New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1666839	23 (0.730)	6 (0.220)	6/216	NT	20.0%	intergenic (‑69/‑202)	PP_1460/ffh	membrane protein/signal recognition particle GTPase subunit
	?	NC_002947	= 1666868	28 (1.020)					intergenic (‑98/‑173)	PP_1460/ffh	membrane protein/signal recognition particle GTPase subunit

GAGAACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCTATAATCGCCGCCTTGCTGTGCCCGGCGGGTGTGTGTTTCCCCCCTGGCACCTGACAAACCTCGGCT  >  NC_002947/1666721‑1667017                                                                                                                                                    |                                                                                                                                                      gagaACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCTTAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATcc                                                                                                                                                     <  1:412269‑M2/150‑3 (MQ=255)                ggTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGgcgc                                                                                                                                      >  2:127140/1‑150 (MQ=255)                  ttGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGgcgcgc                                                                                                                                    <  1:481963/150‑1 (MQ=255)                       gAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCcgcg                                                                                                                               >  2:586482/1‑150 (MQ=255)                                aaGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCa                                                                                                                      <  1:127140/150‑1 (MQ=255)                                                    gATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTa                                                                                                  >  2:270582/1‑150 (MQ=255)                                                         cGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTa                                                                                                  >  1:73873/1‑145 (MQ=255)                                                         cGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTa                                                                                                  <  2:73873/145‑1 (MQ=255)                                                          gCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTAc                                                                                                 >  1:56291/1‑145 (MQ=255)                                                          gCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTAc                                                                                                 <  2:56291/145‑1 (MQ=255)                                                                  aGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGcgtc                                                                                    >  2:286316/1‑150 (MQ=255)                                                                   ggAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGTTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATc                                                                                                    <  2:374708/133‑1 (MQ=255)                                                                   ggAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATc                                                                                                    >  1:374708/1‑133 (MQ=255)                                                                        aCTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCt                                                                              <  1:286316/150‑1 (MQ=255)                                                                          tGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGc                                                                            >  2:465379/1‑150 (MQ=255)                                                                            aaGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCAc                                                                          >  1:682550/1‑150 (MQ=255)                                                                            aaGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCAc                                                                          >  1:170856/1‑150 (MQ=255)                                                                               gCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTc                                                                       >  2:767396/1‑150 (MQ=255)                                                                                             aTTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCTATAATcgccgc                                                         <  2:682550/150‑1 (MQ=255)                                                                                                cGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCTATAATCGCCGCCtt                                                      <  2:170856/150‑1 (MQ=255)                                                                                                    ggCGCGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCTATAATCGCCGCCTTGCtg                                                  >  2:267613/1‑150 (MQ=255)                                                                                                    ggCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAaga                                                                                                                           >  1:549994/1‑77 (MQ=255)                                                                                                    ggCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAaga                                                                                                                           <  2:549994/77‑1 (MQ=255)                                                                                                           ccGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATcctgtgggagcgggcgtgcccacgaatgccccgacacaagccttcagtcttc                                                                                                   <  2:816156‑M2/94‑53 (MQ=255)                                                                                                           ccGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATcctgtgggagcgggcgtgcccacgaatgccccgacacaagccttcagtcttc                                                                                                   >  1:816156‑M2/1‑42 (MQ=255)                                                                                                             gCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATcctgtgggagcgggcgcgcccacgaatgccccgacacaagccttcagtcttccttgatcagcggaatctatgccaaactccgtctctttaaaggctcgccaaccaggact                                         <  2:621383‑M2/150‑111 (MQ=255)                                                                                                                cccACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGTAGTGTACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCTATAATCGCCGCCTTGCTGTGCCCGGCGGgt                                      <  1:270582/150‑1 (MQ=255)                                                                                                                 ccACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATcctgtgggagcgggcgtgcccacgaatgccccgacacaagccttcagtcttccttgatcagcggaatctatgccaaactccgtctctttaaaggctcgccaaccaggacttatg                                     <  1:565592‑M2/150‑115 (MQ=255)                                                                                                                  cacaGGTATGGCGCAGGCCTGCAGGTAGTGAGGATcctgtgggagcgggcgcgcccacgaatgccccgacacaagccttcagtcttccttaatcagcggaatctatgccaaactccgtctctttaaaggctcgccaaccaggacttatgt                                    <  2:573091‑M2/150‑116 (MQ=255)                                                                                                                     aGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCGCCTGATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCTCTATAATCGCCGCCTTGCTGTGCCCGGCGGgtgtgtg                                 >  1:531449/1‑150 (MQ=255)                                                                                                                                    cTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCTATAATCGCCGCCTTGCTGTGCCCGGCGGGTGTGTGTTTCCCCCCTGGCAc                  >  1:247867/1‑150 (MQ=255)                                                                                                                                     tGCAGGTAGTGAGGATcctgtgggagcgggcgcgcccacgaatgccccgacacaagccttcagtcttccttgatcagcggaatctatgccaaactccgtctctttaaaggctcgccaaccaggacttatgttctcctcacccagcctcat                 >  1:621383‑M2/1‑16 (MQ=255)                                                                                                                                        aGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCTATAATCGCCGCCTTGCTGTGCCCGGCGGGTGTGTGTTTCCCCCCTGGCACCTGa              <  1:267613/150‑1 (MQ=255)                                                                                                                                          gTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCTATAATCGCCGCCTTGCTGTGCCCGGCGGGTGTGTGTTTCCCCCCTGGCACCTTACa            >  1:571167/1‑150 (MQ=255)                                                                                                                                           tAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCTATAATCGCCGCCtt                                                      <  2:523397/107‑1 (MQ=255)                                                                                                                                           tAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCTATAATCGCCGCCtt                                                      >  1:523397/1‑107 (MQ=255)                                                                                                                                            aGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCTATAATCGCCGCCTTGCTGTGCCCGGCGGGTGTGTGTTTCCCCCCTGGCACCTGACaaa          <  1:465379/150‑1 (MQ=255)                                                                                                                                                aGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCTATAATCGCCGCCTTGCTGTGCCCGGCGGGTGTGTGTTTCCCCCCTGGCACCTGACAAACCTc      <  1:586482/150‑1 (MQ=255)                                                                                                                                                 ggATcctgtgggagcgggcgtgcccacgaatgccccgacacaagccttcagtcttccttgatcagcggaatctatgccaaactccgtctctttaaaggctcgccaaccaggacttatgttctcctcacccagcctcatccccaacctgat     >  2:565592‑M2/1‑4 (MQ=255)                                                                                                                                                 ggATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCTATAATCGCCGCCTTGCt                                                   >  2:511007/1‑104 (MQ=255)                                                                                                                                                 ggATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCTATAATCGCCGCCTTGCt                                                   <  1:511007/104‑1 (MQ=255)                                                                                                                                                  gctCCTGTGGGAGCGGGCGCGCCCGCGGACAGGCCAGCACAGCTAACGAATATCTACCAAGGTGTGCGTGGTCGCTGCACTTCGATATAATCGCCGCCTTTCTGTGTCCGGCGGGTGTGTGTTTCCCCCCTGGCACCTGACAAACTTCgg    >  2:695817/3‑150 (MQ=255)                                                                                                                                                    tCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGgt                                                                                           >  2:436066/1‑61 (MQ=255)                                                                                                                                                    tCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGgt                                                                                           <  1:436066/61‑1 (MQ=255)                                                                                                                                                    tCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCTATAATCGCCGCCTTGCTGTGCCCGGCGGGTGTGTGTTTCCCCCCTGGCACCTGACAAACCTCGGCt  >  2:509940/1‑150 (MQ=255)                                                                                                                                                    |                                                                                                                                                      GAGAACATAAGTCCTGGTTGGCGAGCCTTTAAAGAGACGGAGTTTGGCATAGATTCCGCTGATCAAGGAAGACTGAAGGCTTGTGTCGGGGCATTCGTGGGCACGCCCGCTCCCACAGGTATGGCGCAGGCCTGCAGGTAGTGAGGATCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCAGCACAGCCACCGAATATCTACCAAGGTGTGCGTCGTCGCTGCACTTCGCTATAATCGCCGCCTTGCTGTGCCCGGCGGGTGTGTGTTTCCCCCCTGGCACCTGACAAACCTCGGCT  >  NC_002947/1666721‑1667017

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.