New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1256601 =	28 (0.880)	4 (0.130)	4/240	NT	12.9%	coding (937/1095 nt)	mrp	ATP‑dependent Fe‑S cluster transferase
	?	NC_002947	1256631 =	27 (0.880)					coding (967/1095 nt)	mrp	ATP‑dependent Fe‑S cluster transferase

CGGTGCTGGGCGTGGTCGAGAACATGGCCGTGCATATCTGCTCGAATTGCGGCCATGCCGAACACCTGTTCGGTGAGGGTGGC‑GGCGAGAAGCTGGCCAGCCAGTATGGCGTCGACCTGCTGGCGTCGCTGCCGTTGTCGATGCTGATACGTGAGCAGGCCGACAGCGGCAAGCCCACGGCGATCGCCGAGCCGGAAAGCCAGATTGCCATGGTTTACCAGGAGCTGGCCCGCCAGGTAGGCGCGCGGATCGTGCTGCAGGAAGCTGCGGCGCCGGCAATGCCCAGCATTACCA  >  NC_002947/1256452‑1256745                                                                                                                                                       |                                                                                                                                                 cGGTGCTGGGCGTGGTCGAGAACATGGCCGTGCATATCTGCTCGAATTGCGGCCATGCCGAACACCTGTTCGGTGAGGGTGGC‑GGCGAGAAGCTGGCCAGCCAGTATGGCGTCGACCTGCTGGCGTCGCTGCCGTTGTCGATGCTGATAc                                                                                                                                                  >  1:65172/1‑150 (MQ=255)   gtccttggCGTGGTCGAGAACATGGCCGTGCATATCTGATCGCATTTCGGCCAGGCCGAAAACCTGTTCCGAG‑TGCTGCCGGGCGAGAAGCTGGCCAGCCAGTATGGCGTCGACCTGCTGGCGTCGCTGCCGTTGTCGATGCTGATACGt                                                                                                                                                <  1:405920/144‑1 (MQ=255)         ggCGTGGTCGAGAACATGGCCGTGCATATCTGCTCGAATTGCGGCCATGCCGAACACCTGTTCGGTGAGGGTGGC‑GGCGAGAAGCTGGCCAGCCAGTATGGCGTCGACATGCTGGCGTCGCTGCCGTTGTCGATGCTGATACGTGAGCAg                                                                                                                                          >  2:456708/1‑150 (MQ=255)            gTGGTCGAGAACATGGCCGTGCATATCTGCTCGAATTGCGGCCATGCCGAACACCTGTTCGGTGAGGGTGGC‑GGCGAGAAGCTGGCCAGCCAGTATGGCGTCGACCTGCTGGCGTCGCTGCCGTTGTCGATGCTGATACGTGAGCAGGcc                                                                                                                                       <  1:280739/150‑1 (MQ=255)              ggTCGAGAACATGGCCGTGCATATCTGCTCGAATTGCGGCCATGCCGAACACCTGTTCGGTGAGGGTGGC‑GGCGAGAAGCTGGCCAGCCAGTATGGCGTCGACCTGCTGGCGTCGCTGCCGTTGTCGATGCTGATACGTGAGCAGGCCGa                                                                                                                                     <  2:839241/150‑1 (MQ=255)                  gagaACATGGCCGTGCATATCTGCTCGAATTGCGGCCATGCCGAACACCTGTTCGGTGAGGGTGGC‑GGCGAGAAGCTGGCCAGCCAGTATGGCGTCGACATGCTGGCGTCGCTGCCGTTGTCGATGCTGATACGTGAGCAGGCCGACAGc                                                                                                                                 <  1:456708/150‑1 (MQ=255)                                  atatCTGCTCGAATTGCGGCCATGCCGAACACCTGTTCGGTGAGGGTGGC‑GGCGAGAAGCTGGCCAGCCAGTATGGCGTCGACCTGCTGGCGTCGCTGCCGTTGTCGATGCTGATACGTGAGCAGGCCGACAGCGGCAAGCCCACGGCGa                                                                                                                 >  1:476308/1‑150 (MQ=255)                                              