=255) gCGTGCGGATGGCGTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGaaaa < 2:322/150‑1 (MQ=255) cGTGCGGATGGCGTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGAAAAt < 2:381481/150‑1 (MQ=255) ggATGGCGTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTcagca > 2:850037/1‑93 (MQ=255) ggATGGCGTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTcagca < 1:850037/93‑1 (MQ=255) gTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGAAAATGGTCGCGCCGaa > 1:263803/1‑150 (MQ=255) aaTTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATga > 1:18151/1‑68 (MQ=255) aaTTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATga < 2:18151/68‑1 (MQ=255) ttcttcGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGAAAATGGTCGCGCCGAAGTCGGc > 2:730504/1‑150 (MQ=255) cTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGAAAATGGt > 2:565172/1‑123 (MQ=255) cTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGAAAATGGt < 1:565172/123‑1 (MQ=255) ttCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGAAAATGGTCGCGCCGAAGTCGGCCCGAACCGTgaaa > 2:520050/1‑147 (MQ=255) aTCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGAAAATGGTCGCGCCGAAGTCGGCCAGCACCGTGGCACCg > 1:714745/1‑150 (MQ=255) tCGAGCCGTTCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGAAAATGGTCGCGCCGAAGTCGGCCAGCACCGTGGCACCga > 1:755610/1‑150 (MQ=255) gAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGAAAATGGTCGCGCCGAAGTCGGCCAGCACCGTGGCACCgaga > 2:36008/1‑150 (MQ=255) tGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAgcactgccagcgcgttcaccgcgcagatcggctcgatgaaggccaacgaagaaattgacgccatccgcacgctgggcctcaaccccatggagctgctggtggtgccgcgggtac < 1:335310‑M2/150‑115 (MQ=255) ggCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGAAAATGGTCGCGCCGAAGTCGGCCAGCACCGTGGCACCGAGAAAAGCGACTACGGCGCCTACCAGaaa > 2:237500/1‑150 (MQ=255) ggCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGAAAATGGTCGCGCCGAAGTCGGCCAGCACCGTGGCACCGAGAAAAGCGACTACGGCGCCTACCAGaaa < 1:237500/150‑1 (MQ=255) gCAGCGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCAAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGAAAATGGTCGCGCCGAAGTCGGCCAGCCCCGTGGCACCGAGAAAAGCGACTACGGCGCCTACCAGAAAg < 1:266177/150‑1 (MQ=255) aGTGCGGCCGGCCATGAGAATGGCTGTCAGCAgcactgccagcgcgttcaccgcgcagatcggctcgatgaaggccaacgaagaaattgacgccatccgcacgctgggcctcaaccccatggagctgctggtggtgccgcgggtact > 2:84320‑M2/1‑32 (MQ=255) aGTGCGGCCGGCCATGAGAATGGCTGTCAGCAgcactgccagcgcgttcaccgcgcagatcggctcgatgaaggccaacgaagaaattgacgccatccgcacgctgggcctcaaccccatggagctgctggtggtgccgcgggtact < 1:84320‑M2/147‑116 (MQ=255) gTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGaaaa < 2:473079/82‑1 (MQ=255) gTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGaaaa > 1:473079/1‑82 (MQ=255) tgctgctgacagccattctcatggccggccgcactgccagcgcgttcaccgcgcagatcggctcgatgaaggccaacgaagaaattgacgccatccgcacgct < 1:73970‑M1/103‑101 (MQ=255) tgctgctgacagccattctcatggccggccgcactgccagcgcgttcaccgcgcagatcggctcgatgaaggccaacgaagaaattgacgccatccgcacgct > 2:73970‑M1/1‑3 (MQ=255) | GCAGCGAAATCAGCAGGGCCAGTACCCGCGGCACCACCAGCAGCTCCATGGGGTTGAGGCCCAGCGTGCGGATGGCGTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGAAAATGGTCGCGCCGAAGTCGGCCAGCACCGTGGCACCGAGAAAAGCGACTACGGCGCCTACCAGAAAG > NC_002947/150136‑150413 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |