New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1949563 =	29 (0.920)	3 (0.100)	5/232	NT	10.1%	coding (135/1746 nt)	PP_1749	acetyltransferase
	?	NC_002947	1949591 =	26 (0.880)					coding (107/1746 nt)	PP_1749	acetyltransferase

ACAGCTGCTGAGGGGCCTGTGCCAACACCTGCTGCGGTGCGGCCACGTACAGGGCGATGTCGCGTTCGCCCGGGTGCTCGTCGAGCAGATCCTCGGCCAGGGAAGCCGGGTCGGGGTAGGTGTGGCCTATCAACAGCCGGCCCCAGCCGCAGTGCACG‑GCAC‑GCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCC  >  NC_002947/1949421‑1949709                                                                                                                                               |                                                                                                                                                     tgaacctgtggctgagcgaacaaggaatctgaccgatgaaagcccatgaaatcgcttatggtcagcgcctgctgcgcggccaggcgccgtcctacgagcgcctgcaggcgcgcctggccggcgacggcagccagccacacgaCCAGCCGc                                                                                                                                               >  1:394968‑M1/143‑150 (MQ=255) aCAGCTGCTGAGGGGCCTGTGCCAACACCTGCTGCGGTGCGGCCACGTACAGGGCGATGTCGCGTTCGCCCGGGTGCTCGTCGAGCAGATCCTCGGCCAGGGAAGCCGGGTCGGGGTAGGTGTGGCCTATCAACAGCCGGCCCCAGCCGc                                                                                                                                               <  1:388885/150‑1 (MQ=255)         tgAGGGGCCTGTGCCAACACCTGCTGCGGTGCGGCCACGTACAGGGCGATGTCGCGTTCGCCCGGGTGCTCGTCGAGCAGATCCTCGGCCAGGGAAGCCGGGTCGGGGTAGGTGTGGCCTATCAACAGCCGGCCCCAGCCGCAGTgcacg                                                                                                                                       <  1:687306/150‑1 (MQ=255)                ccTGTGCCAACACCTGCTGCGGTGCGGCCACGTACAGGGCGATGTCGCGTTCGCCCGGGTGCTCGTCGAGCAGATCCTCGGCCAGGGAAGCCGGGTCGGGGTAGGTGTGGCCTATCAACAGCCGGCCCCAGCCGCAGTGCACG‑GCAc‑gcg                                                                                                                              >  1:215908/1‑150 (MQ=255)                    acaaggaatctgaccgatgcacgacaatgtcctcgcttattggcagcgcctgctgcgcggccaggcgccgtcctacgagcgcctgcaggcgcgcctggccggcgacggcagccagccacacgaCCAGCCGCAGTGCACG‑GCAC‑GCGGCTg                                                                                                                          >  2:8091‑M1/124‑150 (MQ=255)                       cAACACCTGCTGCGGTGCGGCCACGTACAGGGCGATGTCGCGTTCGCCCGGGTGCTCGTCGAGCAGATCCTCGGCCAGGGAAGCCGGGTCGGGGTAGGTGTGGCCTATCAACAGCCGGCCCCAGCCGCAGTGCACG‑GCAC‑GCGGCTGGTc                                                                                                                       >  2:546642/1‑150 (MQ=255)                             ctgctgCGGTGCGGCCACGTACAGGGCGATGTCGCGTTCGCCCGGGTGCTCGTCGAGCAGATCCTCGGCCAGGGAAGCCGGGTCGGGGTAGGTGTGGCCTATCAACAGCCGGCCCCAGCCGCAGTGCACG‑GCAC‑GCGGCTGGTCGTGtgg                                                                                                                 >  2:593841/1‑150 (MQ=255)                                  gcggtgcggCCACGTACAGGGCGATGTCGCGTTCGCCCGGGTGCTCGTCGAGCAGATCCTCGGCCAGGGAAGCCGGGTCGGGGTAGGTGTGGCCTATCAACAGCCGGCCCCAGCCGCAGTGCACG‑GCAC‑GCGGCTGGTCGTGTGGCTggc                                                                                                            >  2:652744‑M2/1‑147 (MQ=255)                                     gtgcggCCACGTACAGGGCGATGTCGCGTTCGCCCGGGTGCTCGTCGAGCAGATCCTCGGCCAGGGAAGCCGGGTCGGGGTAGGTGTGGCCTATCAACAGCCGGCCCCAGCCGCAGTGCACG‑GCAC‑GCGGCTGGTCGTGTGGCTGGCTGc                                                                                                         >  2:632873/1‑150 (MQ=255)                                          gCCACGTACAGGGCGATGTCGCGTTCGCCCGGGTGCTCGTCGAGCAGATCCTCGGCCAGGGAAGCCGGGTCGGGGTAGGTGTGGCCTATCAACAGCCGGCCCCAGCCGCAGTGCACG‑GCAC‑GCGGCTGGTCGTGTGGCTGGCTGCCGTCg                                                                                                    >  1:342131/1‑150 (MQ=255)                                            cACGTACAGGGCGATGTCGCGTTCGCCCGGGTGCTCGTCGAGCAGATCCTCGGCCAGGGAAGCCGGGTCGGGGTAGGTGTGGCCTATCAACAGCCGGCCCCAGCCGCAGTGCACG‑GCAC‑GCGGCTGGTCGTGTGGCTGGCTGCCGTCGcc                                                                                                  >  2:289424/1‑150 (MQ=255)                                                 aCAGGGCGATGTCGCGTTCGCCCGGGTGCTCGTCGAGCAGATCCTCGGCCAGGGAAGCCGGGTCGGGGTAGGTGTGGCCTATCAACAGCCGGCCCCAGCCGCAGTGCACG‑GCAC‑GCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCa                                                                                             >  2:198073/1‑150 (MQ=255)                                                              gcgTTCGCCCGGGTGCTCGTCGAGCAGATCCTCGGCCAGGGAAGCCGGGTCGGGGTAGGTGTGGCCTATCAACAGCCGGCCCCAGCCGCAGTGCACG‑GCAC‑GCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAg                                                                                <  1:198073/150‑1 (MQ=255)                                                              gcgTTCGCCCGGGTGCTCGTCGAGCAGATCCTCGGCCAGGGAAGCCGGGTCGGGGTAGGTGTGGCCTATCAACAGCCGGCCCCAGCCGCAGTGCACG‑GCAC‑GCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAg                                                                                >  1:425612/1‑150 (MQ=255)                                                                     cccGGGTGGTCGTCGAGCAGATCCTCGGCCAGGGAAGCCGGGTCGGGGTAGGTGTGGCCTATCAACAGCCGGCCCCAGCCGCAGTGCACG‑GCAC‑GCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCg                                                                         <  1:511632/150‑1 (MQ=255)                                                                      ccGGGTGCTCGTCGAGCAGATCCTCGGCCAGGGAAGCCGGGTCGGGGTAGGTGTGGCCTATCAACAGCCGGCCCCAGCCGCAGTGCACG‑GCAC‑GCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGt                                                                        >  1:785803/1‑150 (MQ=255)                                                                       cGGGTGCTCGTCGAGCAGATCCTCGGCCAGGGAAGCCGGGTCGGGGTAGGTGTGGCCTATCAACAGCCGGCCCCAGCCGCAGTGCACG‑GCAC‑GCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTa                                                                       <  2:215908/150‑1 (MQ=255)                                                                           tGCTCGTCGAGCAGATCCTCGGCCAGGGAAGCCGGGTCGGGGTAGGTGTGGCCTATCAACAGCCGGCCCCAGCCGCAGTGCACG‑GCAC‑GCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGAc                                                                   <  1:243846/150‑1 (MQ=255)                                                                              tcgtcgAGCAGATCCTCGGCCAGGGAAGCCGGGTCGGGGTAGGTGTGGCCTATCAACAGCCGGCCCCAGCCGCAGTGCACG‑GCAC‑GCGGCTGGTCGTGTGGCTGGGTGCTGTCGCCGGCCAGGGGCGGCTGCAGGCGGACGAAGGGCggg                                                                >  2:326619/1‑149 (MQ=255)                                                                                 tcgAGCAGATCCTCGGCCAGGGAAGCCGGGTCGGGGTAGGTGTGGCCTATCAACAGCCGGCCCCAGCCGCAGTGCACG‑GCAC‑GCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGcc                                                             >  2:793350/1‑150 (MQ=255)                                                                                   gAGCAGATCCTCGGCCAGGGAAGCCGGGTCGGGGTAGGTGTGGCCTATCATCAGCCGGCCCCAGCCGCAGTGCACG‑GCAC‑GCGGCTGGTCGTGTGGCTGGCTTCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTg                                                           >  2:756624/1‑150 (MQ=255)                                                                                   gAGCAGATCCTCGGCCAGGGAAGCCGGGTCGGGGTAGGTGTGGCCTATCAACAGCCGGCCCCAGCCGCAGTGCACG‑GCAC‑GCGGCTGGTCGTGTGGCGGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGTCGGCGccgg                                                           >  1:464045/1‑148 (MQ=255)                                                                                       aGATCCTCGGCCAGGGAAGCCGGGTCGGGGTAGGTTTGGCCTATCAACAGCCGAACCAAGCCGCAGTGCACG‑GCAC‑GCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCcg                                                       >  1:367251/1‑150 (MQ=255)                                                                                         aTCCTCGGCCAGGGAAGCCGGGTCGGGGTAGGTGTGGCCTATCAACAGCCGGCCCCAGCCGCAGTGCACG‑GCAC‑GCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCcgcg                                                     >  2:800006/1‑150 (MQ=255)                                                                                               ggCCAGGGAAGCCGGGTCGGGGTAGGTGTGGCCTATCAACAGCCGGCCCCAGCCGCAGTGCACG‑GCAC‑GCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGTCGCGcagcag                                               <  2:425612/150‑1 (MQ=255)                                                                                               cgagcgcctgcaggcgcgcctggccggcgacggcagccagccacacgaCCAGCCGCAGTGCACG‑GCAC‑GCgg                                                                                                                             <  1:715221‑M1/24‑1 (MQ=255)                                                                                               cgagcgcctgcaggcgcgcctggccggcgacggcagccagccacacgaCCAGCCGCAGTGCACG‑GCAC‑GCgg                                                                                                                             >  2:715221‑M1/49‑72 (MQ=255)                                                                                                 ccAGGGAAGCCGGGTGGGGGTGGGTGTGGCGTATTAACAGCCGGCCCCAGCCGCAGTGCACG‑GCAC‑GCGGCTGGTCGGGTGGCTGGCTGGCGTCGCCGGCCAGGCGCGCCGGGAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGgc                                             <  2:431799/150‑1 (MQ=255)                                                                                                          ccGGGTCGGGGTAGGTGTGGCCTATCAACAGCCGGCCCCAGCCGCAGTGCACG‑GCAC‑GCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCCGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCAt                                    >  2:442542/1‑150 (MQ=255)                                                                                                                        