New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 150270	29 (0.920)	3 (0.100)	3/240	NT	9.7%	coding (680/1134 nt)	PP_0142	ABC transporter permease
	?	NC_002947	= 150297	28 (0.910)					coding (653/1134 nt)	PP_0142	ABC transporter permease

GCAGGGCCAGTACCCGCGGCACCACCAGCAGCTCCATGGGGTTGAGGCCCAGCGTGCGGATGGCGTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGAAAATGGTCGCGCCGAAGTCGGCCAGCACCGTGGCACCGAGAAAAGCGACTACGGCGCCTACCAGAAAGGTCAGCAACGCAACGATGGGCGCGGCGTC  >  NC_002947/150148‑150442                                                                                                                                                      |                                                                                                                                                  gcagGGCCAGTACCCGCGGCACCACCAGCAGCTCCATGGGGTTGAGGCCCAGCGTGCGGATGGCGTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTcagca                                                                                                                                                   <  2:568675/150‑1 (MQ=255)        cAGTACCCGCGGCACCACCAGCAGCTCCATGGGGTTGAGGCCCAGCGTGCGGATGGCGTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGc                                                                                                                                            >  2:163454/1‑150 (MQ=255)                        accaGCAGCTCCATGGGGTTGAGGCCCAGCGTGCGGATGGCGTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAAc                                                                                                                            <  1:144255/150‑1 (MQ=255)                        accaGCAGCTCCATGGGGTTGAGGCCCAGCGTGCGGATGGCGTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAAc                                                                                                                            >  1:296310/1‑150 (MQ=255)                         ccaGCAGCTCCATGGGGTTGAGGCCCAGCGTGCGGATGGCGTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTCCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACg                                                                                                                           <  2:227482/150‑1 (MQ=255)                             cagcTCCATGGGGTTGAGGCCCAGCGTGCGGATGGCGTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGaa                                                                                                                       <  1:805121/150‑1 (MQ=255)                                   cATGGGGTTGAGGCCCAGCGTGCGGATGGCGTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAAc                                                                                                                 <  1:653371/150‑1 (MQ=255)                                        ggTTGAGGCCCAGCGTGCGGATGGCGTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGt                                                                                                            <  1:163454/150‑1 (MQ=255)                                                   aGCGTGCGGATGGCGTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAgca                                                                                                                                                >  2:73970‑M2/1‑100 (MQ=255)                                                   aGCGTGCGGATGGCGTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAgca                                                                                                                                                <  1:73970‑M2/103‑4 (MQ=255)                                                    gCGTGCGGATGGCGTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGaaaa                                                                                                <  2:322/150‑1 (MQ=255)                                                     cGTGCGGATGGCGTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGAAAAt                                                                                               <  2:381481/150‑1 (MQ=255)                                                          ggATGGCGTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTcagca                                                                                                                                                   >  2:850037/1‑93 (MQ=255)                                                          ggATGGCGTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTcagca                                                                                                                                                   <  1:850037/93‑1 (MQ=255)                                                                 gTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGAAAATGGTCGCGCCGaa                                                                                   >  1:263803/1‑150 (MQ=255)                                                                       ttcttcGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGAAAATGGTCGCGCCGAAGTCGGc                                                                             >  2:730504/1‑150 (MQ=255)                                                                                   cTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGAAAATGGt                                                                                            <  1:565172/123‑1 (MQ=255)                                                                                   cTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGAAAATGGt                                                                                            >  2:565172/1‑123 (MQ=255)                                                                                    ttCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGAAAATGGTCGCGCCGAAGTCGGCCCGAACCGTgaaa                                                                >  2:520050/1‑147 (MQ=255)                                                                                       aTCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGAAAATGGTCGCGCCGAAGTCGGCCAGCACCGTGGCACCg                                                             >  1:714745/1‑150 (MQ=255)                                                                                        tCGAGCCGTTCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGAAAATGGTCGCGCCGAAGTCGGCCAGCACCGTGGCACCga                                                            >  1:755610/1‑150 (MQ=255)                                                                                          gAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGAAAATGGTCGCGCCGAAGTCGGCCAGCACCGTGGCACCgaga                                                          >  2:36008/1‑150 (MQ=255)                                                                                                                   tGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAgcactgccagcgcgttcaccgcgcagatcggctcgatgaaggccaacgaagaaattgacgccatccgcacgctgggcctcaaccccatggagctgctggtggtgccgcgggtac                                 <  1:335310‑M2/150‑115 (MQ=255)                                                                                                                    ggCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGAAAATGGTCGCGCCGAAGTCGGCCAGCACCGTGGCACCGAGAAAAGCGACTACGGCGCCTACCAGaaa                                <  1:237500/150‑1 (MQ=255)                                                                                                                    ggCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGAAAATGGTCGCGCCGAAGTCGGCCAGCACCGTGGCACCGAGAAAAGCGACTACGGCGCCTACCAGaaa                                >  2:237500/1‑150 (MQ=255)                                                                                                                     gCAGCGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCAAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGAAAATGGTCGCGCCGAAGTCGGCCAGCCCCGTGGCACCGAGAAAAGCGACTACGGCGCCTACCAGAAAg                               <  1:266177/150‑1 (MQ=255)                                                                                                                       aGTGCGGCCGGCCATGAGAATGGCTGTCAGCAgcactgccagcgcgttcaccgcgcagatcggctcgatgaaggccaacgaagaaattgacgccatccgcacgctgggcctcaaccccatggagctgctggtggtgccgcgggtact                                <  1:84320‑M2/147‑116 (MQ=255)                                                                                                                       aGTGCGGCCGGCCATGAGAATGGCTGTCAGCAgcactgccagcgcgttcaccgcgcagatcggctcgatgaaggccaacgaagaaattgacgccatccgcacgctgggcctcaaccccatggagctgctggtggtgccgcgggtact                                >  2:84320‑M2/1‑32 (MQ=255)                                                                                                                        gTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGaaaa                                                                                                <  2:473079/82‑1 (MQ=255)                                                                                                                        gTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGaaaa                                                                                                >  1:473079/1‑82 (MQ=255)                                                                                                                            ggccggccATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGAAAATGGTCGCGCCGAAGTCGGCCAGCACCGTGGCACCGAGAAAAGCGACTACGGCGCCTACCAGAAAGGTCAgca                        <  1:730504/150‑1 (MQ=255)                                                                                                                             gccggccATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGTCCCCGGTGTTAGTGTTCGCGCCGAAGTCGTCCAGCACCGTGGCACCGAGAAAAGCGACTACGGCGCCTACCAGAAAGGTCAgcaa                       <  1:530761/150‑1 (MQ=255)                                                                                                                              ccggccATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGAAAATGGTCGCGCCGAAGTCGGCCAGCACCGTGGCACCGAGAAAAGCGACTACGGCGCCTACCAGAAAGGTCAgcaac                      <  2:714745/150‑1 (MQ=255)                                                                                                                                   cATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGAAAATGGTCGCGCCGAAGTCGGCCAGCACCGTGGCACCGAGAAAAGCGACTACGGCGCCTACCAGAAAGGTCAgcaacgcaac                 >  2:300767/1‑150 (MQ=255)                                                                                                                                         aacggCCGTCAGCAGCACGGCGAACTCACTCAGGAACGAGAACGCACCCACGTCGACGGTGAAAATGGTCGCGCCGAAGTCGGCCAGCACCTTTGCACCGAGAAAAGCGACTACGGCGCCTACCAGAAAGGTCAGCAACACAACGATgac           >  2:53861/4‑148 (MQ=255)                                                                                                                                           tGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGAAAATGGTCGCGCCGAAGTCGGCCAGCACCGTGGCACCGAGAAAAGCGACTACGGCGCCTACCAGAAAGGTCAGCAACGCAACGAt              >  2:640374/1‑145 (MQ=255)                                                                                                                                           aggCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGAAAATGGTCGCGCCGAAGTCGGCCAGCACCGTGGCACCGAGAAAAGCGACTACGGCGCCTACCAGAAAGGTCAGCAACGCAACGAt              <  1:640374/144‑1 (MQ=255)                                                                                                                                                  cagcagCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGAAAATGGTCGCGCCGAAGTCGGCCAGCACCGTGGCACCGAGAAAAGCGACTACGGCGCCTACCAGAAAGGTCAGCAACGCAACGATGGGCGCGGCGTc  <  2:296310/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                  GCAGGGCCAGTACCCGCGGCACCACCAGCAGCTCCATGGGGTTGAGGCCCAGCGTGCGGATGGCGTCAATTTCTTCGTTGGCCTTCATCGAGCCGATCTGCGCGGTGAACGCGCTGGCAGTGCGGCCGGCCATGAGAATGGCTGTCAGCAGCACGGCGAACTCGCGCAGGAACGAGAACGCAACCAGGTCGACGGTGAAAATGGTCGCGCCGAAGTCGGCCAGCACCGTGGCACCGAGAAAAGCGACTACGGCGCCTACCAGAAAGGTCAGCAACGCAACGATGGGCGCGGCGTC  >  NC_002947/150148‑150442

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.