gggcattgccggcgccgcagcttcctgcagcacgatccgcgcgcctacctggcgggccagctcctggtaaaccatggcaatctggctttccggctcggcgatcgcCGTGAGCAGGCCGACAGCGGCAAGCCCACGGCGATc                                                                                                               <  1:800091‑M1/36‑1 (MQ=255)                                              gggcattgccggcgccgcagcttcctgcagcacgatccgcgcgcctacctggcgggccagctcctggtaaaccatggcaatctggctttccggctcggcgatcgcCGTGAGCAGGCCGACAGCGGCAAGCCCACGGCGATc                                                                                                               >  2:800091‑M1/106‑141 (MQ=255)                                                 gCGGCCATGCCGAACACCTGTTCGGTGAGGGTGGC‑GGCGAGAAGCTGGCCAGCCAGTATGGCGTCGACCTGCTGGCGTCGCTGCCGTTGTCGATGCTGATACGTGAGCAGGCCGACAGCGGCAAGCCCACGGCGATCGCCGAGCCGGaaa                                                                                                  <  2:414573/150‑1 (MQ=255)                                                   ggCCATGCCGAACACCTGTTCGGTGAGGGTGGC‑GGCGAGAAGCTGGCCAGCCAGTATGGCGTCGACCTGCTGGCGTCGCTGCCGTTGTCGATGCTGATACGTGAGCAGGCCGACAGCGGCAAGCCCACGGCGATCGCCGAGCCGGAAAGc                                                                                                <  2:65172/150‑1 (MQ=255)                                                     ccATGCCGAACACCTGTTCGGTGAGGGTGGC‑GGCGAGAAGCTGGCCAGCCAGTATGGCGTCGACCTGCTGGCGTCGCTGCCGTTGTCGATGCTGATACGTGAGCAGGCCGACAGCGGCAAGCCCACGGCGATCGCCGAGCCGGaaa                                                                                                  >  1:466387/1‑146 (MQ=255)                                                     ccATGCCGAACACCTGTTCGGTGAGGGTGGC‑GGCGAGAAGCTGGCCAGCCAGTATGGCGTCGACCTGCTGGCGTCGCTGCCGTTGTCGATGCTGATACGTGAGCAGGCCGACAGCGGCAAGCCCACGGCGATCGCCGAGCCGGaaa                                                                                                  <  2:466387/146‑1 (MQ=255)                                                        caccGAACAGGTGTTCGGTGAGGGTGGC‑GGCGAGAAGCTGGCCAGCCAGTATGGCGTCGACCTGCTGGCGTCGCTGCCGTTGTCGATGCTGATACGTGAGCAGGCCGACAGCGGCAAGCCCACGGCGATCGCCGAGCCGGAAAGCCAGAt                                                                                           >  1:638179/3‑150 (MQ=255)                                                         gCCGAACACCTGTTCGGTGAGGGTGGC‑GGCGAGAAGCTGGCCAGCCAGTATGGCGTCGACCTGCTGGCGTCGCTGCCGTTGTCGATGCTGATACGTGAGCAGGCCGACAGACGCAGGCCCACGGCGATCGCCGAGCCGGAAAGCCAGAtt                                                                                          >  1:261993/1‑150 (MQ=255)                                                          ccGAACACCTGTTCGGTGAGGGTGGC‑GGCGAGAAGCTGGCCAGCCAGTATGGCGTCGACCTGCTGGCGTCGCTGCCGTTGTCGATGCTGATACGTGAGCAGGCCGACAGCGGCAAGCCCACGGCGATCGCCGAGCCGGAAAGCCAGATTg                                                                                         >  2:39782/1‑150 (MQ=255)                                                                acCTGTTCGGTGAGGGTGGC‑GGCGAGAAGCTGGCCAGCCAGTATGGCGTCGACCTGCTGGCGTCGCTGCCGTTGTCGATGCTGATACGTGAGCAGGCCGACAGCGGCAAGCCCACGGCGATCGCCGa                                                                                                          <  1:193918/127‑1 (MQ=255)                                                                acCTGTTCGGTGAGGGTGGC‑GGCGAGAAGCTGGCCAGCCAGTATGGCGTCGACCTGCTGGCGTCGCTGCCGTTGTCGATGCTGATACGTGAGCAGGCCGACAGCGGCAAGCCCACGGCGATCGCCGa                                                                                                          <  1:193874/127‑1 (MQ=255)                                                                acCTGTTCGGTGAGGGTGGC‑GGCGAGAAGCTGGCCAGCCAGTATGGCGTCGACCTGCTGGCGTCGCTGCCGTTGTCGATGCTGATACGTGAGCAGGCCGACAGCGGCAAGCCCACGGCGATCGCCGa                                                                                                          >  2:193918/1‑127 (MQ=255)                                                                acCTGTTCGGTGAGGGTGGC‑GGCGAGAAGCTGGCCAGCCAGTATGGCGTCGACCTGCTGGCGTCGCTGCCGTTGTCGATGCTGATACGTGAGCAGGCCGACAGCGGCAAGCCCACGGCGATCGCCGa                                                                                                          >  2:193874/1‑127 (MQ=255)                                                                acCTGTTCGGTGAGGGTGGC‑GGCGAGAAGCTGGCCAGCCAGTATGGCGTCGACCTGCTGGCGTCGCTGCCGTTGTCGATGCTGATACGTGAGCAGGCCGACAGCGGCAAGCCCACGGCGATCGCCGAGCCGGAAAGCCAGATTGCCa                                                                                      <  1:720173/147‑1 (MQ=255)                                                                acCTGTTCGGTGAGGGTGGC‑GGCGAGAAGCTGGCCAGCCAGTATGGCGTCGACCTGCTGGCGTCGCTGCCGTTGTCGATGCTGATACGTGAGCAGGCCGACAGCGGCAAGCCCACGGCGATCGCCGAGCCGGAAAGCCAGATTGCCa                                                                                      >  2:720173/1‑147 (MQ=255)                                                                  cTGTTCGGTGAGGGTGGC‑GGCGAGAAGCTGGCCAGCCAGTATGGCGTCGACCTGCTGGCGTCGCTGCCGTTGTCGATGCTGATACGTGAGCAGGCCGACAGCGGCAAGCCCACGGCGATCGCCGAGCCGGAAAGCCAGATTGCCATGGtt                                                                                 >  1:698257/1‑150 (MQ=255)                                                                        ggTGAGGGTGGC‑GGCGAGAAGCTGGCCAGCCAGTATGGCGTCGACCTGCTGGCGTCGCTGCCGTTGTCGATGCTGATACGTGAGCAGGCCGACAGCGGCAAGCCCACGGCGATCGCCGAGCCGGAAAGCCAGATTGCCATGGTTTACCAg                                                                           <  2:698257/150‑1 (MQ=255)                                                                         gTGAGGGTGGC‑GGCGAGAAGCTGGCCAGCCAGTATGGTGTCGACCTGCTGGCGTCGCTGCCGTTGTCGATGCTGATACGTGTGCAGGCCGACAGCGGCAAGCCCACGGCGATCGCCGAGCCGGAAAGCCAGATTGCCATGGTTTACCAgg                                                                          <  2:376297/150‑1 (MQ=255)                                                                          tGAGCGTGGT‑TGCGATAAGCTGGCCAGCCAGTATGGCGTCGACCTGCTGGCGTCGCTGCCGTTGTCGATGCTGATACGTGAGCAGGCCGACAGCGGCAAGCCCACGGCGATCGCCGAGCCGGAAAGCCAGATTGCCATGGTTTACCAGGa                                                                         <  2:476308/150‑1 (MQ=255)                                                                              ggTGGC‑GGCGAGAAGCTGGCCAGCCAGTATGGCGTCGACCTGCTGGCGTCGCTGCCGTTGTCGATGCTGATACGTGAGCAGGCCGACAGCGGCAAGCCCACGGCGATCGCCGAGCCGGAAAGCCAGATTGCCATGGTTTACCAGGAGCTg                                                                     <  1:640150/150‑1 (MQ=255)                                                                                     ggcgAGAAGCTGGCCAGCCAGTATGGCGTCGACCTGCTGGCGTCGCTGCCGTTGTCGATGCTGATACGTGAGCAGGCCGACAGCGGCAAGCCCACGGCGATCGCCGAGCCGGAAAGCCAGATTGCCATGGTTTACCAGGAGCTGGCCCGc                                                               <  1:353600/150‑1 (MQ=255)                                                                                                   gggccagctcctggtaaaccatggcaatctggctttccggctcggcgatcgcCGTGAGCAGGCCGACAGCGGCAAGCCCAc                                                                                                                      <  2:179739‑M1/29‑1 (MQ=255)                                                                                                   gggccagctcctggtaaaccatggcaatctggctttccggctcggcgatcgcCGTGAGCAGGCCGACAGCGGCAAGCCCAc                                                                                                                      >  1:179739‑M1/53‑81 (MQ=255)                                                                                                               cGTCGACCTGCTGGCGTCGCTGCCGTTGTCGATGCTGATACGTGAGCAGGCCGACAGCGGCAAGCCCACGGCGATCGCCGAGCCGGAAAGCCAGATTGCCATGGTTTACCAGGAGCTGGCCCGCCAGGTAGGCGCGCGGATCGTGCTGCa                                     <  2:255455/150‑1 (MQ=255)                                                                                                                  cGACCTGCTGGCGTCGCTGCCGTTGTCGATGCTGATACGTGAGCAGGCCGACAGCGGCAAGCCCACGGCGATCGCCGAGCCGGAAAGCCAGATTGCCATGGTTTACCAGGAGCTGGCCCGCCAGGTAGGCGCGCGGATCGTGCTGCAGGa                                  <  1:171439/150‑1 (MQ=255)                                                                                                                   gACCTGCTGGCGTCGCTGCCGTTGTCGATGCTGATACGTGAGCAGGCCGACAGCGGCAAGCCCACGGCGATCGCCGAGCCGGAAAGCCAGATTGCCATGGTTTACCAGGAGCTGGCCCGCCAGGTAGGCGCGCGGATCGTGCTGCAGGaa                                 <  1:39782/150‑1 (MQ=255)                                                                                                                                     ccGTTGTCGATGCTGATACGTGAGCAGGCCGACAGCGGCAAGCCCACGGCGATCGCCGAGCCGGAAAGCCAGATTGCCATGGTTTACCAGGAGCTGGCCCGCCAGGTAGGCGCGCGGATCGTGCTGCAGGAAGCTGCGGCGCCGGCAATg               >  2:23880/1‑150 (MQ=255)                                                                                                                                                  tGATACGTGAGCAGGCCGACAGCGGCAAGCCCACGGCGATCGCCGAGCCGGAAAGCCAGATTGCCATGGTTTACCAGGAGCTGGCCCGCCAGGTAGGCGCGCGGATCGTGCTGCAGGAAGCTGCGGCGCCGGCAATGCCCAGCATTACCa  >  1:546055/1‑150 (MQ=255)                                                                                                                                                  tGATACGTGAGCAGGCCGACAGCGGCAAGCCCACGGCGATCGCCGAGCCGGAAAGCCAGATTGCCATGGTTTACCAGGAGCTGGCCCGCCAGGTAGGCGCGCGGATCGTGCTGCAGGAAGCTGCGGCGCCGGCAATGCCCAGCATTACCa  >  1:467110/1‑150 (MQ=255)                                                                                                                                                       |                                                                                                                                                 CGGTGCTGGGCGTGGTCGAGAACATGGCCGTGCATATCTGCTCGAATTGCGGCCATGCCGAACACCTGTTCGGTGAGGGTGGC‑GGCGAGAAGCTGGCCAGCCAGTATGGCGTCGACCTGCTGGCGTCGCTGCCGTTGTCGATGCTGATACGTGAGCAGGCCGACAGCGGCAAGCCCACGGCGATCGCCGAGCCGGAAAGCCAGATTGCCATGGTTTACCAGGAGCTGGCCCGCCAGGTAGGCGCGCGGATCGTGCTGCAGGAAGCTGCGGCGCCGGCAATGCCCAGCATTACCA  >  NC_002947/1256452‑1256745

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.