gtgtGGCCTATCAACAGCCGGCCCCAGCCGCAGTGCACG‑GCAC‑GCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACCGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATgg                      <  1:546642/150‑1 (MQ=255)                                                                                                                             gCCTATCAACAGCCGGCCCCAGCCGCAGTGCACG‑GCAC‑GCGGCTGGTCGTGTGGCTgg                                                                                                             >  1:344857‑M2/1‑56 (MQ=255)                                                                                                                             gCCTATCAACAGCCGGCCCCAGCCGCAGTGCACG‑GCAC‑GCGGCTGGTCGTGTGGCTgg                                                                                                             <  2:344857‑M2/58‑3 (MQ=255)                                                                                                                             gCCTATCAACAGCCGGCCCCAGCCGCAGTGCACG‑GCAC‑GCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCttt                 >  1:264623/1‑150 (MQ=255)                                                                                                                               cTATCAACAACCGGCCCCAGCCGCAGTGCACG‑GCAC‑GCGGCTGGTCGTGTGGCTggctgttgataggccacacctaccccgacccggcttccctggccgaggatctgctcgacgagcacccgggcgaacgcgacatcgccctgtacgtgg               <  1:614305‑M2/150‑97 (MQ=255)                                                                                                                                tATCAACAGCCGCCCCCAGCCGCAGTGCACG‑GCAC‑GCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCAt              <  1:326619/150‑1 (MQ=255)                                                                                                                                 aTCAACAGCCGGCCCCAGCCGCAGTGCACG‑GCAC‑GCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATc             <  1:289424/150‑1 (MQ=255)                                                                                                                                  tCAACAGCCGGCCCCAGCCGCAGTGCACG‑GCAC‑GCGGCTGGTCGTGTGGCTggctgttgataggccacacctaccccgacccggcttccctggccgaggatctgctc                                                       >  2:828001‑M2/1‑51 (MQ=255)                                                                                                                                  tCAACAGCCGGCCCCAGCCGCAGTGCACG‑GCAC‑GCGGCTGGTCGTGTGGCTggctgttgataggccacacctaccccgacccggcttccctggccgaggatctgctc                                                       <  1:828001‑M2/107‑57 (MQ=255)                                                                                                                                    aaCAGCCGGCCCCAGCCGCAGTGCACG‑GCAC‑GCGGCTGGTCGTGTGGCTggctgttgataggccacacctaccccgacccggcttccctggccgaggatctgctcgacgagcacccgggcgaacgcgacatcgccctgtacgtggccgca          <  2:340857‑M2/150‑102 (MQ=255)                                                                                                                                        gCCGGCCCCAGCCGCAGTGCACG‑GCAC‑GCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGa      <  2:488120/150‑1 (MQ=255)                                                                                                                                          cacgaCCAGCCGC‑GTGCCGT‑GCACTGCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGgcgc                                                              >  1:183408‑M1/6‑92 (MQ=255)                                                                                                                                          cacgaCCAGCCGC‑GTGC‑CGTGCACTGCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGgcgc                                                              <  2:183408‑M1/87‑1 (MQ=255)                                                                                                                                            gCCCCAGCCGCAGTGCACG‑GCAC‑GCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTcc  >  2:408527/1‑150 (MQ=255)                                                                                                                                               CCAGCCGCAGTGCACG‑GCAC‑GCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATc             >  2:422509‑M1/1‑136 (MQ=255)                                                                                                                                               CCAGCCGCAGTGCACG‑GCAC‑GCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATc             <  1:422509‑M1/136‑1 (MQ=255)                                                                                                                                               |                                                                                                                                                     ACAGCTGCTGAGGGGCCTGTGCCAACACCTGCTGCGGTGCGGCCACGTACAGGGCGATGTCGCGTTCGCCCGGGTGCTCGTCGAGCAGATCCTCGGCCAGGGAAGCCGGGTCGGGGTAGGTGTGGCCTATCAACAGCCGGCCCCAGCCGCAGTGCACG‑GCAC‑GCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCC  >  NC_002947/1949421‑1949709

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.