| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1666839 | 23 (0.730) | 6 (0.220) | 6/216 | NT | 20.0% | intergenic (‑69/‑202) | PP_1460/ffh | membrane protein/signal recognition particle GTPase subunit |
| ? | NC_002947 | = 1666868 | 28 (1.020) | intergenic (‑98/‑173) | PP_1460/ffh | membrane protein/signal recognition particle GTPase subunit | |||||
ATCAGGTTGGGGATGAGGCTGGGTGAGGAGAACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCTATAATCGCCGCCTTGCTGTGCCCGGCGGGTGTGTGT > NC_002947/1666694‑1666987 | aTCAGGTTGGGGATGAGGCTGGGTGAGGAGAACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGatcc > 2:565592‑M1/1‑146 (MQ=255) aTGAGGCTGGGTGAGGAGAACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCGCGCCCGCTCCCACAGGatcctcactacctgca > 1:621383‑M1/1‑134 (MQ=255) gagaACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCTTAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATcc < 1:412269‑M2/150‑3 (MQ=255) aCATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATTAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCGCGCCCGCTCCCACAGGatcctcactacctgcaggcctgcgccatacctgtg < 2:573091‑M1/150‑36 (MQ=255) cATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGatcctcactacctgcaggcctgcgccatacctgtgg < 1:565592‑M1/150‑37 (MQ=255) aaGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATg > 1:625988/1‑115 (MQ=255) aaGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATg < 2:625988/115‑1 (MQ=255) aGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCGCGCCCGCTCCCACAGGatcctcactacctgcaggcctgcgccatacctgtgggagc < 2:621383‑M1/150‑41 (MQ=255) ggTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGgcgc > 2:127140/1‑150 (MQ=255) ttGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGgcgcgc < 1:481963/150‑1 (MQ=255) gAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCcgcg > 2:586482/1‑150 (MQ=255) aaGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCa < 1:127140/150‑1 (MQ=255) gATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTa > 2:270582/1‑150 (MQ=255) cGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTa < 2:73873/145‑1 (MQ=255) cGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTa > 1:73873/1‑145 (MQ=255) gCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTAc > 1:56291/1‑145 (MQ=255) gCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTAc < 2:56291/145‑1 (MQ=255) aGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGcgtc > 2:286316/1‑150 (MQ=255) ggAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGTTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATc < 2:374708/133‑1 (MQ=255) ggAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATc > 1:374708/1‑133 (MQ=255) gAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGatcctcactacctgcaggcctgcgccatacctgtgggagcgg > 1:816156‑M1/1‑52 (MQ=255) gAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGatcctcactacctgcaggcctgcgccatacctgtgggagcgg < 2:816156‑M1/94‑43 (MQ=255) aCTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCt < 1:286316/150‑1 (MQ=255) tGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGc > 2:465379/1‑150 (MQ=255) aaGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCAc > 1:682550/1‑150 (MQ=255) aaGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCAc > 1:170856/1‑150 (MQ=255) gCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTc > 2:767396/1‑150 (MQ=255) aTTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCTATAATcgccgc < 2:682550/150‑1 (MQ=255) cGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCTATAATCGCCGCCtt < 2:170856/150‑1 (MQ=255) ggCGCGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCTATAATCGCCGCCTTGCtg > 2:267613/1‑150 (MQ=255) ggCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAaga < 2:549994/77‑1 (MQ=255) ggCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAaga > 1:549994/1‑77 (MQ=255) ccGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATcctgtgggagcgggcgtgcccacgaatgccccgacacaagccttcagtcttc > 1:816156‑M2/1‑42 (MQ=255) ccGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATcctgtgggagcgggcgtgcccacgaatgccccgacacaagccttcagtcttc < 2:816156‑M2/94‑53 (MQ=255) gCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATcctgtgggagcgggcgcgcccacgaatgccccgacacaagccttcagtcttccttgatcagcggaatctatgccaaactccgtctctttaaaggctcgccaaccaggact < 2:621383‑M2/150‑111 (MQ=255) cccACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGTAGTGTACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCTATAATCGCCGCCTTGCTGTGCCCGGCGGgt < 1:270582/150‑1 (MQ=255) ccACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATcctgtgggagcgggcgtgcccacgaatgccccgacacaagccttcagtcttccttgatcagcggaatctatgccaaactccgtctctttaaaggctcgccaaccaggacttatg < 1:565592‑M2/150‑115 (MQ=255) cacaGGTATGGCGCAGGCCTGCAGGTAGTGAGGATcctgtgggagcgggcgcgcccacgaatgccccgacacaagccttcagtcttccttaatcagcggaatctatgccaaactccgtctctttaaaggctcgccaaccaggacttatgt < 2:573091‑M2/150‑116 (MQ=255) aGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCGCCTGATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCTCTATAATCGCCGCCTTGCTGTGCCCGGCGGgtgtgtg > 1:531449/1‑150 (MQ=255) ggatcctcactacctgcaggcctgcgccatacctgtgggagcgggcgtgcccacgaatgccccgacacaagccttcagtcttccttgatcagcggaatctaagccaaactccgtctctttaaaggctcgccaaccaggacttatgttctc < 1:412269‑M1/150‑149 (MQ=255) | ATCAGGTTGGGGATGAGGCTGGGTGAGGAGAACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCTATAATCGCCGCCTTGCTGTGCCCGGCGGGTGTGTGT > NC_002947/1666694‑1666987 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |