New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2296853	39 (1.230)	3 (0.100)	3/240	NT	7.1%	coding (3312/3645 nt)	sbcC	exonuclease subunit SbcC
	?	NC_002947	= 2296899	41 (1.340)					coding (3266/3645 nt)	sbcC	exonuclease subunit SbcC

TCGTCGATGAACAGCGACTCGATACGCAAGGTGCTGGACGCCATCGACGCCAGGCCCAGGGCCAGGGCCAGCGACACCAGGAAGGTTTCCCCGCCCGACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAGGGCATT  >  NC_002947/2296704‑2297002                                                                                                                                                      |                                                                                                                                                      tcgtcgATGAACAGCGACTCGATACGCAAGGTGCTGGACGCCATCGACGCCAGGCCCAGGGCCAGGGCCAGCGACACCAGGAAGGTTTCCCCGCCCGACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGC                                                                                                                                                       <  2:222697‑M1/150‑1 (MQ=255)                     gATACGCAAGGTGCTGGACGCCATCGACGCCAGGCCCAGGGCCAGGGCCAGCGACACCAGGAAGGTTTCCCCGCCCGACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTgccgcc                                                                                                                                   >  2:444301/1‑150 (MQ=255)                         cGCAAGGTGCTGGACGCCATCGACGCCAGGCCCAGGGCCAGGGCCAGCGACACCAGGAAGGTTTCCCCGCCCGACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCgcgc                                                                                                                               >  2:273744/1‑150 (MQ=255)                                   tGGACGCCATCGACGCCAGGCCCAGGGCCAGGGCCAGCGACACCAGGAAGGTTTCCCCGCCCGACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGt                                                                                                                     >  1:631741/1‑150 (MQ=255)                                           aTCGACGCCAGGCCCAGGGCCAGGGCCAGCGACACCAGGAAGGTTTCCCCGCCCGACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACgg                                                                                                             >  2:419521/1‑150 (MQ=255)                                              gACGCCAGGCCCAGGGCCAGGGCCAGCGACACCAGGAAGGTTTCCCCGCCCGACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGcc                                                                                                          >  2:324537/1‑150 (MQ=255)                                                 gCCAGGCCCAGGGCCAGGGCCAGCGACCCCAGAACGCTTTTCGCGCCCGACAACGAGTGCACCGAACGCAGTACTTCGCCCATCTCGGTGTCCAGCACCAGCtggcccgtcgctaccgcctcaagcgcggcggcagcgccctgggcctgc                                                                                                       <  1:404922‑M1/150‑49 (MQ=255)                                                        ccagggccagggCCAGCGACACCAGGAAGGTTTCCCCGCCCGACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTa                                                                                                >  1:572052/1‑150 (MQ=255)                                                          agggccagggccAGCGACACCAGGAAGGTTTCCCCGCCCGACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGc                                                                                              <  1:324537/150‑1 (MQ=255)                                                              ccagggccagCGACACCAGGAAGGTTTCCCCGCCCGACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTggg                                                                                          >  2:145512/1‑150 (MQ=255)                                                                        cGACCCCAGGAAGGTTTCCCCGCCCGACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCgtg                                                                                <  1:561376/150‑1 (MQ=255)                                                                               aGGAAGGTTTCCCCGCCCGACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTAGCCTTCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTgcagc                                                                         >  2:755660/1‑150 (MQ=255)                                                                                  aaGGTTTCCCCGCCCGACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTgcagcagc                                                                      <  2:631741/150‑1 (MQ=255)                                                                                          cccgcccgACAACGAGTGCCAAGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAg                                                              >  2:715749/1‑150 (MQ=255)                                                                                          cccgcccgACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAg                                                              >  1:792310/1‑150 (MQ=255)                                                                                           ccgcccgACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAgg                                                             >  1:266585/1‑150 (MQ=255)                                                                                             ccccgACGACGAGCGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGtt                                                           <  2:93047/149‑1 (MQ=255)                                                                                                cgACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTa                                                        >  2:378123/1‑150 (MQ=255)                                                                                                      cGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTgcagcagca                                                                     <  1:278325/131‑1 (MQ=255)                                                                                                      cGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTgcagcagca                                                                     >  2:278325/1‑131 (MQ=255)                                                                                                        aGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTggg                                                >  1:337780/1‑150 (MQ=255)                                                                                                        aGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTggg                                                <  1:419521/150‑1 (MQ=255)                                                                                                         gTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCtggcccgtcgctaccgcctcaagcgcggcggcagcgccctgggcctgctggtg                                                                                                  >  2:703750‑M1/1‑46 (MQ=255)                                                                                                         gTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCtggcccgtcgctaccgcctcaagcgcggcggcagcgccctgggcctgctggtg                                                                                                  <  1:703750‑M1/99‑54 (MQ=255)                                                                                                             aCCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGCCGTAGCTGCGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTCGCCTTGCGCGATc                                           >  2:374005/1‑150 (MQ=255)                                                                                                             aCCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATc                                           <  2:500568/150‑1 (MQ=255)                                                                                                                 aaCGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGTAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGc                                       <  1:396201/150‑1 (MQ=255)                                                                                                                 aaCGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGc                                       >  1:154535/1‑150 (MQ=255)                                                                                                                    gCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGa                                    >  1:2697/1‑150 (MQ=255)                                                                                                                        ttCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAacac                                >  2:70405/1‑150 (MQ=255)                                                                                                                           gtcgCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTgg                                                                                           >  1:405620/1‑88 (MQ=255)                                                                                                                           gtcgCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTgg                                                                                           <  2:405620/88‑1 (MQ=255)                                                                                                                              gCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCAcc                          <  1:70405/150‑1 (MQ=255)                                                                                                                                  aTCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCTCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGCCGTATCTGGGCGTTGGCGTGTTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAg                      <  1:273744/150‑1 (MQ=255)                                                                                                                                   tctcGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGCGGCGGTAGCGACGGGTCTTCTAACGGAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAgg                     <  1:444301/150‑1 (MQ=255)                                                                                                                                    ctcGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGc                    <  1:129659/150‑1 (MQ=255)                                                                                                                                         tgtCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGa                                             <  1:435921/120‑1 (MQ=255)                                                                                                                                         tgtCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGa                                             >  2:435921/1‑120 (MQ=255)                                                                                                                                           tCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCg             >  1:59645/1‑150 (MQ=255)                                                                                                                                             cagcaccagcaGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGAt           >  2:12641/1‑150 (MQ=255)                                                                                                                                              agcaccagcaGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATc          <  1:562082/150‑1 (MQ=255)                                                                                                                                                caccagcaGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAgctggtgctggacaccgagatgggcgacgaactgcgttcggtgcac                                                           <  1:703750‑M2/99‑47 (MQ=255)                                                                                                                                                caccagcaGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAgctggtgctggacaccgagatgggcgacgaactgcgttcggtgcac                                                           >  2:703750‑M2/1‑53 (MQ=255)                                                                                                                                                caccagcaGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAg        <  1:145512/150‑1 (MQ=255)                                                                                                                                                 accagcaGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAgg       <  1:378123/150‑1 (MQ=255)                                                                                                                                                     gcagGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAgctggtgctggacaccgagatgggcgaagtactgcgttcggtgcactcgttgtcgggcgcgaaaagcgttctggggtcgctggccctggccctgggcctggc   <  1:404922‑M2/150‑103 (MQ=255)                                                                                                                                                      cagGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGGCGTGCGCGATCTTGCGGAACACATGACCGGAGGCCGAACCGATCAGGGCAtt  >  1:52796/1‑150 (MQ=255)                                                                                                                                                      cagGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAGGGCAtt  <  2:337780/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                      TCGTCGATGAACAGCGACTCGATACGCAAGGTGCTGGACGCCATCGACGCCAGGCCCAGGGCCAGGGCCAGCGACACCAGGAAGGTTTCCCCGCCCGACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAGGGCATT  >  NC_002947/2296704‑2297002

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.