New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2296853	39 (1.230)	3 (0.100)	3/240	NT	7.1%	coding (3312/3645 nt)	sbcC	exonuclease subunit SbcC
	?	NC_002947	= 2296899	41 (1.340)					coding (3266/3645 nt)	sbcC	exonuclease subunit SbcC

CCAGGGCCAGGGCCAGCGACACCAGGAAGGTTTCCCCGCCCGACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAGGGCATTGAGGCGGGCCCAGCGTTGCCACTGCTGGTGGGCCTGTT  >  NC_002947/2296759‑2297040                                                                                                                                             |                                                                                                                                              ccagggccagggCCAGCGACACCAGGAAGGTTTCCCCGCCCGACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTa                                                                                                                                      >  1:572052/1‑150 (MQ=255)   agggccagggccAGCGACACCAGGAAGGTTTCCCCGCCCGACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGc                                                                                                                                    <  1:324537/150‑1 (MQ=255)       ccagggccagCGACACCAGGAAGGTTTCCCCGCCCGACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTggg                                                                                                                                >  2:145512/1‑150 (MQ=255)                 cGACCCCAGGAAGGTTTCCCCGCCCGACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCgtg                                                                                                                      <  1:561376/150‑1 (MQ=255)                        aGGAAGGTTTCCCCGCCCGACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTAGCCTTCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTgcagc                                                                                                               >  2:755660/1‑150 (MQ=255)                           aaGGTTTCCCCGCCCGACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTgcagcagc                                                                                                            <  2:631741/150‑1 (MQ=255)                                   cccgcccgACAACGAGTGCCAAGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAg                                                                                                    >  2:715749/1‑150 (MQ=255)                                   cccgcccgACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAg                                                                                                    >  1:792310/1‑150 (MQ=255)                                    ccgcccgACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAgg                                                                                                   >  1:266585/1‑150 (MQ=255)                                      ccccgACGACGAGCGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGtt                                                                                                 <  2:93047/149‑1 (MQ=255)                                         cgACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTa                                                                                              >  2:378123/1‑150 (MQ=255)                                               cGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTgcagcagca                                                                                                           >  2:278325/1‑131 (MQ=255)                                               cGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTgcagcagca                                                                                                           <  1:278325/131‑1 (MQ=255)                                                 aGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTggg                                                                                      >  1:337780/1‑150 (MQ=255)                                                 aGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTggg                                                                                      <  1:419521/150‑1 (MQ=255)                                                      aCCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGCCGTAGCTGCGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTCGCCTTGCGCGATc                                                                                 >  2:374005/1‑150 (MQ=255)                                                      aCCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATc                                                                                 <  2:500568/150‑1 (MQ=255)                                                          aaCGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGTAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGc                                                                             <  1:396201/150‑1 (MQ=255)                                                          aaCGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGc                                                                             >  1:154535/1‑150 (MQ=255)                                                             gCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGa                                                                          >  1:2697/1‑150 (MQ=255)                                                                 ttCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAacac                                                                      >  2:70405/1‑150 (MQ=255)                                                                    gtcgCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTgg                                                                                                                                 >  1:405620/1‑88 (MQ=255)                                                                    gtcgCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTgg                                                                                                                                 <  2:405620/88‑1 (MQ=255)                                                                       gCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCAcc                                                                <  1:70405/150‑1 (MQ=255)                                                                           aTCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCTCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGCCGTATCTGGGCGTTGGCGTGTTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAg                                                            <  1:273744/150‑1 (MQ=255)                                                                            tctcGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGCGGCGGTAGCGACGGGTCTTCTAACGGAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAgg                                                           <  1:444301/150‑1 (MQ=255)                                                                             ctcGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGc                                                          <  1:129659/150‑1 (MQ=255)                                                                                  tgtCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGa                                                                                   <  1:435921/120‑1 (MQ=255)                                                                                  tgtCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGa                                                                                   >  2:435921/1‑120 (MQ=255)                                                                                    tCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCg                                                   >  1:59645/1‑150 (MQ=255)                                                                                      cagcaccagcaGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGAt                                                 >  2:12641/1‑150 (MQ=255)                                                                                       agcaccagcaGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATc                                                <  1:562082/150‑1 (MQ=255)                                                                                         caccagcaGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAgctggtgctggacaccgagatgggcgacgaactgcgttcggtgcac                                                                                                 <  1:703750‑M2/99‑47 (MQ=255)                                                                                         caccagcaGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAgctggtgctggacaccgagatgggcgacgaactgcgttcggtgcac                                                                                                 >  2:703750‑M2/1‑53 (MQ=255)                                                                                         caccagcaGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAg                                              <  1:145512/150‑1 (MQ=255)                                                                                          accagcaGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAgg                                             <  1:378123/150‑1 (MQ=255)                                                                                              gcagGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAgctggtgctggacaccgagatgggcgaagtactgcgttcggtgcactcgttgtcgggcgcgaaaagcgttctggggtcgctggccctggccctgggcctggc                                         <  1:404922‑M2/150‑103 (MQ=255)                                                                                               cagGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGGCGTGCGCGATCTTGCGGAACACATGACCGGAGGCCGAACCGATCAGGGCAtt                                        >  1:52796/1‑150 (MQ=255)                                                                                               cagGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAGGGCAtt                                        <  2:337780/150‑1 (MQ=255)                                                                                                    ccAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGAGGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAGGGCATTGAGGc                                   >  1:495090/1‑150 (MQ=255)                                                                                                         gcgcTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAGGGCATTGAGGCGGGcc                              <  2:2697/150‑1 (MQ=255)                                                                                                                cgccgcGCGTCAGGCGGTAGCTACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAGGGCATTGAGGCGGGCCCAGCGtt                       <  2:266585/150‑1 (MQ=255)                                                                                                                       cTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAGGGCATTGAGGCGGGCCCAGCGTTGCCActg                <  1:755660/150‑1 (MQ=255)                                                                                                                                gTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAGGGCATTGAGGCGGGCCCAGCGTTGCCACTGCTGGTGGGc       <  1:715749/150‑1 (MQ=255)                                                                                                                                     gACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAGGGCATTGAGGCGGGCCCAGCGTTGCCACTGCTGGTGGGCCTGtt  <  2:154535/150‑1 (MQ=255)                                                                                                                                             |                                                                                                                                              CCAGGGCCAGGGCCAGCGACACCAGGAAGGTTTCCCCGCCCGACAACGAGTGCACCGAACGCAGTTCGTCGCCCATCTCGGTGTCCAGCACCAGCAGGCCCAGGGCGCTGCCGCCGCGCTTGAGGCGGTAGCGACGGGCCAGCTGACGTAGCTGGGCGTTGGCGTGGTGCAGCAGCAGGTCAAGGTTGTAGCCTTGGGCGATCTTGCGGAACACATCACCGGAGGCCGAACCGATCAGGGCATTGAGGCGGGCCCAGCGTTGCCACTGCTGGTGGGCCTGTT  >  NC_002947/2296759‑2297040

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.